RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 ITPR1Q14643 2758 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3OR16-8A0A075B7F1 116 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 A0A0B4J2C4 111 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV7-4-1A0A0J9YVY3 117 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 A0A0U1RQV1 116 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 KNCNA6PVL3 124 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 BCE1O60756 84 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 PLNP26678 52 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 FCER1GP30273 86 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 ZNF80P51504 273 aaPredicted RBP2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 BLCAPP62952 87 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 DEFB113Q30KQ7 82 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 DEFB112Q30KQ8 113 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 C9orf66Q5T8R8 295 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 MRPL55Q7Z7F7 128 aaKnown RBP2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 GPHB5Q86YW7 130 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 PRR15Q8IV56 129 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 ORMDL3Q8N138 153 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 RNF182Q8N6D2 247 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 Q8N8P6 123 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 KLHL30-AS1Q8NEE0 82 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 Q8TAT8 98 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 DAZ1Q9NQZ3 744 aaKnown RBP2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 PRO1854Q9UHT4 67 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 NCOR2Q9Y618 2525 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 CACNA1BQ00975 2339 aa2.36□□□□□ -2.03
LINCR-0001-203ENST00000524047 PKD1L2Q7Z442 2459 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 TRAV21A0A0B4J279 112 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3-66A0A0C4DH42 116 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 TRBV7-6A0A0J9YX20 115 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 TEX49A0A1B0GTD5 131 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 RPL37AP8A6NKH3 93 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 D6R8Y8 96 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 TRBV12-3P01733 135 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 PRB1P04280 392 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 CKS2P33552 79 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 SYNJ2BPP57105 145 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 ERCC8Q13216 396 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 MRPL51Q4U2R6 128 aaKnown RBP2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 C2orf82Q6UX34 121 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 UNQ9165/PRO28630Q6UXU0 137 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 Q6ZVQ6 151 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 CSNK1G2-AS1Q8NCQ2 148 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 BRK1Q8WUW1 75 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 RHPN1-AS1Q9BWJ2 59 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 CELA1Q9UNI1 258 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 DOPEY1Q5JWR5 2465 aa2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 ANKRD17O75179 2603 aaKnown RBP2.35□□□□□ -2.03
LINCR-0001-203ENST00000524047 CHD8Q9HCK8 2581 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 AKAP6Q13023 2319 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3OR16-13A0A075B7E8 117 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3-49A0A0A0MS15 119 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3-74A0A0B4J1X5 117 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 TRAV12-1A0A0B4J245 112 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3-16A0A0C4DH30 117 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 TRBV30A0A0K0K1B3 111 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 PLAC8L1A1L4L8 177 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 K7EMI3 77 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3-11P01762 117 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 IGHV3-33P01772 117 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 SNRPD3P62318 126 aaKnown RBP2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 Q8N2B8 174 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 DAND5Q8N907 189 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 WFDC11Q8NEX6 87 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 DCANP1Q8TF63 244 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 RNF185Q96GF1 192 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 UBE2E2Q96LR5 201 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 FOXC2Q99958 501 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 TIMM8BQ9Y5J9 83 aaPredicted RBP2.34□□□□□ -2.03
LINCR-0001-203ENST00000524047 MED13LQ71F56 2210 aa2.34□□□□□ -2.04
LINCR-0001-203ENST00000524047 MUC4Q99102 2169 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 K7EQG2 157 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 M0R381 172 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 PPP1R17O96001 155 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 PRB4P10163 310 aaPredicted RBP2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 S100A4P26447 101 aaKnown RBP2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 DAZ2Q13117 558 aaKnown RBP2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 SPANXN1Q5VSR9 72 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 FP248Q71RG6 208 aaPredicted RBP2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 DAZ4Q86SG3 579 aaKnown RBP2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 ZFAND2AQ8N6M9 145 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 TMEM243Q9BU79 118 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 CYSTM1Q9H1C7 97 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 DAZ3Q9NR90 486 aaKnown RBP2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 Q9UF83 564 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 PHLDA3Q9Y5J5 127 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 CSMD2Q7Z408 3487 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 PIEZO1Q92508 2521 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 IGSF10Q6WRI0 2623 aa2.33□□□□□ -2.04
LINCR-0001-203ENST00000524047 ANK3Q12955 4377 aaKnown RBP2.32□□□□□ -2.04
LINCR-0001-203ENST00000524047 CELSR1Q9NYQ6 3014 aa2.32□□□□□ -2.04
LINCR-0001-203ENST00000524047 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
LINCR-0001-203ENST00000524047 IGHV1-58A0A0C4DH39 117 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms