RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 Q9H8V8 135 aa8.27□□□□□ -1.09
PTPRK-216ENST00000524481 ANGP03950 147 aaKnown RBP8.26□□□□□ -1.09
PTPRK-216ENST00000524481 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 LINC00242Q5T6M2 205 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 MUSTN1Q8IVN3 82 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 IL17DQ8TAD2 202 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 PYGO1Q9Y3Y4 419 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 LEPROTO15243 131 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 AMELXQ99217 191 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 CDC42SE2Q9NRR3 84 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 HIGD1BQ9P298 99 aa8.26□□□□□ -1.09
PTPRK-216ENST00000524481 A4D1N5 150 aa8.25□□□□□ -1.09
PTPRK-216ENST00000524481 ATP5G1P05496 136 aa8.25□□□□□ -1.09
PTPRK-216ENST00000524481 UBE2D1P51668 147 aa8.25□□□□□ -1.09
PTPRK-216ENST00000524481 CRYBA4P53673 196 aa8.25□□□□□ -1.09
PTPRK-216ENST00000524481 MRPS36P82909 103 aaKnown RBP8.25□□□□□ -1.09
PTPRK-216ENST00000524481 H3BMG7 143 aa8.25□□□□□ -1.09
PTPRK-216ENST00000524481 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 PFN2P35080 140 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 WFDC9Q8NEX5 89 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 A0A1W2PPM0 123 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 A6NJY4 79 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
PTPRK-216ENST00000524481 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 TEX48A0A1B0GUV7 120 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 PTH2Q96A98 100 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 TM2D2Q9BX73 214 aa8.23□□□□□ -1.09
PTPRK-216ENST00000524481 IGLL5B9A064 214 aa8.22□□□□□ -1.09
PTPRK-216ENST00000524481 HERVK_113P63121 156 aa8.22□□□□□ -1.09
PTPRK-216ENST00000524481 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
PTPRK-216ENST00000524481 KIR2DL5BQ8NHK3 375 aa8.22□□□□□ -1.09
PTPRK-216ENST00000524481 SMIM9A6NGZ8 99 aa8.22□□□□□ -1.09
PTPRK-216ENST00000524481 K7EP34 96 aa8.22□□□□□ -1.09
PTPRK-216ENST00000524481 NANOS2P60321 138 aaKnown RBP8.21□□□□□ -1.1
PTPRK-216ENST00000524481 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.1
PTPRK-216ENST00000524481 Q6ZTC4 211 aa8.21□□□□□ -1.1
PTPRK-216ENST00000524481 SIGMAR1Q99720 223 aa8.21□□□□□ -1.1
PTPRK-216ENST00000524481 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-216ENST00000524481 LINC00158P58513 81 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 Q8NAQ8 132 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 RNF183Q96D59 192 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 EDA2RQ9HAV5 297 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 STAB2Q8WWQ8 2551 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 MIFP14174 115 aa8.2□□□□□ -1.1
PTPRK-216ENST00000524481 CIRBPQ14011 172 aaKnown RBP8.2□□□□□ -1.1
PTPRK-216ENST00000524481 J3QR89 54 aa8.19□□□□□ -1.1
PTPRK-216ENST00000524481 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
PTPRK-216ENST00000524481 CFC1P0CG37 223 aa8.19□□□□□ -1.1
PTPRK-216ENST00000524481 ETDBQ3ZM63 59 aa8.19□□□□□ -1.1
PTPRK-216ENST00000524481 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
PTPRK-216ENST00000524481 MALP21145 153 aa8.18□□□□□ -1.1
PTPRK-216ENST00000524481 C2orf82Q6UX34 121 aa8.18□□□□□ -1.1
PTPRK-216ENST00000524481 TAL2Q16559 108 aa8.18□□□□□ -1.1
PTPRK-216ENST00000524481 UBE2WQ96B02 151 aa8.18□□□□□ -1.1
PTPRK-216ENST00000524481 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
PTPRK-216ENST00000524481 MRPL23Q16540 153 aaKnown RBP8.17□□□□□ -1.1
PTPRK-216ENST00000524481 A0A1B0GV72 72 aa8.17□□□□□ -1.1
PTPRK-216ENST00000524481 WFDC2Q14508 124 aa8.17□□□□□ -1.1
PTPRK-216ENST00000524481 SS18Q15532 418 aa8.17□□□□□ -1.1
PTPRK-216ENST00000524481 SBSPONQ8IVN8 264 aa8.17□□□□□ -1.1
PTPRK-216ENST00000524481 PRO1854Q9UHT4 67 aa8.17□□□□□ -1.1
PTPRK-216ENST00000524481 ERG28Q9UKR5 140 aa8.16□□□□□ -1.1
PTPRK-216ENST00000524481 LINC00959A0A1B0GUT2 108 aa8.16□□□□□ -1.1
PTPRK-216ENST00000524481 TENM2Q9NT68 2774 aa8.16□□□□□ -1.1
PTPRK-216ENST00000524481 TSPAN13O95857 204 aa8.16□□□□□ -1.1
PTPRK-216ENST00000524481 TIRAPP58753 221 aa8.15□□□□□ -1.1
PTPRK-216ENST00000524481 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.11
PTPRK-216ENST00000524481 CKS1BP61024 79 aa8.15□□□□□ -1.11
PTPRK-216ENST00000524481 ICOSQ9Y6W8 199 aa8.15□□□□□ -1.11
PTPRK-216ENST00000524481 A0A1B0GWB2 263 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 KPRPQ5T749 579 aaPredicted RBP8.14□□□□□ -1.11
PTPRK-216ENST00000524481 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 REG3AQ06141 175 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 C11orf45Q8TAV5 145 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 Q9HAA7 133 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 ZFAND6Q6FIF0 208 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 MDFIQ99750 246 aa8.14□□□□□ -1.11
PTPRK-216ENST00000524481 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
PTPRK-216ENST00000524481 MIR7-3HGQ8N6C7 128 aa8.13□□□□□ -1.11
PTPRK-216ENST00000524481 C9orf116Q5BN46 136 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-216ENST00000524481 CHCHD10Q8WYQ3 142 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-216ENST00000524481 CSDC2Q9Y534 153 aaKnown RBP8.12□□□□□ -1.11
PTPRK-216ENST00000524481 WFDC10BQ8IUB3 73 aa8.12□□□□□ -1.11
PTPRK-216ENST00000524481 CRPP02741 224 aa8.11□□□□□ -1.11
PTPRK-216ENST00000524481 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
PTPRK-216ENST00000524481 CFAP161Q6P656 301 aa8.1□□□□□ -1.11
PTPRK-216ENST00000524481 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms