RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 HBDP02042 147 aa9.72□□□□□ -0.85
RNF4-210ENST00000508235 LINC01620Q4KN68 170 aa9.72□□□□□ -0.85
RNF4-210ENST00000508235 URB1-AS1Q96HZ7 61 aa9.72□□□□□ -0.85
RNF4-210ENST00000508235 Q6ZSA8 131 aa9.71□□□□□ -0.86
RNF4-210ENST00000508235 FAM19A3Q7Z5A8 133 aa9.71□□□□□ -0.86
RNF4-210ENST00000508235 OR10D4PQ8NGN7 298 aa9.71□□□□□ -0.86
RNF4-210ENST00000508235 PKIGQ9Y2B9 76 aa9.71□□□□□ -0.86
RNF4-210ENST00000508235 A0A087WZ39 114 aa9.7□□□□□ -0.86
RNF4-210ENST00000508235 XGP55808 180 aa9.7□□□□□ -0.86
RNF4-210ENST00000508235 HERVK_113P63121 156 aa9.7□□□□□ -0.86
RNF4-210ENST00000508235 PKHD1P08F94 4074 aa9.7□□□□□ -0.86
RNF4-210ENST00000508235 F8WDY8 70 aa9.69□□□□□ -0.86
RNF4-210ENST00000508235 ATP5LO75964 103 aa9.69□□□□□ -0.86
RNF4-210ENST00000508235 SLPIP03973 132 aa9.69□□□□□ -0.86
RNF4-210ENST00000508235 PMVKQ15126 192 aa9.69□□□□□ -0.86
RNF4-210ENST00000508235 ZC2HC1BQ5TFG8 222 aa9.69□□□□□ -0.86
RNF4-210ENST00000508235 BAGE3Q86Y29 109 aa9.69□□□□□ -0.86
RNF4-210ENST00000508235 LINC01561Q8N1V8 128 aa9.69□□□□□ -0.86
RNF4-210ENST00000508235 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
RNF4-210ENST00000508235 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 A0A096LNJ9 63 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 SCO1O75880 301 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 SYCNQ0VAF6 134 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 C2orf48Q96LS8 159 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 FAM30AQ9NZY2 134 aa9.68□□□□□ -0.86
RNF4-210ENST00000508235 HSBP1O75506 76 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 S100A1P23297 94 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 COX6A2Q02221 97 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 PMCHL1Q16048 86 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 SDIM1Q6ZPB5 146 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 CAMK2N2Q96S95 79 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
RNF4-210ENST00000508235 DNAH11Q96DT5 4516 aa9.65□□□□□ -0.86
RNF4-210ENST00000508235 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
RNF4-210ENST00000508235 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
RNF4-210ENST00000508235 LINC00526Q96FQ7 95 aa9.65□□□□□ -0.86
RNF4-210ENST00000508235 PACRGQ96M98 296 aaPredicted RBP9.65□□□□□ -0.86
RNF4-210ENST00000508235 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
RNF4-210ENST00000508235 NDUFA6P56556 154 aa9.64□□□□□ -0.87
RNF4-210ENST00000508235 Q8N1X5 172 aa9.64□□□□□ -0.87
RNF4-210ENST00000508235 NDUFA1O15239 70 aa9.63□□□□□ -0.87
RNF4-210ENST00000508235 PRSS2P07478 247 aa9.63□□□□□ -0.87
RNF4-210ENST00000508235 LINC00469Q8N7U9 141 aa9.63□□□□□ -0.87
RNF4-210ENST00000508235 CDKN2A-AS1Q9UH64 79 aa9.63□□□□□ -0.87
RNF4-210ENST00000508235 KIAA1109Q2LD37 5005 aa9.62□□□□□ -0.87
RNF4-210ENST00000508235 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
RNF4-210ENST00000508235 SERF1AO75920 110 aa9.62□□□□□ -0.87
RNF4-210ENST00000508235 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
RNF4-210ENST00000508235 Q6ZRU5 148 aa9.62□□□□□ -0.87
RNF4-210ENST00000508235 SCXQ7RTU7 201 aa9.62□□□□□ -0.87
RNF4-210ENST00000508235 LINC00474Q9P2X8 69 aa9.62□□□□□ -0.87
RNF4-210ENST00000508235 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
RNF4-210ENST00000508235 HAMPP81172 84 aa9.61□□□□□ -0.87
RNF4-210ENST00000508235 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
RNF4-210ENST00000508235 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
RNF4-210ENST00000508235 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
RNF4-210ENST00000508235 MRPL35Q9NZE8 188 aaKnown RBP9.61□□□□□ -0.87
RNF4-210ENST00000508235 H3BRM9 83 aa9.6□□□□□ -0.87
RNF4-210ENST00000508235 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
RNF4-210ENST00000508235 Q8IZM0 81 aa9.6□□□□□ -0.87
RNF4-210ENST00000508235 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
RNF4-210ENST00000508235 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
RNF4-210ENST00000508235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
RNF4-210ENST00000508235 LOC107984640A0A0U1RRK4 108 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 EPM2AB3EWF7 344 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 CKS1BP61024 79 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 SPACA4Q8TDM5 124 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
RNF4-210ENST00000508235 TRAV12-1A0A0B4J245 112 aa9.58□□□□□ -0.88
RNF4-210ENST00000508235 LEPROTL1O95214 131 aa9.58□□□□□ -0.88
RNF4-210ENST00000508235 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
RNF4-210ENST00000508235 HSPB8Q9UJY1 196 aa9.58□□□□□ -0.88
RNF4-210ENST00000508235 IGKV2-24A0A0C4DH68 120 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 SMIM1B2RUZ4 78 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BKO60814 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BJP06899 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 CHTF8P0CG12 524 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BOP23527 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BBP33778 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 CXCL5P42830 114 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BDP58876 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 LINC00310P59036 64 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BCP62807 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST2H2BEQ16778 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BHQ93079 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BNQ99877 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 HIST1H2BMQ99879 126 aa9.57□□□□□ -0.88
RNF4-210ENST00000508235 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
RNF4-210ENST00000508235 A0A096LNI7 61 aa9.56□□□□□ -0.88
RNF4-210ENST00000508235 MAJINQ3KP22 176 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms