RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 LAMTOR2Q9Y2Q5 125 aa8.39□□□□□ -1.07
RNF4-215ENST00000511843 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
RNF4-215ENST00000511843 IFI27P40305 119 aaPredicted RBP8.38□□□□□ -1.07
RNF4-215ENST00000511843 Q8N8P6 123 aa8.38□□□□□ -1.07
RNF4-215ENST00000511843 SEC11CQ9BY50 192 aa8.38□□□□□ -1.07
RNF4-215ENST00000511843 LRP1Q07954 4544 aaKnown RBP8.38□□□□□ -1.07
RNF4-215ENST00000511843 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
RNF4-215ENST00000511843 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
RNF4-215ENST00000511843 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
RNF4-215ENST00000511843 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
RNF4-215ENST00000511843 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
RNF4-215ENST00000511843 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
RNF4-215ENST00000511843 C2orf66Q6UXQ4 117 aa8.36□□□□□ -1.07
RNF4-215ENST00000511843 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
RNF4-215ENST00000511843 APOMO95445 188 aa8.35□□□□□ -1.07
RNF4-215ENST00000511843 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
RNF4-215ENST00000511843 TMEM141Q96I45 108 aa8.35□□□□□ -1.07
RNF4-215ENST00000511843 CYSLTR1Q9Y271 337 aa8.35□□□□□ -1.07
RNF4-215ENST00000511843 PYGO1Q9Y3Y4 419 aa8.35□□□□□ -1.07
RNF4-215ENST00000511843 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
RNF4-215ENST00000511843 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
RNF4-215ENST00000511843 LINC00173Q6ZV60 143 aa8.34□□□□□ -1.07
RNF4-215ENST00000511843 TRAV9-1A0A075B6T8 112 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 TGIF2-C20orf24A0A0A6YYL0 155 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.33□□□□□ -1.08
RNF4-215ENST00000511843 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 ORMDL2Q53FV1 153 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 C10orf91Q5T1B1 145 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 C7orf33Q8WU49 177 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
RNF4-215ENST00000511843 NXT2Q9NPJ8 142 aaKnown RBP8.33□□□□□ -1.08
RNF4-215ENST00000511843 IGIPA6NJ69 53 aa8.32□□□□□ -1.08
RNF4-215ENST00000511843 S100PP25815 95 aa8.32□□□□□ -1.08
RNF4-215ENST00000511843 UBE2D1P51668 147 aa8.32□□□□□ -1.08
RNF4-215ENST00000511843 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
RNF4-215ENST00000511843 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
RNF4-215ENST00000511843 RPS10P5Q9NQ39 176 aa8.32□□□□□ -1.08
RNF4-215ENST00000511843 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
RNF4-215ENST00000511843 LINC00474Q9P2X8 69 aa8.31□□□□□ -1.08
RNF4-215ENST00000511843 PKIGQ9Y2B9 76 aa8.31□□□□□ -1.08
RNF4-215ENST00000511843 CARHSP1Q9Y2V2 147 aaKnown RBP8.31□□□□□ -1.08
RNF4-215ENST00000511843 A0A087WZ39 114 aa8.3□□□□□ -1.08
RNF4-215ENST00000511843 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
RNF4-215ENST00000511843 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
RNF4-215ENST00000511843 Q6ZN92 141 aa8.3□□□□□ -1.08
RNF4-215ENST00000511843 AMELXQ99217 191 aa8.3□□□□□ -1.08
RNF4-215ENST00000511843 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
RNF4-215ENST00000511843 ALKBH7Q9BT30 221 aaPredicted RBP8.3□□□□□ -1.08
RNF4-215ENST00000511843 VCX2Q9H322 139 aa8.3□□□□□ -1.08
RNF4-215ENST00000511843 K7EMI3 77 aa8.29□□□□□ -1.08
RNF4-215ENST00000511843 NDUFA1O15239 70 aa8.29□□□□□ -1.08
RNF4-215ENST00000511843 OXTP01178 125 aa8.29□□□□□ -1.08
RNF4-215ENST00000511843 RHEBQ15382 184 aa8.29□□□□□ -1.08
RNF4-215ENST00000511843 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
RNF4-215ENST00000511843 GNB1LQ9BYB4 327 aa8.29□□□□□ -1.08
RNF4-215ENST00000511843 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
RNF4-215ENST00000511843 KIAA0087Q14695 138 aa8.28□□□□□ -1.08
RNF4-215ENST00000511843 C9orf116Q5BN46 136 aaPredicted RBP8.28□□□□□ -1.08
RNF4-215ENST00000511843 TOMM6Q96B49 74 aa8.28□□□□□ -1.08
RNF4-215ENST00000511843 MRPL35Q9NZE8 188 aaKnown RBP8.28□□□□□ -1.08
RNF4-215ENST00000511843 C6orf48Q9UBA6 75 aa8.28□□□□□ -1.08
RNF4-215ENST00000511843 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
RNF4-215ENST00000511843 RNF151Q2KHN1 245 aa8.27□□□□□ -1.09
RNF4-215ENST00000511843 FAM168BA1KXE4 195 aa8.26□□□□□ -1.09
RNF4-215ENST00000511843 APOC3P02656 99 aa8.26□□□□□ -1.09
RNF4-215ENST00000511843 Q6ZRP5 223 aa8.26□□□□□ -1.09
RNF4-215ENST00000511843 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
RNF4-215ENST00000511843 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
RNF4-215ENST00000511843 TIMM17AQ99595 171 aa8.25□□□□□ -1.09
RNF4-215ENST00000511843 TOMM7Q9P0U1 55 aa8.25□□□□□ -1.09
RNF4-215ENST00000511843 CDKN2A-AS1Q9UH64 79 aa8.25□□□□□ -1.09
RNF4-215ENST00000511843 LINC01546A6NGU7 62 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 F8WDY8 70 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 MT-ND6P03923 174 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 NPSP0C0P6 89 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 MT1HL1P0DM35 61 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 COX19Q49B96 90 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 ERASQ7Z444 233 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
RNF4-215ENST00000511843 G0S2P27469 103 aa8.23□□□□□ -1.09
RNF4-215ENST00000511843 PAPPA-AS1Q5QFB9 102 aa8.23□□□□□ -1.09
RNF4-215ENST00000511843 FAM19A5Q7Z5A7 132 aaPredicted RBP8.23□□□□□ -1.09
RNF4-215ENST00000511843 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
RNF4-215ENST00000511843 PRSS2P07478 247 aa8.22□□□□□ -1.09
RNF4-215ENST00000511843 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
RNF4-215ENST00000511843 GEMIN7Q9H840 131 aaKnown RBP8.22□□□□□ -1.09
RNF4-215ENST00000511843 SMCO4Q9NRQ5 59 aa8.22□□□□□ -1.09
RNF4-215ENST00000511843 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
RNF4-215ENST00000511843 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.1
RNF4-215ENST00000511843 HERVK_113P63121 156 aa8.21□□□□□ -1.1
RNF4-215ENST00000511843 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
RNF4-215ENST00000511843 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
RNF4-215ENST00000511843 LINC00469Q8N7U9 141 aa8.21□□□□□ -1.1
RNF4-215ENST00000511843 URB1-AS1Q96HZ7 61 aa8.21□□□□□ -1.1
RNF4-215ENST00000511843 A0A096LNJ9 63 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms