RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 EIF5AL1Q6IS14 154 aaKnown RBP3.48□□□□□ -1.85
GYPB-215ENST00000513677 SMIM15Q7Z3B0 74 aa3.48□□□□□ -1.85
GYPB-215ENST00000513677 FAM19A5Q7Z5A7 132 aaPredicted RBP3.48□□□□□ -1.85
GYPB-215ENST00000513677 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
GYPB-215ENST00000513677 NUP35Q8NFH5 326 aa3.48□□□□□ -1.85
GYPB-215ENST00000513677 MBD3L1Q8WWY6 194 aa3.48□□□□□ -1.85
GYPB-215ENST00000513677 MRAP2Q96G30 205 aa3.48□□□□□ -1.85
GYPB-215ENST00000513677 TRAV13-1A0A0B4J241 112 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 TRAV1-1A0A0B4J248 108 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.47□□□□□ -1.85
GYPB-215ENST00000513677 H7C423 109 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 I3L3M4 83 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 BCL2L11O43521 198 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 UBE2BP63146 152 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 MEF2BQ02080 365 aaPredicted RBP3.47□□□□□ -1.85
GYPB-215ENST00000513677 SPAG11BQ08648 103 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 CD164L2Q6UWJ8 174 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 KRTAP11-1Q8IUC1 163 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 RNASE7Q9H1E1 156 aaKnown RBP3.47□□□□□ -1.85
GYPB-215ENST00000513677 MED9Q9NWA0 146 aa3.47□□□□□ -1.85
GYPB-215ENST00000513677 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 UMAD1C9J7I0 102 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 TSHBP01222 138 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 CTRLP40313 264 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 GAGE2EQ4V326 116 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 C9orf62Q8N4C0 152 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 C11orf52Q96A22 123 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 RPP21Q9H633 154 aaKnown RBP3.46□□□□□ -1.86
GYPB-215ENST00000513677 ST20Q9HBF5 79 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 MANBALQ9NQG1 85 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 CDC42SE2Q9NRR3 84 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 GAGE2DQ9UEU5 116 aa3.46□□□□□ -1.86
GYPB-215ENST00000513677 TRBV20OR9-2A0A075B6H5 130 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 C7orf77A4D0Y5 90 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 C1orf196B1AJZ1 125 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 G3V3Q6 166 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 FCER1GP30273 86 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 SNRPEP62304 92 aaKnown RBP3.45□□□□□ -1.86
GYPB-215ENST00000513677 GAGE2AQ6NT46 116 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 ORAOV1Q8WV07 137 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 LITAFQ99732 161 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 BIN3Q9NQY0 253 aa3.45□□□□□ -1.86
GYPB-215ENST00000513677 KANTRA0A1W2PQU2 76 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 M0QXV9 152 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 ESDP10768 282 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 RPL13AP40429 203 aaKnown RBP3.44□□□□□ -1.86
GYPB-215ENST00000513677 TEX261Q6UWH6 196 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 Q6ZUT4 128 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 TSKUQ8WUA8 353 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 BORCS7Q96B45 105 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 C2orf48Q96LS8 159 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 FAM210AQ96ND0 272 aa3.44□□□□□ -1.86
GYPB-215ENST00000513677 TEX46H3BTG2 121 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 K7EN84 100 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 GATCO43716 136 aaKnown RBP3.43□□□□□ -1.86
GYPB-215ENST00000513677 PDE6DO43924 150 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 CEBPGP53567 150 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 UNQ6190/PRO20217Q6UXQ8 127 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 MRPL52Q86TS9 123 aaKnown RBP3.43□□□□□ -1.86
GYPB-215ENST00000513677 SMIM12Q96EX1 92 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 IMMP2LQ96T52 175 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 RETNLBQ9BQ08 111 aa3.43□□□□□ -1.86
GYPB-215ENST00000513677 TRBV6-5A0A0K0K1A5 114 aa3.42□□□□□ -1.86
GYPB-215ENST00000513677 NDUFA1O15239 70 aa3.42□□□□□ -1.86
GYPB-215ENST00000513677 AMN1Q8IY45 258 aa3.42□□□□□ -1.86
GYPB-215ENST00000513677 OCC1Q8TAD7 63 aa3.42□□□□□ -1.86
GYPB-215ENST00000513677 CNFNQ9BYD5 112 aa3.42□□□□□ -1.86
GYPB-215ENST00000513677 UBE2D4Q9Y2X8 147 aa3.42□□□□□ -1.86
GYPB-215ENST00000513677 A8MWL6 223 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 SMAGPQ0VAQ4 97 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 KIAA1644Q3SXP7 199 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 LINC00469Q8N7U9 141 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 OR10D4PQ8NGN7 298 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 TYMSOSQ8TAI1 123 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 BATF3Q9NR55 127 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 MRPL35Q9NZE8 188 aaKnown RBP3.41□□□□□ -1.86
GYPB-215ENST00000513677 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
GYPB-215ENST00000513677 TRBV27A0A0K0K1C4 114 aa3.4□□□□□ -1.87
GYPB-215ENST00000513677 RAB4AP20338 218 aa3.4□□□□□ -1.87
GYPB-215ENST00000513677 POLR2KP53803 58 aaKnown RBP3.4□□□□□ -1.87
GYPB-215ENST00000513677 RPL39P62891 51 aaKnown RBP3.4□□□□□ -1.87
GYPB-215ENST00000513677 ZNF345Q14585 488 aa3.4□□□□□ -1.87
GYPB-215ENST00000513677 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
GYPB-215ENST00000513677 KIR2DL4Q99706 377 aa3.4□□□□□ -1.87
GYPB-215ENST00000513677 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
GYPB-215ENST00000513677 ANAPC11Q9NYG5 84 aa3.4□□□□□ -1.87
GYPB-215ENST00000513677 CARHSP1Q9Y2V2 147 aaKnown RBP3.4□□□□□ -1.87
GYPB-215ENST00000513677 A0A087X002 238 aa3.39□□□□□ -1.87
GYPB-215ENST00000513677 A0A1B0GUT8 65 aa3.39□□□□□ -1.87
GYPB-215ENST00000513677 ZNF861PO60384 105 aa3.39□□□□□ -1.87
GYPB-215ENST00000513677 VPREB1P12018 145 aa3.39□□□□□ -1.87
GYPB-215ENST00000513677 PNRC1Q12796 327 aaPredicted RBP3.39□□□□□ -1.87
GYPB-215ENST00000513677 TMEM241Q24JQ0 296 aa3.39□□□□□ -1.87
GYPB-215ENST00000513677 C9orf129Q5T035 196 aaKnown RBP3.39□□□□□ -1.87
GYPB-215ENST00000513677 C2orf82Q6UX34 121 aa3.39□□□□□ -1.87
GYPB-215ENST00000513677 NOTCH2NLQ7Z3S9 236 aa3.39□□□□□ -1.87
GYPB-215ENST00000513677 PACRGQ96M98 296 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms