RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 NOP10Q9NPE3 64 aaKnown RBP9.23□□□□□ -0.93
TRAPPC9-208ENST00000520857 MTORP42345 2549 aa9.22□□□□□ -0.93
TRAPPC9-208ENST00000520857 CUBNO60494 3623 aa9.22□□□□□ -0.93
TRAPPC9-208ENST00000520857 TRGV4A0A0C4DH28 118 aa9.22□□□□□ -0.93
TRAPPC9-208ENST00000520857 DEFB121Q5J5C9 76 aa9.22□□□□□ -0.93
TRAPPC9-208ENST00000520857 TMEM89A2RUT3 159 aa9.21□□□□□ -0.93
TRAPPC9-208ENST00000520857 K7EQD1 137 aa9.21□□□□□ -0.93
TRAPPC9-208ENST00000520857 PKD1L2Q7Z442 2459 aa9.21□□□□□ -0.94
TRAPPC9-208ENST00000520857 COX7B2Q8TF08 81 aa9.21□□□□□ -0.94
TRAPPC9-208ENST00000520857 A0A087WVE0 104 aa9.2□□□□□ -0.94
TRAPPC9-208ENST00000520857 ATOX1O00244 68 aa9.2□□□□□ -0.94
TRAPPC9-208ENST00000520857 NCR3O14931 201 aa9.2□□□□□ -0.94
TRAPPC9-208ENST00000520857 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
TRAPPC9-208ENST00000520857 ZANQ9Y493 2812 aa9.2□□□□□ -0.94
TRAPPC9-208ENST00000520857 PIEZO1Q92508 2521 aa9.2□□□□□ -0.94
TRAPPC9-208ENST00000520857 DOPEY1Q5JWR5 2465 aa9.2□□□□□ -0.94
TRAPPC9-208ENST00000520857 IGLV5-39A0A0G2JS06 123 aa9.19□□□□□ -0.94
TRAPPC9-208ENST00000520857 COX7CP15954 63 aa9.19□□□□□ -0.94
TRAPPC9-208ENST00000520857 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
TRAPPC9-208ENST00000520857 A0A087WYN8 130 aa9.19□□□□□ -0.94
TRAPPC9-208ENST00000520857 RPL35AP18077 110 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-208ENST00000520857 SMIM11BQ8TCY0 68 aa9.19□□□□□ -0.94
TRAPPC9-208ENST00000520857 LINC01600Q96MT4 127 aa9.19□□□□□ -0.94
TRAPPC9-208ENST00000520857 J3KT08 172 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 LINC00526Q96FQ7 95 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 OVOL2Q9BRP0 275 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 ITPR1Q14643 2758 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 HIVEP2P31629 2446 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
TRAPPC9-208ENST00000520857 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
TRAPPC9-208ENST00000520857 CLPSL2Q6UWE3 100 aa9.17□□□□□ -0.94
TRAPPC9-208ENST00000520857 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
TRAPPC9-208ENST00000520857 CHD6Q8TD26 2715 aa9.17□□□□□ -0.94
TRAPPC9-208ENST00000520857 NTM-AS1Q6ZSK4 140 aa9.16□□□□□ -0.94
TRAPPC9-208ENST00000520857 CRYBG3Q68DQ2 2970 aa9.16□□□□□ -0.94
TRAPPC9-208ENST00000520857 FLNCQ14315 2725 aa9.16□□□□□ -0.94
TRAPPC9-208ENST00000520857 Q96MF0 132 aa9.15□□□□□ -0.94
TRAPPC9-208ENST00000520857 H0YGX0 51 aa9.15□□□□□ -0.94
TRAPPC9-208ENST00000520857 PF4P02776 101 aa9.15□□□□□ -0.94
TRAPPC9-208ENST00000520857 XCL1P47992 114 aa9.15□□□□□ -0.94
TRAPPC9-208ENST00000520857 RNF152Q8N8N0 203 aa9.15□□□□□ -0.94
TRAPPC9-208ENST00000520857 CCL18P55774 89 aa9.15□□□□□ -0.95
TRAPPC9-208ENST00000520857 TMEM86BQ8N661 226 aa9.15□□□□□ -0.95
TRAPPC9-208ENST00000520857 ZNF702PQ9H963 129 aa9.15□□□□□ -0.95
TRAPPC9-208ENST00000520857 RPL28P46779 137 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 LINC00846Q9NV44 126 aa9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 DEFB130BP0DP73 79 aa9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 DEFB130AP0DP74 79 aa9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 CXCL5P42830 114 aa9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 RPL18AQ02543 176 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
TRAPPC9-208ENST00000520857 TRBV10-1A0A0K0K1A3 114 aa9.13□□□□□ -0.95
TRAPPC9-208ENST00000520857 ORMDL1Q9P0S3 153 aa9.13□□□□□ -0.95
TRAPPC9-208ENST00000520857 BEAN1Q3B7T3 259 aa9.13□□□□□ -0.95
TRAPPC9-208ENST00000520857 WFDC9Q8NEX5 89 aa9.13□□□□□ -0.95
TRAPPC9-208ENST00000520857 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 FAM19A5Q7Z5A7 132 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 A0A096LPF7 62 aa9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 PRORYQ9H606 182 aa9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 ACANP16112 2415 aa9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 USP17L23D6RBM5 183 aa9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 C1orf158Q8N1D5 194 aa9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 LRRC75A-AS1Q8N1F1 130 aa9.12□□□□□ -0.95
TRAPPC9-208ENST00000520857 DSCR8Q96T75 97 aa9.11□□□□□ -0.95
TRAPPC9-208ENST00000520857 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
TRAPPC9-208ENST00000520857 F5H768 121 aa9.11□□□□□ -0.95
TRAPPC9-208ENST00000520857 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
TRAPPC9-208ENST00000520857 ZFHX3Q15911 3703 aa9.11□□□□□ -0.95
TRAPPC9-208ENST00000520857 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-208ENST00000520857 IGLV4-60A0A075B6I1 120 aa9.1□□□□□ -0.95
TRAPPC9-208ENST00000520857 IGKV2-28A0A075B6P5 120 aa9.1□□□□□ -0.95
TRAPPC9-208ENST00000520857 IGKV2D-28P01615 120 aa9.1□□□□□ -0.95
TRAPPC9-208ENST00000520857 SERP2Q8N6R1 65 aa9.09□□□□□ -0.95
TRAPPC9-208ENST00000520857 WFDC10AQ9H1F0 79 aa9.09□□□□□ -0.95
TRAPPC9-208ENST00000520857 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
TRAPPC9-208ENST00000520857 DSCR9P59020 149 aa9.09□□□□□ -0.95
TRAPPC9-208ENST00000520857 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
TRAPPC9-208ENST00000520857 KIR2DL5BQ8NHK3 375 aa9.08□□□□□ -0.96
TRAPPC9-208ENST00000520857 NOTCH2Q04721 2471 aa9.08□□□□□ -0.96
TRAPPC9-208ENST00000520857 GHRHP01286 108 aa9.07□□□□□ -0.96
TRAPPC9-208ENST00000520857 Q6YL49 198 aa9.07□□□□□ -0.96
TRAPPC9-208ENST00000520857 LAMTOR3Q9UHA4 124 aa9.07□□□□□ -0.96
TRAPPC9-208ENST00000520857 ZNF462Q96JM2 2506 aa9.07□□□□□ -0.96
TRAPPC9-208ENST00000520857 CELSR2Q9HCU4 2923 aa9.07□□□□□ -0.96
TRAPPC9-208ENST00000520857 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
TRAPPC9-208ENST00000520857 HILS1P60008 231 aa9.07□□□□□ -0.96
TRAPPC9-208ENST00000520857 IBA57-AS1B1ANH7 110 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 Q6JHZ5 121 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 C4orf3Q8WVX3 66 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 UBL5Q9BZL1 73 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 IGLV10-54A0A075B6I4 117 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 SMIM9A6NGZ8 99 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 J3QLI3 93 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 SS18Q15532 418 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 CRYGAP11844 174 aa9.06□□□□□ -0.96
TRAPPC9-208ENST00000520857 HAMPP81172 84 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms