RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 H7C423 109 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 VCYO14598 125 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 PHOX2AO14813 284 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 UBE2L6O14933 153 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 ZNF25P17030 456 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 RHEBQ15382 184 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 SLC7A5P1Q8MH63 180 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 OR5A1Q8NGJ0 315 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 RMI2Q96E14 147 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 LINC00526Q96FQ7 95 aa4.63□□□□□ -1.67
TOPBP1-207ENST00000509162 IGLV4-3A0A075B6K6 122 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 A0A096LNJ9 63 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 LOC389332A0A1B0GUA5 103 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 CCL25O15444 150 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 S100A8P05109 93 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 HIGD2BQ4VC39 106 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 AMMECR1LQ6DCA0 310 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 PET117Q6UWS5 81 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 TMEM18Q96B42 140 aa4.62□□□□□ -1.67
TOPBP1-207ENST00000509162 TRAV9-1A0A075B6T8 112 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 GVQW2A0A096LPI5 108 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 TRAV8-4A0A0B4J246 113 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 APOC3P02656 99 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 PPBPP02775 128 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 FCER1GP30273 86 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 XCL1P47992 114 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 CNBPP62633 177 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 CBLN2Q8IUK8 224 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 ZNF664Q8N3J9 261 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 Q8N8P6 123 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 ALKBH7Q9BT30 221 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 TIMM21Q9BVV7 248 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 RPS10P5Q9NQ39 176 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 COX11Q9Y6N1 276 aa4.61□□□□□ -1.67
TOPBP1-207ENST00000509162 SMR3BP02814 79 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-207ENST00000509162 CHTF8P0CG12 524 aa4.6□□□□□ -1.67
TOPBP1-207ENST00000509162 IFI27P40305 119 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-207ENST00000509162 C9orf163Q8N9P6 203 aa4.6□□□□□ -1.67
TOPBP1-207ENST00000509162 KIR2DL4Q99706 377 aa4.6□□□□□ -1.67
TOPBP1-207ENST00000509162 LAMTOR2Q9Y2Q5 125 aa4.6□□□□□ -1.67
TOPBP1-207ENST00000509162 CSDC2Q9Y534 153 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-207ENST00000509162 TRAV13-1A0A0B4J241 112 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 LINC01546A6NGU7 62 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 IGIPA6NJ69 53 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 PPP1R17O96001 155 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 MRPS36P82909 103 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 COX6A2Q02221 97 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 CIRBPQ14011 172 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 Q5VSD8 79 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 SDIM1Q6ZPB5 146 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 CIRBP-AS1Q8TBR5 109 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 GNB1LQ9BYB4 327 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 MAP1LC3AQ9H492 121 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 SPANXA1Q9NS26 97 aa4.59□□□□□ -1.67
TOPBP1-207ENST00000509162 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 IGHV3OR16-9A0A0B4J2B5 98 aa4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 hDV102S1A0JD36 115 aa4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 A4D1N5 150 aa4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 HNRNPA3P51991 378 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 CD164L2Q6UWJ8 174 aa4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 C2orf66Q6UXQ4 117 aa4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 AMELXQ99217 191 aa4.58□□□□□ -1.68
TOPBP1-207ENST00000509162 UBE2D1P51668 147 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 LINC00242Q5T6M2 205 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 C5orf38Q86SI9 138 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 SVBPQ8N300 66 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 C18orf32Q8TCD1 76 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 SPACA4Q8TDM5 124 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 TMEM101Q96IK0 257 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 PYGO1Q9Y3Y4 419 aa4.57□□□□□ -1.68
TOPBP1-207ENST00000509162 A0A096LNI7 61 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 IFITM10A6NMD0 228 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 SNAPINO95295 136 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 C14orf177Q52M58 125 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 C10orf25Q5T742 122 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 Q6ZRU5 148 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 PRSS3P2Q8NHM4 247 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 TOMM6Q96B49 74 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 CHAC1Q9BUX1 264 aa4.56□□□□□ -1.68
TOPBP1-207ENST00000509162 IGLV4-69A0A075B6H9 119 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 IGHV1-58A0A0C4DH39 117 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 SCO1O75880 301 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 MT-ND6P03923 174 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 VPREB1P12018 145 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 S100PP25815 95 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 FABP9Q0Z7S8 132 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 PMCHL1Q16048 86 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 FAM19A3Q7Z5A8 133 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 TMEM141Q96I45 108 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 NXT2Q9NPJ8 142 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 CYSLTR1Q9Y271 337 aa4.55□□□□□ -1.68
TOPBP1-207ENST00000509162 IGHV3-64A0A075B6Q5 118 aa4.54□□□□□ -1.68
TOPBP1-207ENST00000509162 A0A0J9YXV3 536 aa4.54□□□□□ -1.68
TOPBP1-207ENST00000509162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-207ENST00000509162 COX7A2LO14548 114 aa4.54□□□□□ -1.68
TOPBP1-207ENST00000509162 SPAG11BQ08648 103 aa4.54□□□□□ -1.68
TOPBP1-207ENST00000509162 SS18Q15532 418 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms