RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 PAEPP09466 180 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 SPINK8P0C7L1 97 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 EDDM3BP56851 147 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 RPS29P62273 56 aaKnown RBP-0.44□□□□□ -2.48
GYPB-209ENST00000508618 RPS28P62857 69 aaKnown RBP-0.44□□□□□ -2.48
GYPB-209ENST00000508618 TMEM128Q5BJH2 165 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 TMEM91Q6ZNR0 172 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 TMEM35BQ8NCS4 154 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 SKA2Q8WVK7 121 aaPredicted RBP-0.44□□□□□ -2.48
GYPB-209ENST00000508618 NPVFQ9HCQ7 196 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 DNAJC15Q9Y5T4 150 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 SBF2Q86WG5 1849 aa-0.44□□□□□ -2.48
GYPB-209ENST00000508618 IBTKQ9P2D0 1353 aaPredicted RBP-0.45□□□□□ -2.48
GYPB-209ENST00000508618 PATJQ8NI35 1801 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 PTPN23Q9H3S7 1636 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 KIF21AQ7Z4S6 1674 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 MBD5Q9P267 1494 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 FAM92AA1XBS5 289 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 CFAP126Q5VTH2 177 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 DDA1Q9BW61 102 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 TTTY10Q9BZA0 68 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 PRO3102Q9H379 93 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 SCN3BQ9NY72 215 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 LSM2Q9Y333 95 aaKnown RBP-0.45□□□□□ -2.48
GYPB-209ENST00000508618 SPCS1Q9Y6A9 102 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 V9GYQ6 96 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 LRRC37A2A6NM11 1700 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 CDC42BPAQ5VT25 1732 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 KIAA0586Q9BVV6 1533 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 ARHGEF12Q9NZN5 1544 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 CDC42BPGQ6DT37 1551 aa-0.45□□□□□ -2.48
GYPB-209ENST00000508618 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.45□□□□□ -2.48
GYPB-209ENST00000508618 ZC3H13Q5T200 1668 aaKnown RBP-0.46□□□□□ -2.48
GYPB-209ENST00000508618 A0A1B0GX51 115 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 NPFFO15130 113 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 SMIM24O75264 130 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 HLA-DRB4P13762 266 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 S100GP29377 79 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 DEFB1P60022 68 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 LINC01545Q5VT33 79 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 ATP11AUNQ6ZP68 121 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 FXYD6Q9H0Q3 95 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 SPANXCQ9NY87 97 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 NDUFA12Q9UI09 145 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 HLA-DRB4X5D2U9 266 aa-0.46□□□□□ -2.48
GYPB-209ENST00000508618 GOLGA4Q13439 2230 aaKnown RBP-0.46□□□□□ -2.48
GYPB-209ENST00000508618 DOT1LQ8TEK3 1739 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 MARF1Q9Y4F3 1742 aaKnown RBP-0.47□□□□□ -2.48
GYPB-209ENST00000508618 ARHGAP35Q9NRY4 1499 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 BTAF1O14981 1849 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 TRAV36DV7A0A075B6V5 113 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 CLPSL1A2RUU4 121 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 BCE1O60756 84 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 SCTP09683 121 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 UBE2D1P51668 147 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 WFDC6Q9BQY6 131 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 TCHHQ07283 1943 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 PLCH1Q4KWH8 1693 aa-0.47□□□□□ -2.48
GYPB-209ENST00000508618 PAPPA2Q9BXP8 1791 aa-0.47□□□□□ -2.49
GYPB-209ENST00000508618 TROQ12816 1431 aaPredicted RBP-0.47□□□□□ -2.49
GYPB-209ENST00000508618 CASKIN1Q8WXD9 1431 aa-0.47□□□□□ -2.49
GYPB-209ENST00000508618 MRC1P22897 1456 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 ADGRB1O14514 1584 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 APOC4-APOC2K7ER74 178 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 M0R2P5 195 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 SMIM6P0DI80 62 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 CMPK1P30085 196 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 DCDP81605 110 aaKnown RBP-0.48□□□□□ -2.49
GYPB-209ENST00000508618 C9orf116Q5BN46 136 aaPredicted RBP-0.48□□□□□ -2.49
GYPB-209ENST00000508618 S100A7L2Q5SY68 101 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 SPANXN1Q5VSR9 72 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 TMEM244Q5VVB8 128 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 MIC13Q5XKP0 118 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 RPL7L1Q6DKI1 246 aaKnown RBP-0.48□□□□□ -2.49
GYPB-209ENST00000508618 BAGE3Q86Y29 109 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 TCTE3Q8IZS6 198 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 VSTM2AQ8TAG5 236 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 TP53AIP1Q9HCN2 124 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 SPANXA1Q9NS26 97 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 ARAP2Q8WZ64 1704 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 WDR7Q9Y4E6 1490 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 EHBP1L1Q8N3D4 1523 aa-0.48□□□□□ -2.49
GYPB-209ENST00000508618 PREX2Q70Z35 1606 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 QRICH2Q9H0J4 1663 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 LY75O60449 1722 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 PSME4Q14997 1843 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 TNFSF15O95150 251 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 FABP1P07148 127 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 PIRTP0C851 137 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 SPAG11AQ6PDA7 123 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 SPTSSBQ8NFR3 76 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 LINC01600Q96MT4 127 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 AGPAT4-IT1Q9H0P7 198 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 RPRMQ9NS64 109 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 DAPK1P53355 1430 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 ATP10BO94823 1461 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 TULP4Q9NRJ4 1543 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 MAST1Q9Y2H9 1570 aa-0.49□□□□□ -2.49
GYPB-209ENST00000508618 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.49□□□□□ -2.49
GYPB-209ENST00000508618 C4AP0C0L4 1744 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms