RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 CYSLTR1Q9Y271 337 aa12.11□□□□□ -0.47
SSH3-209ENST00000532600 LINC00959A0A1B0GUT2 108 aa12.1□□□□□ -0.47
SSH3-209ENST00000532600 GAGE12HA6NDE8 117 aa12.1□□□□□ -0.47
SSH3-209ENST00000532600 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
SSH3-209ENST00000532600 MRPS36P82909 103 aaKnown RBP12.1□□□□□ -0.47
SSH3-209ENST00000532600 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
SSH3-209ENST00000532600 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
SSH3-209ENST00000532600 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
SSH3-209ENST00000532600 A0A096LNJ9 63 aa12.09□□□□□ -0.47
SSH3-209ENST00000532600 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
SSH3-209ENST00000532600 CHCHD10Q8WYQ3 142 aaPredicted RBP12.09□□□□□ -0.47
SSH3-209ENST00000532600 TOMM6Q96B49 74 aa12.09□□□□□ -0.47
SSH3-209ENST00000532600 SMAGPQ0VAQ4 97 aa12.08□□□□□ -0.48
SSH3-209ENST00000532600 ZC2HC1BQ5TFG8 222 aa12.08□□□□□ -0.48
SSH3-209ENST00000532600 LINC00614P0C842 121 aa12.07□□□□□ -0.48
SSH3-209ENST00000532600 AP5S1Q9NUS5 200 aa12.07□□□□□ -0.48
SSH3-209ENST00000532600 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
SSH3-209ENST00000532600 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
SSH3-209ENST00000532600 PMCHL1Q16048 86 aa12.06□□□□□ -0.48
SSH3-209ENST00000532600 LINC00173Q6ZV60 143 aa12.06□□□□□ -0.48
SSH3-209ENST00000532600 TRAV13-1A0A0B4J241 112 aa12.05□□□□□ -0.48
SSH3-209ENST00000532600 CCL25O15444 150 aa12.05□□□□□ -0.48
SSH3-209ENST00000532600 XCL1P47992 114 aa12.05□□□□□ -0.48
SSH3-209ENST00000532600 LINC00310P59036 64 aa12.05□□□□□ -0.48
SSH3-209ENST00000532600 FOXI1Q12951 378 aa12.05□□□□□ -0.48
SSH3-209ENST00000532600 IGHV3-64A0A075B6Q5 118 aa12.04□□□□□ -0.48
SSH3-209ENST00000532600 HIGD2BQ4VC39 106 aa12.04□□□□□ -0.48
SSH3-209ENST00000532600 TMEM141Q96I45 108 aa12.03□□□□□ -0.48
SSH3-209ENST00000532600 AMELXQ99217 191 aa12.03□□□□□ -0.48
SSH3-209ENST00000532600 TIMM17AQ99595 171 aa12.03□□□□□ -0.48
SSH3-209ENST00000532600 IFITM10A6NMD0 228 aa12.02□□□□□ -0.49
SSH3-209ENST00000532600 SS18Q15532 418 aa12.02□□□□□ -0.49
SSH3-209ENST00000532600 SPACA4Q8TDM5 124 aa12.02□□□□□ -0.49
SSH3-209ENST00000532600 SCGB3A1Q96QR1 104 aa12.02□□□□□ -0.49
SSH3-209ENST00000532600 GVQW2A0A096LPI5 108 aaPredicted RBP12.01□□□□□ -0.49
SSH3-209ENST00000532600 G0S2P27469 103 aa12.01□□□□□ -0.49
SSH3-209ENST00000532600 RAB5BP61020 215 aa12.01□□□□□ -0.49
SSH3-209ENST00000532600 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
SSH3-209ENST00000532600 ERASQ7Z444 233 aa12.01□□□□□ -0.49
SSH3-209ENST00000532600 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
SSH3-209ENST00000532600 A0A087WYN8 130 aa12□□□□□ -0.49
SSH3-209ENST00000532600 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
SSH3-209ENST00000532600 C1orf196B1AJZ1 125 aa12□□□□□ -0.49
SSH3-209ENST00000532600 NPSP0C0P6 89 aa12□□□□□ -0.49
SSH3-209ENST00000532600 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
SSH3-209ENST00000532600 CFAP161Q6P656 301 aa12□□□□□ -0.49
SSH3-209ENST00000532600 CHCHD1Q96BP2 118 aaKnown RBP12□□□□□ -0.49
SSH3-209ENST00000532600 NUPR1O60356 82 aa11.99□□□□□ -0.49
SSH3-209ENST00000532600 OXTP01178 125 aa11.99□□□□□ -0.49
SSH3-209ENST00000532600 HBDP02042 147 aa11.99□□□□□ -0.49
SSH3-209ENST00000532600 UBE2D1P51668 147 aa11.99□□□□□ -0.49
SSH3-209ENST00000532600 TEX43Q6ZNM6 134 aa11.99□□□□□ -0.49
SSH3-209ENST00000532600 BAGE3Q86Y29 109 aa11.99□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BKO60814 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 SERF1AO75920 110 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BJP06899 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BOP23527 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BBP33778 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BDP58876 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BCP62807 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 COX6A2Q02221 97 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST2H2BEQ16778 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.98□□□□□ -0.49
SSH3-209ENST00000532600 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BHQ93079 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BNQ99877 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 HIST1H2BMQ99879 126 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 VCX2Q9H322 139 aa11.98□□□□□ -0.49
SSH3-209ENST00000532600 Q6ZN92 141 aa11.97□□□□□ -0.49
SSH3-209ENST00000532600 PLAC8Q9NZF1 115 aa11.97□□□□□ -0.49
SSH3-209ENST00000532600 IGHV3OR16-9A0A0B4J2B5 98 aa11.96□□□□□ -0.49
SSH3-209ENST00000532600 C5orf38Q86SI9 138 aa11.96□□□□□ -0.49
SSH3-209ENST00000532600 FAM19A2Q8N3H0 131 aa11.96□□□□□ -0.49
SSH3-209ENST00000532600 LINC00526Q96FQ7 95 aa11.96□□□□□ -0.49
SSH3-209ENST00000532600 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
SSH3-209ENST00000532600 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
SSH3-209ENST00000532600 CST9LQ9H4G1 147 aa11.94□□□□□ -0.5
SSH3-209ENST00000532600 COX7A2LO14548 114 aa11.93□□□□□ -0.5
SSH3-209ENST00000532600 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
SSH3-209ENST00000532600 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
SSH3-209ENST00000532600 DPH3Q96FX2 82 aa11.93□□□□□ -0.5
SSH3-209ENST00000532600 A0A096LNI7 61 aa11.92□□□□□ -0.5
SSH3-209ENST00000532600 IGKV2-24A0A0C4DH68 120 aa11.92□□□□□ -0.5
SSH3-209ENST00000532600 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.92□□□□□ -0.5
SSH3-209ENST00000532600 HSBP1O75506 76 aa11.92□□□□□ -0.5
SSH3-209ENST00000532600 IGHV1-58A0A0C4DH39 117 aa11.91□□□□□ -0.5
SSH3-209ENST00000532600 A0A0J9YXV3 536 aa11.91□□□□□ -0.5
SSH3-209ENST00000532600 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
SSH3-209ENST00000532600 MT1HL1P0DM35 61 aa11.9□□□□□ -0.5
SSH3-209ENST00000532600 PMVKQ15126 192 aa11.9□□□□□ -0.5
SSH3-209ENST00000532600 A0A087WZ39 114 aa11.89□□□□□ -0.51
SSH3-209ENST00000532600 ATP5LO75964 103 aa11.89□□□□□ -0.51
SSH3-209ENST00000532600 MALP21145 153 aa11.88□□□□□ -0.51
SSH3-209ENST00000532600 STPG4Q8N801 248 aa11.87□□□□□ -0.51
SSH3-209ENST00000532600 IFI27L1Q96BM0 104 aa11.87□□□□□ -0.51
SSH3-209ENST00000532600 CARD19Q96LW7 228 aa11.87□□□□□ -0.51
SSH3-209ENST00000532600 IGLV4-69A0A075B6H9 119 aa11.86□□□□□ -0.51
SSH3-209ENST00000532600 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
SSH3-209ENST00000532600 NDUFA6P56556 154 aa11.86□□□□□ -0.51
SSH3-209ENST00000532600 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms