RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 VCYO14598 125 aa11.03□□□□□ -0.64
HMGCS1-206ENST00000511774 TIMM21Q9BVV7 248 aa11.03□□□□□ -0.64
HMGCS1-206ENST00000511774 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
HMGCS1-206ENST00000511774 GATCO43716 136 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-206ENST00000511774 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-206ENST00000511774 C2orf82Q6UX34 121 aa11.02□□□□□ -0.65
HMGCS1-206ENST00000511774 CTDSP1Q9GZU7 261 aa11.02□□□□□ -0.65
HMGCS1-206ENST00000511774 KANTRA0A1W2PQU2 76 aa11.01□□□□□ -0.65
HMGCS1-206ENST00000511774 CRYGAP11844 174 aa11.01□□□□□ -0.65
HMGCS1-206ENST00000511774 HMSDA8MTL9 139 aa10.99□□□□□ -0.65
HMGCS1-206ENST00000511774 A8MWL6 223 aa10.99□□□□□ -0.65
HMGCS1-206ENST00000511774 NDUFC2-KCTD14E9PQ53 114 aa10.99□□□□□ -0.65
HMGCS1-206ENST00000511774 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-206ENST00000511774 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
HMGCS1-206ENST00000511774 KRTAP4-1Q9BYQ7 146 aa10.98□□□□□ -0.65
HMGCS1-206ENST00000511774 C22orf24Q9Y442 160 aa10.98□□□□□ -0.65
HMGCS1-206ENST00000511774 A0A1B0GUT8 65 aa10.97□□□□□ -0.65
HMGCS1-206ENST00000511774 NUPR1O60356 82 aa10.97□□□□□ -0.65
HMGCS1-206ENST00000511774 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
HMGCS1-206ENST00000511774 FAM231DQ6ZW35 169 aa10.97□□□□□ -0.65
HMGCS1-206ENST00000511774 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
HMGCS1-206ENST00000511774 LINC00469Q8N7U9 141 aa10.96□□□□□ -0.65
HMGCS1-206ENST00000511774 KIR2DL4Q99706 377 aa10.96□□□□□ -0.65
HMGCS1-206ENST00000511774 HIGD1CA8MV81 97 aa10.95□□□□□ -0.66
HMGCS1-206ENST00000511774 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
HMGCS1-206ENST00000511774 CT83Q5H943 113 aa10.94□□□□□ -0.66
HMGCS1-206ENST00000511774 LINC00173Q6ZV60 143 aa10.94□□□□□ -0.66
HMGCS1-206ENST00000511774 IFITM10A6NMD0 228 aa10.93□□□□□ -0.66
HMGCS1-206ENST00000511774 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
HMGCS1-206ENST00000511774 LINC00304Q8N9R0 145 aa10.93□□□□□ -0.66
HMGCS1-206ENST00000511774 BCE1O60756 84 aa10.92□□□□□ -0.66
HMGCS1-206ENST00000511774 RPL28P46779 137 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-206ENST00000511774 MRPS36P82909 103 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-206ENST00000511774 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
HMGCS1-206ENST00000511774 BORCS7Q96B45 105 aa10.92□□□□□ -0.66
HMGCS1-206ENST00000511774 XAGE1AQ9HD64 81 aa10.92□□□□□ -0.66
HMGCS1-206ENST00000511774 HBBP68871 147 aa10.91□□□□□ -0.66
HMGCS1-206ENST00000511774 LINC01547P58512 204 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-206ENST00000511774 MRPL51Q4U2R6 128 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-206ENST00000511774 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
HMGCS1-206ENST00000511774 SPANXA1Q9NS26 97 aa10.9□□□□□ -0.66
HMGCS1-206ENST00000511774 TGIF2-C20orf24A0A0A6YYL0 155 aa10.89□□□□□ -0.67
HMGCS1-206ENST00000511774 KRTAP13-1Q8IUC0 172 aa10.89□□□□□ -0.67
HMGCS1-206ENST00000511774 PACRGQ96M98 296 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-206ENST00000511774 ZNF727A8MUV8 499 aa10.88□□□□□ -0.67
HMGCS1-206ENST00000511774 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
HMGCS1-206ENST00000511774 PPP1R17O96001 155 aa10.87□□□□□ -0.67
HMGCS1-206ENST00000511774 LBHQ53QV2 105 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-206ENST00000511774 MRPL55Q7Z7F7 128 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-206ENST00000511774 RPL32P62910 135 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-206ENST00000511774 SRSF3P84103 164 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-206ENST00000511774 FAM104BQ5XKR9 115 aa10.86□□□□□ -0.67
HMGCS1-206ENST00000511774 TRBV24-1A0A075B6N3 115 aa10.85□□□□□ -0.67
HMGCS1-206ENST00000511774 RPL37AP8A6NKH3 93 aa10.85□□□□□ -0.67
HMGCS1-206ENST00000511774 TCAPO15273 167 aa10.85□□□□□ -0.67
HMGCS1-206ENST00000511774 TAGLN2P37802 199 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-206ENST00000511774 C20orf78Q9BR46 151 aa10.85□□□□□ -0.67
HMGCS1-206ENST00000511774 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
HMGCS1-206ENST00000511774 RIGQ13278 110 aa10.84□□□□□ -0.67
HMGCS1-206ENST00000511774 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
HMGCS1-206ENST00000511774 LINC00167Q96N53 147 aa10.84□□□□□ -0.67
HMGCS1-206ENST00000511774 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
HMGCS1-206ENST00000511774 IGLV4-3A0A075B6K6 122 aa10.83□□□□□ -0.68
HMGCS1-206ENST00000511774 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
HMGCS1-206ENST00000511774 ASB16-AS1Q495Z4 193 aa10.83□□□□□ -0.68
HMGCS1-206ENST00000511774 LINC01551Q86U37 167 aa10.83□□□□□ -0.68
HMGCS1-206ENST00000511774 V9GYV3 84 aa10.83□□□□□ -0.68
HMGCS1-206ENST00000511774 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
HMGCS1-206ENST00000511774 CEBPGP53567 150 aa10.82□□□□□ -0.68
HMGCS1-206ENST00000511774 ZC2HC1BQ5TFG8 222 aa10.82□□□□□ -0.68
HMGCS1-206ENST00000511774 LCE2CQ5TA81 110 aa10.81□□□□□ -0.68
HMGCS1-206ENST00000511774 OSTCQ9NRP0 149 aa10.81□□□□□ -0.68
HMGCS1-206ENST00000511774 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
HMGCS1-206ENST00000511774 TOMM7Q9P0U1 55 aa10.8□□□□□ -0.68
HMGCS1-206ENST00000511774 NPYP01303 97 aa10.79□□□□□ -0.68
HMGCS1-206ENST00000511774 KRTAP13-3Q3SY46 172 aa10.79□□□□□ -0.68
HMGCS1-206ENST00000511774 LINC01561Q8N1V8 128 aa10.79□□□□□ -0.68
HMGCS1-206ENST00000511774 C3orf22Q8N5N4 141 aa10.79□□□□□ -0.68
HMGCS1-206ENST00000511774 LINC00862A6NCI5 91 aa10.78□□□□□ -0.68
HMGCS1-206ENST00000511774 CKS2P33552 79 aa10.78□□□□□ -0.68
HMGCS1-206ENST00000511774 RGS21Q2M5E4 152 aa10.78□□□□□ -0.68
HMGCS1-206ENST00000511774 IGKV2D-26A0A0A0MRZ7 120 aa10.77□□□□□ -0.69
HMGCS1-206ENST00000511774 SMIM7Q9BQ49 75 aa10.77□□□□□ -0.69
HMGCS1-206ENST00000511774 BATF3Q9NR55 127 aa10.77□□□□□ -0.69
HMGCS1-206ENST00000511774 PYGO1Q9Y3Y4 419 aa10.77□□□□□ -0.69
HMGCS1-206ENST00000511774 D6R8Y8 96 aa10.76□□□□□ -0.69
HMGCS1-206ENST00000511774 CKS1BP61024 79 aa10.76□□□□□ -0.69
HMGCS1-206ENST00000511774 PRSS2P07478 247 aa10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 IFI27P40305 119 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 UBE2AP49459 152 aa10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 CTAG1AP78358 180 aa10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 C6orf226Q5I0X4 101 aa10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 Q8IZM0 81 aa10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 TMEM141Q96I45 108 aa10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 EIF5A2Q9GZV4 153 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-206ENST00000511774 Q6ZN92 141 aa10.74□□□□□ -0.69
HMGCS1-206ENST00000511774 SCO1O75880 301 aa10.73□□□□□ -0.69
HMGCS1-206ENST00000511774 PNRC1Q12796 327 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-206ENST00000511774 ALKBH7Q9BT30 221 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-206ENST00000511774 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms