RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	PCP4	P48539	62 aa		5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	UQCC3	Q6UW78	93 aa		5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	ZNF664	Q8N3J9	261 aa		5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	NRAC	Q8N912	160 aa		5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CDC42SE2	Q9NRR3	84 aa		5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	LAMTOR2	Q9Y2Q5	125 aa		5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	IGKV3OR2-268	A0A0C4DH90	116 aa		5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238	LINC00959	A0A1B0GUT2	108 aa		5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238	RPL37A	P61513	92 aa	Known RBP	5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238	SPACA4	Q8TDM5	124 aa		5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238	IMMP2L	Q96T52	175 aa		5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238	TMEM242	Q9NWH2	141 aa		5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238	PLAC8	Q9NZF1	115 aa		5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238	LINC00474	Q9P2X8	69 aa		5.05	□□□□□ -1.6
UBE2D3-222	ENST00000508238		A0A087WYN8	130 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238		K7EMI3	77 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	APOM	O95445	188 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	MRPL51	Q4U2R6	128 aa	Known RBP	5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CLLU1	Q5K131	121 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CD164L2	Q6UWJ8	174 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	TMEM136	Q6ZRR5	245 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	ORMDL3	Q8N138	153 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	TIMM21	Q9BVV7	248 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CTDSP1	Q9GZU7	261 aa		5.04	□□□□□ -1.6
UBE2D3-222	ENST00000508238	IGHV1-58	A0A0C4DH39	117 aa		5.03	□□□□□ -1.6
UBE2D3-222	ENST00000508238	SMKR1	H3BMG3	65 aa		5.03	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CHTF8	P0CG12	524 aa		5.03	□□□□□ -1.6
UBE2D3-222	ENST00000508238	XCL1	P47992	114 aa		5.03	□□□□□ -1.6
UBE2D3-222	ENST00000508238	COX6A2	Q02221	97 aa		5.03	□□□□□ -1.6
UBE2D3-222	ENST00000508238	HIGD2B	Q4VC39	106 aa		5.03	□□□□□ -1.6
UBE2D3-222	ENST00000508238		A0A1B0GXF2	115 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	LINC01549	A6NIU2	74 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238		F8WDY8	70 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	S100P	P25815	95 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	HNRNPA3	P51991	378 aa	Known RBP	5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	COX19	Q49B96	90 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	PAPPA-AS1	Q5QFB9	102 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	MRPL54	Q6P161	138 aa	Known RBP	5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	PRSS3P2	Q8NHM4	247 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	SPANXA1	Q9NS26	97 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	UBE2D4	Q9Y2X8	147 aa		5.02	□□□□□ -1.61
UBE2D3-222	ENST00000508238	TRAV9-1	A0A075B6T8	112 aa		5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238	PRSS47	A8MTI9	375 aa		5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238		D6R8Y8	96 aa		5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238	COX7A2L	O14548	114 aa		5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238	IFI27	P40305	119 aa	Predicted RBP	5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238	SERTAD4-AS1	Q5TG53	156 aa		5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238		Q6ZRU5	148 aa		5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238	PRELID3A	Q96N28	172 aa		5.01	□□□□□ -1.61
UBE2D3-222	ENST00000508238	MRPS36	P82909	103 aa	Known RBP	5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	SYCN	Q0VAF6	134 aa		5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	ORMDL2	Q53FV1	153 aa		5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	FAM104A	Q969W3	186 aa		5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	SMIM2	Q9BVW6	85 aa		5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	SEC11C	Q9BY50	192 aa		5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	MAP1LC3A	Q9H492	121 aa		5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	NXT2	Q9NPJ8	142 aa	Known RBP	5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	PYGO1	Q9Y3Y4	419 aa		5	□□□□□ -1.61
UBE2D3-222	ENST00000508238	PKHD1L1	Q86WI1	4243 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238	FAT3	Q8TDW7	4589 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238		A0A096LNI7	61 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238	TMEM218	A2RU14	115 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238	SEC11A	P67812	179 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238	MAJIN	Q3KP22	176 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238		Q6ZN92	141 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238	C7orf33	Q8WU49	177 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238	CARD19	Q96LW7	228 aa		4.99	□□□□□ -1.61
UBE2D3-222	ENST00000508238	TRAV13-1	A0A0B4J241	112 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238	IGKV2-24	A0A0C4DH68	120 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238	NPY	P01303	97 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238		Q6ZUT4	128 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238	STPG4	Q8N801	248 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238	LINC00526	Q96FQ7	95 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238	C2orf48	Q96LS8	159 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238	C2orf88	Q9BSF0	95 aa		4.98	□□□□□ -1.61
UBE2D3-222	ENST00000508238	IGLV4-69	A0A075B6H9	119 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	MT1HL1	P0DM35	61 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	RPL39	P62891	51 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	NDUFA5	Q16718	116 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	RNASE13	Q5GAN3	156 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	TEX43	Q6ZNM6	134 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238		Q8N8P6	123 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	OR10D4P	Q8NGN7	298 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	VCX2	Q9H322	139 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	CYSLTR1	Q9Y271	337 aa		4.97	□□□□□ -1.61
UBE2D3-222	ENST00000508238	LOC107984640	A0A0U1RRK4	108 aa		4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	LOC389332	A0A1B0GUA5	103 aa		4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	MT-ND6	P03923	174 aa		4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	PRR3	P79522	188 aa	Known RBP	4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	C5orf38	Q86SI9	138 aa		4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	TMEM141	Q96I45	108 aa		4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	CAMK2N2	Q96S95	79 aa		4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	GNB1L	Q9BYB4	327 aa		4.96	□□□□□ -1.62
UBE2D3-222	ENST00000508238	IFITM10	A6NMD0	228 aa		4.95	□□□□□ -1.62
UBE2D3-222	ENST00000508238	RHEB	Q15382	184 aa		4.95	□□□□□ -1.62
UBE2D3-222	ENST00000508238	LINC01561	Q8N1V8	128 aa		4.95	□□□□□ -1.62
UBE2D3-222	ENST00000508238	OPRPN	Q99935	248 aa	Predicted RBP	4.95	□□□□□ -1.62
UBE2D3-222	ENST00000508238	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms