RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 C10orf142B7Z368 130 aa9.78□□□□□ -0.84
TCOF1-214ENST00000515035 LY6LH3BQJ8 138 aa9.78□□□□□ -0.84
TCOF1-214ENST00000515035 CRYGDP07320 174 aa9.78□□□□□ -0.84
TCOF1-214ENST00000515035 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
TCOF1-214ENST00000515035 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
TCOF1-214ENST00000515035 PMAIP1Q13794 54 aa9.78□□□□□ -0.84
TCOF1-214ENST00000515035 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
TCOF1-214ENST00000515035 IGIPA6NJ69 53 aa9.77□□□□□ -0.84
TCOF1-214ENST00000515035 FAM30AQ9NZY2 134 aa9.77□□□□□ -0.84
TCOF1-214ENST00000515035 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 CELA1Q9UNI1 258 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 UBE2D3P61077 147 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 UBE2D2P62837 147 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 C11orf45Q8TAV5 145 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 IGF2RP11717 2491 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 INAFM1C9JVW0 142 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 C11orf71Q6IPW1 123 aa9.77□□□□□ -0.85
TCOF1-214ENST00000515035 KLLNB2CW77 178 aa9.76□□□□□ -0.85
TCOF1-214ENST00000515035 KLK5Q9Y337 293 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-214ENST00000515035 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
TCOF1-214ENST00000515035 M0R378 163 aa9.76□□□□□ -0.85
TCOF1-214ENST00000515035 KIR2DL5BQ8NHK3 375 aa9.75□□□□□ -0.85
TCOF1-214ENST00000515035 DHRS4-AS1Q9P1J3 65 aa9.75□□□□□ -0.85
TCOF1-214ENST00000515035 LINC00959A0A1B0GUT2 108 aa9.75□□□□□ -0.85
TCOF1-214ENST00000515035 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-214ENST00000515035 ZNF73O43830 326 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-214ENST00000515035 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
TCOF1-214ENST00000515035 BBC3Q96PG8 261 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-214ENST00000515035 Q6ZSV7 163 aa9.72□□□□□ -0.85
TCOF1-214ENST00000515035 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
TCOF1-214ENST00000515035 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
TCOF1-214ENST00000515035 C10orf99Q6UWK7 81 aa9.71□□□□□ -0.85
TCOF1-214ENST00000515035 LOC100131303A0A0U1RQF7 123 aa9.71□□□□□ -0.85
TCOF1-214ENST00000515035 SPINK6Q6UWN8 80 aa9.71□□□□□ -0.85
TCOF1-214ENST00000515035 DEFB131BA0A096LNP1 70 aa9.71□□□□□ -0.86
TCOF1-214ENST00000515035 TSPEAR-AS2P59090 65 aa9.71□□□□□ -0.86
TCOF1-214ENST00000515035 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
TCOF1-214ENST00000515035 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.86
TCOF1-214ENST00000515035 DSCAMO60469 2012 aa9.71□□□□□ -0.86
TCOF1-214ENST00000515035 COX17Q14061 63 aa9.71□□□□□ -0.86
TCOF1-214ENST00000515035 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.86
TCOF1-214ENST00000515035 MUC22E2RYF6 1773 aaPredicted RBP9.71□□□□□ -0.86
TCOF1-214ENST00000515035 RPL28P46779 137 aaKnown RBP9.7□□□□□ -0.86
TCOF1-214ENST00000515035 NUP210LQ5VU65 1888 aa9.7□□□□□ -0.86
TCOF1-214ENST00000515035 LY6G6DO95868 133 aa9.7□□□□□ -0.86
TCOF1-214ENST00000515035 SRCAPQ6ZRS2 3230 aa9.7□□□□□ -0.86
TCOF1-214ENST00000515035 PRM2P04554 102 aa9.7□□□□□ -0.86
TCOF1-214ENST00000515035 Q8IZM0 81 aa9.7□□□□□ -0.86
TCOF1-214ENST00000515035 LOC107984640A0A0U1RRK4 108 aa9.69□□□□□ -0.86
TCOF1-214ENST00000515035 CEP192Q8TEP8 1941 aa9.69□□□□□ -0.86
TCOF1-214ENST00000515035 LINC00208Q96KT6 92 aa9.69□□□□□ -0.86
TCOF1-214ENST00000515035 ZNF462Q96JM2 2506 aa9.69□□□□□ -0.86
TCOF1-214ENST00000515035 PRYO14603 147 aa9.69□□□□□ -0.86
TCOF1-214ENST00000515035 Q8N3U1 123 aa9.69□□□□□ -0.86
TCOF1-214ENST00000515035 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-214ENST00000515035 NANOS2P60321 138 aaKnown RBP9.68□□□□□ -0.86
TCOF1-214ENST00000515035 Q8N814 137 aa9.68□□□□□ -0.86
TCOF1-214ENST00000515035 A0A096LNJ9 63 aa9.68□□□□□ -0.86
TCOF1-214ENST00000515035 Q8N6K4 173 aa9.68□□□□□ -0.86
TCOF1-214ENST00000515035 CSDC2Q9Y534 153 aaKnown RBP9.68□□□□□ -0.86
TCOF1-214ENST00000515035 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
TCOF1-214ENST00000515035 LINC00482Q8N8I6 264 aa9.68□□□□□ -0.86
TCOF1-214ENST00000515035 WFDC10AQ9H1F0 79 aa9.68□□□□□ -0.86
TCOF1-214ENST00000515035 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
TCOF1-214ENST00000515035 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-214ENST00000515035 A0A087WYN8 130 aa9.67□□□□□ -0.86
TCOF1-214ENST00000515035 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
TCOF1-214ENST00000515035 RPL37AP8A6NKH3 93 aa9.66□□□□□ -0.86
TCOF1-214ENST00000515035 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
TCOF1-214ENST00000515035 PSPHP1O15172 72 aa9.66□□□□□ -0.86
TCOF1-214ENST00000515035 CYSRT1A8MQ03 144 aa9.65□□□□□ -0.86
TCOF1-214ENST00000515035 PIEZO2Q9H5I5 2752 aa9.65□□□□□ -0.87
TCOF1-214ENST00000515035 CDIP1Q9H305 208 aa9.65□□□□□ -0.87
TCOF1-214ENST00000515035 RETNQ9HD89 108 aa9.64□□□□□ -0.87
TCOF1-214ENST00000515035 LELP1Q5T871 98 aa9.64□□□□□ -0.87
TCOF1-214ENST00000515035 MRGPRG-AS1Q2M3A8 158 aa9.64□□□□□ -0.87
TCOF1-214ENST00000515035 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
TCOF1-214ENST00000515035 ATG2AQ2TAZ0 1938 aa9.63□□□□□ -0.87
TCOF1-214ENST00000515035 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
TCOF1-214ENST00000515035 ZNF580Q9UK33 172 aa9.63□□□□□ -0.87
TCOF1-214ENST00000515035 HILS1P60008 231 aa9.62□□□□□ -0.87
TCOF1-214ENST00000515035 UNQ6190/PRO20217Q6UXQ8 127 aa9.62□□□□□ -0.87
TCOF1-214ENST00000515035 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
TCOF1-214ENST00000515035 EML5Q05BV3 1969 aa9.61□□□□□ -0.87
TCOF1-214ENST00000515035 TRBV10-3A0A0K0K1G6 114 aa9.61□□□□□ -0.87
TCOF1-214ENST00000515035 TMEM254Q8TBM7 123 aa9.61□□□□□ -0.87
TCOF1-214ENST00000515035 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
TCOF1-214ENST00000515035 LINC00846Q9NV44 126 aa9.61□□□□□ -0.87
TCOF1-214ENST00000515035 COX6A2Q02221 97 aa9.6□□□□□ -0.87
TCOF1-214ENST00000515035 TLN1Q9Y490 2541 aaKnown RBP9.6□□□□□ -0.87
TCOF1-214ENST00000515035 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-214ENST00000515035 KPRPQ5T749 579 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-214ENST00000515035 CHCHD7Q9BUK0 85 aa9.6□□□□□ -0.87
TCOF1-214ENST00000515035 ZNF702PQ9H963 129 aa9.59□□□□□ -0.87
TCOF1-214ENST00000515035 LINC01006Q8NI28 216 aa9.59□□□□□ -0.87
TCOF1-214ENST00000515035 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-214ENST00000515035 LINC01547P58512 204 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-214ENST00000515035 AMELXQ99217 191 aa9.59□□□□□ -0.87
TCOF1-214ENST00000515035 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.88
TCOF1-214ENST00000515035 TRBV7-6A0A0J9YX20 115 aa9.59□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms