RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C22orf24Q9Y442 160 aa2.95□□□□□ -1.94
NIPBL-206ENST00000509429 MYO7BQ6PIF6 2116 aa2.95□□□□□ -1.94
NIPBL-206ENST00000509429 CACNA1CQ13936 2221 aa2.95□□□□□ -1.94
NIPBL-206ENST00000509429 IGHV3OR16-8A0A075B7F1 116 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 TRAV12-3A0A0B4J271 114 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 IGHV1-3A0A0C4DH29 117 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 RTL8CO15255 209 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 DEFA4P12838 97 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 LINC01006Q8NI28 216 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 GFRA4Q9GZZ7 299 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 C14orf132Q9NPU4 83 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 PDE4DIPQ5VU43 2346 aa2.94□□□□□ -1.94
NIPBL-206ENST00000509429 IGKV3D-15A0A087WSY6 115 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 C17orf98A8MV24 154 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 PRAC2D3DTV9 90 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 DNAH10OSP0CZ25 163 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 ELOF1P60002 83 aaKnown RBP2.93□□□□□ -1.94
NIPBL-206ENST00000509429 Q6ZS52 159 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 OBSCN-AS1Q96MR7 158 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 NDUFA4L2Q9NRX3 87 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 LINC00846Q9NV44 126 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 FAM215AQ9Y5M1 114 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 TRANK1O15050 2925 aa2.93□□□□□ -1.94
NIPBL-206ENST00000509429 TRAV12-1A0A0B4J245 112 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 A0A0J9YY99 117 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 H7C2G1 150 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 P0C880 135 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 IAPPP10997 89 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 SPANXN5Q5MJ07 72 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 C15orf56Q8N910 161 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 UBALD1Q8TB05 177 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 ICOSQ9Y6W8 199 aa2.92□□□□□ -1.94
NIPBL-206ENST00000509429 H3BPC8 53 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 MRPL33O75394 65 aaKnown RBP2.91□□□□□ -1.94
NIPBL-206ENST00000509429 DNAL4O96015 105 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 P0C879 139 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 TLX1NBP0CAT3 122 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 COX6B1P14854 86 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 NTM-AS1Q6ZSK4 140 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 C20orf166-AS1Q96NR2 134 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 PRR15LQ9BU68 103 aa2.91□□□□□ -1.94
NIPBL-206ENST00000509429 CHD9Q3L8U1 2897 aa2.9□□□□□ -1.94
NIPBL-206ENST00000509429 RP1P56715 2156 aa2.9□□□□□ -1.94
NIPBL-206ENST00000509429 CHD7Q9P2D1 2997 aa2.9□□□□□ -1.94
NIPBL-206ENST00000509429 IGLV10-54A0A075B6I4 117 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 TRAV40A0A0B4J280 105 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 IGLV1-47P01700 117 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 Q1RN00 199 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 CSAG1Q6PB30 78 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.9□□□□□ -1.95
NIPBL-206ENST00000509429 MIR7-3HGQ8N6C7 128 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 TMEM105Q8N8V8 129 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 Q8NAQ8 132 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 Q8NBF4 154 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 TMEM167BQ9NRX6 74 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 F5P12259 2224 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
NIPBL-206ENST00000509429 SPAG17Q6Q759 2223 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 IGLV11-55A0A075B6I3 123 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 TRAV10A0A0B4J240 114 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 TRBV6-5A0A0K0K1A5 114 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 A0A1W2PNM2 257 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 CLPSL1A2RUU4 121 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 A8MUU9 505 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 HIGD1CA8MV81 97 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 INSP01308 110 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 LINC01547P58512 204 aaPredicted RBP2.89□□□□□ -1.95
NIPBL-206ENST00000509429 TFF3Q07654 80 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 FXYD3Q14802 87 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 SDK2Q58EX2 2172 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 FAM74A4Q5TZK3 123 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 Q6ZR54 194 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 ZNF833PQ6ZTB9 187 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 Q8TAT8 98 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 CABIN1Q9Y6J0 2220 aa2.89□□□□□ -1.95
NIPBL-206ENST00000509429 INTS1Q8N201 2190 aaKnown RBP2.88□□□□□ -1.95
NIPBL-206ENST00000509429 KIAA0100Q14667 2235 aaKnown RBP2.88□□□□□ -1.95
NIPBL-206ENST00000509429 IGKV1D-37A0A075B6S9 117 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 IGHV1-18A0A0C4DH31 117 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 A0A1B0GUT8 65 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 LRCOL1A6NCL2 159 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 PMS2P5A8MQ11 134 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 IGLV1-44P01699 117 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 PATE4P0C8F1 98 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 ARL14EPLP0DKL9 152 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 CNBPP62633 177 aaKnown RBP2.88□□□□□ -1.95
NIPBL-206ENST00000509429 NREPQ16612 68 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 ENHOQ6UWT2 76 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 DEFB119Q8N690 84 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 Q9BRP9 147 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 ORMDL1Q9P0S3 153 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 TIMM8BQ9Y5J9 83 aaPredicted RBP2.88□□□□□ -1.95
NIPBL-206ENST00000509429 LENEPQ9Y5L5 61 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 U3KQA8 63 aa2.88□□□□□ -1.95
NIPBL-206ENST00000509429 PI4KAP42356 2102 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 ALPK2Q86TB3 2170 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 SHANK1Q9Y566 2161 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 IGIPA6NJ69 53 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms