RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 NUDT11Q96G61 164 aa10.35□□□□□ -0.75
LTBP3-211ENST00000528966 C6orf48Q9UBA6 75 aa10.35□□□□□ -0.75
LTBP3-211ENST00000528966 SRP19P09132 144 aaKnown RBP10.34□□□□□ -0.75
LTBP3-211ENST00000528966 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
LTBP3-211ENST00000528966 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
LTBP3-211ENST00000528966 C9JQL5 133 aa10.33□□□□□ -0.76
LTBP3-211ENST00000528966 F8W036 122 aa10.33□□□□□ -0.76
LTBP3-211ENST00000528966 TMEM250H0YL14 139 aa10.33□□□□□ -0.76
LTBP3-211ENST00000528966 NDUFA1O15239 70 aa10.33□□□□□ -0.76
LTBP3-211ENST00000528966 POLR2KP53803 58 aaKnown RBP10.33□□□□□ -0.76
LTBP3-211ENST00000528966 SMIM15Q7Z3B0 74 aa10.33□□□□□ -0.76
LTBP3-211ENST00000528966 ST20Q9HBF5 79 aa10.33□□□□□ -0.76
LTBP3-211ENST00000528966 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
LTBP3-211ENST00000528966 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
LTBP3-211ENST00000528966 F8WDY8 70 aa10.32□□□□□ -0.76
LTBP3-211ENST00000528966 LINC01547P58512 204 aaPredicted RBP10.32□□□□□ -0.76
LTBP3-211ENST00000528966 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
LTBP3-211ENST00000528966 PDE6DO43924 150 aa10.31□□□□□ -0.76
LTBP3-211ENST00000528966 CRYGAP11844 174 aa10.31□□□□□ -0.76
LTBP3-211ENST00000528966 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
LTBP3-211ENST00000528966 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
LTBP3-211ENST00000528966 Q6ZUT4 128 aa10.31□□□□□ -0.76
LTBP3-211ENST00000528966 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
LTBP3-211ENST00000528966 SVBPQ8N300 66 aa10.3□□□□□ -0.76
LTBP3-211ENST00000528966 BIN3Q9NQY0 253 aa10.3□□□□□ -0.76
LTBP3-211ENST00000528966 APOC3P02656 99 aa10.29□□□□□ -0.76
LTBP3-211ENST00000528966 FAM74A3Q4VXF1 159 aa10.29□□□□□ -0.76
LTBP3-211ENST00000528966 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
LTBP3-211ENST00000528966 KRTAP13-2Q52LG2 175 aa10.28□□□□□ -0.76
LTBP3-211ENST00000528966 IGHV3OR16-9A0A0B4J2B5 98 aa10.27□□□□□ -0.77
LTBP3-211ENST00000528966 SNAPINO95295 136 aa10.27□□□□□ -0.77
LTBP3-211ENST00000528966 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.77
LTBP3-211ENST00000528966 PNRC1Q12796 327 aaPredicted RBP10.26□□□□□ -0.77
LTBP3-211ENST00000528966 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
LTBP3-211ENST00000528966 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
LTBP3-211ENST00000528966 K7EN84 100 aa10.25□□□□□ -0.77
LTBP3-211ENST00000528966 NUPR1O60356 82 aa10.25□□□□□ -0.77
LTBP3-211ENST00000528966 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
LTBP3-211ENST00000528966 FCER1GP30273 86 aa10.24□□□□□ -0.77
LTBP3-211ENST00000528966 CEBPGP53567 150 aa10.24□□□□□ -0.77
LTBP3-211ENST00000528966 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
LTBP3-211ENST00000528966 KRTAP4-1Q9BYQ7 146 aa10.24□□□□□ -0.77
LTBP3-211ENST00000528966 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
LTBP3-211ENST00000528966 SMAGPQ0VAQ4 97 aa10.23□□□□□ -0.77
LTBP3-211ENST00000528966 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
LTBP3-211ENST00000528966 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
LTBP3-211ENST00000528966 SMIM7Q9BQ49 75 aa10.23□□□□□ -0.77
LTBP3-211ENST00000528966 TIMM21Q9BVV7 248 aa10.23□□□□□ -0.77
LTBP3-211ENST00000528966 NAT8Q9UHE5 227 aa10.23□□□□□ -0.77
LTBP3-211ENST00000528966 RHEBQ15382 184 aa10.22□□□□□ -0.77
LTBP3-211ENST00000528966 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
LTBP3-211ENST00000528966 VCYO14598 125 aa10.21□□□□□ -0.77
LTBP3-211ENST00000528966 RPL28P46779 137 aaKnown RBP10.21□□□□□ -0.77
LTBP3-211ENST00000528966 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
LTBP3-211ENST00000528966 TRBV30A0A0K0K1B3 111 aa10.2□□□□□ -0.78
LTBP3-211ENST00000528966 RAB4AP20338 218 aa10.2□□□□□ -0.78
LTBP3-211ENST00000528966 C2orf82Q6UX34 121 aa10.2□□□□□ -0.78
LTBP3-211ENST00000528966 OCC1Q8TAD7 63 aa10.2□□□□□ -0.78
LTBP3-211ENST00000528966 SMKR1H3BMG3 65 aa10.19□□□□□ -0.78
LTBP3-211ENST00000528966 LINC00242Q5T6M2 205 aa10.19□□□□□ -0.78
LTBP3-211ENST00000528966 TMEM191AQ9H0A3 160 aa10.19□□□□□ -0.78
LTBP3-211ENST00000528966 BCE1O60756 84 aa10.18□□□□□ -0.78
LTBP3-211ENST00000528966 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
LTBP3-211ENST00000528966 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
LTBP3-211ENST00000528966 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
LTBP3-211ENST00000528966 RPL39P62891 51 aaKnown RBP10.17□□□□□ -0.78
LTBP3-211ENST00000528966 NRACQ8N912 160 aa10.17□□□□□ -0.78
LTBP3-211ENST00000528966 KIR2DL4Q99706 377 aa10.17□□□□□ -0.78
LTBP3-211ENST00000528966 RPL23P62829 140 aaKnown RBP10.16□□□□□ -0.78
LTBP3-211ENST00000528966 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
LTBP3-211ENST00000528966 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
LTBP3-211ENST00000528966 A8MWL6 223 aa10.15□□□□□ -0.78
LTBP3-211ENST00000528966 GATCO43716 136 aaKnown RBP10.15□□□□□ -0.78
LTBP3-211ENST00000528966 MT-ND4LP03901 98 aa10.15□□□□□ -0.78
LTBP3-211ENST00000528966 ADIRFQ15847 76 aa10.15□□□□□ -0.78
LTBP3-211ENST00000528966 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
LTBP3-211ENST00000528966 LINC00469Q8N7U9 141 aa10.15□□□□□ -0.78
LTBP3-211ENST00000528966 TMEM18Q96B42 140 aa10.15□□□□□ -0.78
LTBP3-211ENST00000528966 SMCO4Q9NRQ5 59 aa10.15□□□□□ -0.78
LTBP3-211ENST00000528966 SCO1O75880 301 aa10.14□□□□□ -0.79
LTBP3-211ENST00000528966 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
LTBP3-211ENST00000528966 PACRGQ96M98 296 aaPredicted RBP10.14□□□□□ -0.79
LTBP3-211ENST00000528966 A0A1B0GUT8 65 aa10.13□□□□□ -0.79
LTBP3-211ENST00000528966 IFITM10A6NMD0 228 aa10.13□□□□□ -0.79
LTBP3-211ENST00000528966 PPP1R2P9O14990 202 aa10.13□□□□□ -0.79
LTBP3-211ENST00000528966 ANAPC16Q96DE5 110 aa10.13□□□□□ -0.79
LTBP3-211ENST00000528966 XAGE1AQ9HD64 81 aa10.13□□□□□ -0.79
LTBP3-211ENST00000528966 TGIF2-C20orf24A0A0A6YYL0 155 aa10.12□□□□□ -0.79
LTBP3-211ENST00000528966 CTAG1AP78358 180 aa10.12□□□□□ -0.79
LTBP3-211ENST00000528966 MRPS36P82909 103 aaKnown RBP10.12□□□□□ -0.79
LTBP3-211ENST00000528966 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
LTBP3-211ENST00000528966 BORCS7Q96B45 105 aa10.12□□□□□ -0.79
LTBP3-211ENST00000528966 HBBP68871 147 aa10.11□□□□□ -0.79
LTBP3-211ENST00000528966 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
LTBP3-211ENST00000528966 FAM231DQ6ZW35 169 aa10.11□□□□□ -0.79
LTBP3-211ENST00000528966 KRTAP13-1Q8IUC0 172 aa10.11□□□□□ -0.79
LTBP3-211ENST00000528966 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
LTBP3-211ENST00000528966 HIGD1CA8MV81 97 aa10.1□□□□□ -0.79
LTBP3-211ENST00000528966 PPP1R17O96001 155 aa10.1□□□□□ -0.79
LTBP3-211ENST00000528966 KRTAP13-3Q3SY46 172 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms