RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 KIR2DL5BQ8NHK3 375 aa12.17□□□□□ -0.46
BRCA2-204ENST00000530893 LINC01600Q96MT4 127 aa12.17□□□□□ -0.46
BRCA2-204ENST00000530893 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
BRCA2-204ENST00000530893 BAHCC1Q9P281 2608 aa12.17□□□□□ -0.46
BRCA2-204ENST00000530893 PPDPFQ9H3Y8 114 aa12.16□□□□□ -0.46
BRCA2-204ENST00000530893 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
BRCA2-204ENST00000530893 UNC79Q9P2D8 2635 aa12.16□□□□□ -0.46
BRCA2-204ENST00000530893 TRIAP1O43715 76 aa12.16□□□□□ -0.46
BRCA2-204ENST00000530893 SCGB1A1P11684 91 aa12.15□□□□□ -0.46
BRCA2-204ENST00000530893 KRTAP10-3P60369 221 aa12.15□□□□□ -0.46
BRCA2-204ENST00000530893 ZNF625Q96I27 306 aaPredicted RBP12.15□□□□□ -0.46
BRCA2-204ENST00000530893 TRBV6-8A0A0A6YYG3 113 aa12.15□□□□□ -0.47
BRCA2-204ENST00000530893 LOC100131303A0A0U1RQF7 123 aa12.15□□□□□ -0.47
BRCA2-204ENST00000530893 C9JAW5 83 aa12.15□□□□□ -0.47
BRCA2-204ENST00000530893 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.47
BRCA2-204ENST00000530893 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
BRCA2-204ENST00000530893 LINC01620Q4KN68 170 aa12.14□□□□□ -0.47
BRCA2-204ENST00000530893 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
BRCA2-204ENST00000530893 SMR3AQ99954 134 aa12.14□□□□□ -0.47
BRCA2-204ENST00000530893 NPC2P61916 151 aa12.13□□□□□ -0.47
BRCA2-204ENST00000530893 PRIMA1Q86XR5 153 aa12.13□□□□□ -0.47
BRCA2-204ENST00000530893 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
BRCA2-204ENST00000530893 ANKRD29Q8N6D5 301 aa12.13□□□□□ -0.47
BRCA2-204ENST00000530893 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
BRCA2-204ENST00000530893 HIVEP2P31629 2446 aa12.13□□□□□ -0.47
BRCA2-204ENST00000530893 NIPBLQ6KC79 2804 aaeCLIP12.12□□□□□ -0.47
BRCA2-204ENST00000530893 LY6G6DO95868 133 aa12.11□□□□□ -0.47
BRCA2-204ENST00000530893 DAND5Q8N907 189 aa12.11□□□□□ -0.47
BRCA2-204ENST00000530893 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
BRCA2-204ENST00000530893 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
BRCA2-204ENST00000530893 CRLF1O75462 422 aa12.1□□□□□ -0.47
BRCA2-204ENST00000530893 RPL13AP40429 203 aaKnown RBP12.1□□□□□ -0.47
BRCA2-204ENST00000530893 MEIG1Q5JSS6 88 aa12.1□□□□□ -0.47
BRCA2-204ENST00000530893 HECTD1Q9ULT8 2610 aa12.09□□□□□ -0.47
BRCA2-204ENST00000530893 GAGE6Q13070 117 aa12.09□□□□□ -0.47
BRCA2-204ENST00000530893 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
BRCA2-204ENST00000530893 CHCHD5Q9BSY4 110 aa12.08□□□□□ -0.48
BRCA2-204ENST00000530893 DEFB130BP0DP73 79 aa12.08□□□□□ -0.48
BRCA2-204ENST00000530893 DEFB130AP0DP74 79 aa12.08□□□□□ -0.48
BRCA2-204ENST00000530893 TMEM262E9PQX1 116 aa12.07□□□□□ -0.48
BRCA2-204ENST00000530893 X6R8D5 127 aa12.07□□□□□ -0.48
BRCA2-204ENST00000530893 H3BT86 120 aa12.06□□□□□ -0.48
BRCA2-204ENST00000530893 LST1O00453 97 aa12.06□□□□□ -0.48
BRCA2-204ENST00000530893 COX7B2Q8TF08 81 aa12.06□□□□□ -0.48
BRCA2-204ENST00000530893 CDIP1Q9H305 208 aa12.06□□□□□ -0.48
BRCA2-204ENST00000530893 IGLV4-60A0A075B6I1 120 aa12.06□□□□□ -0.48
BRCA2-204ENST00000530893 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
BRCA2-204ENST00000530893 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
BRCA2-204ENST00000530893 SOSTDC1Q6X4U4 206 aa12.04□□□□□ -0.48
BRCA2-204ENST00000530893 PRO0255Q9UI72 69 aa12.04□□□□□ -0.48
BRCA2-204ENST00000530893 A0A087WZ39 114 aa12.04□□□□□ -0.48
BRCA2-204ENST00000530893 A0A0U1RRA0 63 aa12.03□□□□□ -0.48
BRCA2-204ENST00000530893 A0A1B0GUV1 79 aa12.03□□□□□ -0.48
BRCA2-204ENST00000530893 GYPEP15421 78 aa12.03□□□□□ -0.48
BRCA2-204ENST00000530893 C2CD3Q4AC94 2353 aa12.03□□□□□ -0.48
BRCA2-204ENST00000530893 SHISA2Q6UWI4 295 aa12.03□□□□□ -0.48
BRCA2-204ENST00000530893 NTN5Q8WTR8 489 aaPredicted RBP12.03□□□□□ -0.48
BRCA2-204ENST00000530893 C2orf82Q6UX34 121 aa12.02□□□□□ -0.49
BRCA2-204ENST00000530893 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
BRCA2-204ENST00000530893 COX7A2LO14548 114 aa12.01□□□□□ -0.49
BRCA2-204ENST00000530893 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
BRCA2-204ENST00000530893 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
BRCA2-204ENST00000530893 APOC4P55056 127 aa12□□□□□ -0.49
BRCA2-204ENST00000530893 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
BRCA2-204ENST00000530893 INAFM1C9JVW0 142 aa11.99□□□□□ -0.49
BRCA2-204ENST00000530893 UBE2WQ96B02 151 aa11.99□□□□□ -0.49
BRCA2-204ENST00000530893 TRAV13-2A0A0B4J235 113 aa11.99□□□□□ -0.49
BRCA2-204ENST00000530893 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
BRCA2-204ENST00000530893 FLNBO75369 2602 aaKnown RBP11.98□□□□□ -0.49
BRCA2-204ENST00000530893 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
BRCA2-204ENST00000530893 LINC01561Q8N1V8 128 aa11.98□□□□□ -0.49
BRCA2-204ENST00000530893 SS18Q15532 418 aa11.97□□□□□ -0.49
BRCA2-204ENST00000530893 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
BRCA2-204ENST00000530893 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.49
BRCA2-204ENST00000530893 PAX4O43316 350 aa11.96□□□□□ -0.49
BRCA2-204ENST00000530893 XGP55808 180 aa11.96□□□□□ -0.5
BRCA2-204ENST00000530893 CITED1Q99966 193 aa11.95□□□□□ -0.5
BRCA2-204ENST00000530893 C5orf38Q86SI9 138 aa11.94□□□□□ -0.5
BRCA2-204ENST00000530893 TRACP01848 142 aa11.94□□□□□ -0.5
BRCA2-204ENST00000530893 CRPP02741 224 aa11.94□□□□□ -0.5
BRCA2-204ENST00000530893 LINC00158P58513 81 aa11.94□□□□□ -0.5
BRCA2-204ENST00000530893 DEFB135Q30KP9 77 aa11.94□□□□□ -0.5
BRCA2-204ENST00000530893 SPATA3Q8NHX4 192 aa11.94□□□□□ -0.5
BRCA2-204ENST00000530893 SND1-IT1Q9HBX3 110 aa11.94□□□□□ -0.5
BRCA2-204ENST00000530893 MT-ATP8P03928 68 aa11.93□□□□□ -0.5
BRCA2-204ENST00000530893 RPL28P46779 137 aaKnown RBP11.93□□□□□ -0.5
BRCA2-204ENST00000530893 DEFB121Q5J5C9 76 aa11.93□□□□□ -0.5
BRCA2-204ENST00000530893 TRAV26-1A0A087WT03 109 aa11.93□□□□□ -0.5
BRCA2-204ENST00000530893 MIFP14174 115 aa11.93□□□□□ -0.5
BRCA2-204ENST00000530893 Q8IZM0 81 aa11.93□□□□□ -0.5
BRCA2-204ENST00000530893 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
BRCA2-204ENST00000530893 IGHV4-28A0A0C4DH34 117 aa11.91□□□□□ -0.5
BRCA2-204ENST00000530893 C6orf226Q5I0X4 101 aa11.91□□□□□ -0.5
BRCA2-204ENST00000530893 FN1P02751 2386 aaKnown RBP11.91□□□□□ -0.5
BRCA2-204ENST00000530893 XCL1P47992 114 aa11.91□□□□□ -0.5
BRCA2-204ENST00000530893 DAD1P61803 113 aa11.91□□□□□ -0.5
BRCA2-204ENST00000530893 OTOGQ6ZRI0 2925 aa11.91□□□□□ -0.5
BRCA2-204ENST00000530893 FAM240AA0A1B0GVK7 77 aa11.9□□□□□ -0.5
BRCA2-204ENST00000530893 WIPF1O43516 503 aa11.9□□□□□ -0.5
BRCA2-204ENST00000530893 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms