RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
PCM1-212ENST00000519253 NREPQ16612 68 aa6.12□□□□□ -1.43
PCM1-212ENST00000519253 A0A087WVE0 104 aa6.12□□□□□ -1.43
PCM1-212ENST00000519253 LINC01600Q96MT4 127 aa6.12□□□□□ -1.43
PCM1-212ENST00000519253 A0A087WYN8 130 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 F8WEM9 126 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 Q8N2B8 174 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 APOC4P55056 127 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 LINC00846Q9NV44 126 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 A0A087WZ39 114 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 LINC00959A0A1B0GUT2 108 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 Q8IZM0 81 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 PTPN13Q12923 2485 aa6.11□□□□□ -1.43
PCM1-212ENST00000519253 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
PCM1-212ENST00000519253 FUSP35637 526 aaKnown RBP eCLIP6.1□□□□□ -1.43
PCM1-212ENST00000519253 LINC00337Q8N6G1 96 aa6.1□□□□□ -1.43
PCM1-212ENST00000519253 MUC7Q8TAX7 377 aa6.1□□□□□ -1.43
PCM1-212ENST00000519253 UNC80Q8N2C7 3258 aa6.1□□□□□ -1.43
PCM1-212ENST00000519253 LOC107984640A0A0U1RRK4 108 aa6.1□□□□□ -1.43
PCM1-212ENST00000519253 COX7BP24311 80 aa6.1□□□□□ -1.43
PCM1-212ENST00000519253 COX17Q14061 63 aa6.1□□□□□ -1.43
PCM1-212ENST00000519253 AVPP01185 164 aa6.09□□□□□ -1.43
PCM1-212ENST00000519253 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
PCM1-212ENST00000519253 CHCHD10Q8WYQ3 142 aaPredicted RBP6.09□□□□□ -1.43
PCM1-212ENST00000519253 ODF3L2Q3SX64 289 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 Q8N814 137 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 MRAPQ8TCY5 172 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 CAMK2N2Q96S95 79 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 TRBV10-3A0A0K0K1G6 114 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 CD164L2Q6UWJ8 174 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 SOSTDC1Q6X4U4 206 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 LINC00269Q8N2A0 174 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 USP9YO00507 2555 aaPredicted RBP6.08□□□□□ -1.44
PCM1-212ENST00000519253 USP9XQ93008 2570 aaPredicted RBP6.08□□□□□ -1.44
PCM1-212ENST00000519253 REG3AQ06141 175 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 C11orf72Q8NBR9 251 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 DEFB113Q30KQ7 82 aa6.08□□□□□ -1.44
PCM1-212ENST00000519253 ANKRD11Q6UB99 2663 aaPredicted RBP6.08□□□□□ -1.44
PCM1-212ENST00000519253 HIGD2BQ4VC39 106 aa6.07□□□□□ -1.44
PCM1-212ENST00000519253 C1orf158Q8N1D5 194 aa6.07□□□□□ -1.44
PCM1-212ENST00000519253 SERP1Q9Y6X1 66 aa6.07□□□□□ -1.44
PCM1-212ENST00000519253 NTM-AS1Q6ZSK4 140 aa6.07□□□□□ -1.44
PCM1-212ENST00000519253 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
PCM1-212ENST00000519253 LOC100131303A0A0U1RQF7 123 aa6.07□□□□□ -1.44
PCM1-212ENST00000519253 HRCT1Q6UXD1 115 aa6.06□□□□□ -1.44
PCM1-212ENST00000519253 Q6ZQY7 126 aa6.06□□□□□ -1.44
PCM1-212ENST00000519253 FAM218AQ96MZ4 157 aa6.06□□□□□ -1.44
PCM1-212ENST00000519253 EIF4EBP3O60516 100 aaPredicted RBP6.06□□□□□ -1.44
PCM1-212ENST00000519253 NCOR2Q9Y618 2525 aa6.06□□□□□ -1.44
PCM1-212ENST00000519253 C18orf65Q6ZTR6 163 aa6.06□□□□□ -1.44
PCM1-212ENST00000519253 WFDC9Q8NEX5 89 aa6.05□□□□□ -1.44
PCM1-212ENST00000519253 SPART-AS1P0CW21 52 aa6.05□□□□□ -1.44
PCM1-212ENST00000519253 BPY2O14599 106 aa6.05□□□□□ -1.44
PCM1-212ENST00000519253 IGHV4-31P0DP07 118 aa6.05□□□□□ -1.44
PCM1-212ENST00000519253 LYRM9A8MSI8 78 aa6.05□□□□□ -1.44
PCM1-212ENST00000519253 IGLV4-60A0A075B6I1 120 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 DPH3Q96FX2 82 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 KLK12Q9UKR0 248 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 BCE1O60756 84 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 HIVEP3Q5T1R4 2406 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 IGHV3OR16-9A0A0B4J2B5 98 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 LINC01561Q8N1V8 128 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 Q9UF83 564 aa6.04□□□□□ -1.44
PCM1-212ENST00000519253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.03□□□□□ -1.44
PCM1-212ENST00000519253 SNURFQ9Y675 71 aa6.03□□□□□ -1.44
PCM1-212ENST00000519253 DNAJC9-AS1A6NH13 148 aa6.03□□□□□ -1.44
PCM1-212ENST00000519253 FAM19A1Q7Z5A9 133 aa6.03□□□□□ -1.44
PCM1-212ENST00000519253 DEFB105AQ8NG35 78 aa6.03□□□□□ -1.44
PCM1-212ENST00000519253 ESM1Q9NQ30 184 aa6.02□□□□□ -1.44
PCM1-212ENST00000519253 CCDC168Q8NDH2 2452 aa6.02□□□□□ -1.45
PCM1-212ENST00000519253 FAM19A3Q7Z5A8 133 aa6.02□□□□□ -1.45
PCM1-212ENST00000519253 SCXQ7RTU7 201 aa6.02□□□□□ -1.45
PCM1-212ENST00000519253 ETDCA0A1B0GVM5 59 aa6.02□□□□□ -1.45
PCM1-212ENST00000519253 TRIOO75962 3097 aa6.02□□□□□ -1.45
PCM1-212ENST00000519253 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
PCM1-212ENST00000519253 C9orf66Q5T8R8 295 aa6.01□□□□□ -1.45
PCM1-212ENST00000519253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.01□□□□□ -1.45
PCM1-212ENST00000519253 MIFP14174 115 aa6.01□□□□□ -1.45
PCM1-212ENST00000519253 COL27A1Q8IZC6 1860 aaPredicted RBP6.01□□□□□ -1.45
PCM1-212ENST00000519253 MP68P56378 58 aa6□□□□□ -1.45
PCM1-212ENST00000519253 FHL2Q14192 279 aa6□□□□□ -1.45
PCM1-212ENST00000519253 BBC3Q96PG8 261 aaPredicted RBP6□□□□□ -1.45
PCM1-212ENST00000519253 A8MTW9 85 aa6□□□□□ -1.45
PCM1-212ENST00000519253 HILS1P60008 231 aa6□□□□□ -1.45
PCM1-212ENST00000519253 DEFB135Q30KP9 77 aa6□□□□□ -1.45
PCM1-212ENST00000519253 KIR2DL5BQ8NHK3 375 aa6□□□□□ -1.45
PCM1-212ENST00000519253 IGKV2D-24A0A075B6R9 120 aa6□□□□□ -1.45
PCM1-212ENST00000519253 ZNF73O43830 326 aaPredicted RBP6□□□□□ -1.45
PCM1-212ENST00000519253 LINC00575Q6W349 94 aa6□□□□□ -1.45
PCM1-212ENST00000519253 MUC4Q99102 2169 aa6□□□□□ -1.45
PCM1-212ENST00000519253 XAGE1AQ9HD64 81 aa5.99□□□□□ -1.45
PCM1-212ENST00000519253 IGKV2-28A0A075B6P5 120 aa5.99□□□□□ -1.45
PCM1-212ENST00000519253 IGHV4-28A0A0C4DH34 117 aa5.99□□□□□ -1.45
PCM1-212ENST00000519253 IGKV2D-28P01615 120 aa5.99□□□□□ -1.45
PCM1-212ENST00000519253 Q8N3U1 123 aa5.99□□□□□ -1.45
PCM1-212ENST00000519253 SONP18583 2426 aaKnown RBP5.99□□□□□ -1.45
PCM1-212ENST00000519253 PRR3P79522 188 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms