RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-209ENST00000506632 PNRC1Q12796 327 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-209ENST00000506632 MAJINQ3KP22 176 aa5.71□□□□□ -1.5
PDLIM5-209ENST00000506632 CARD19Q96LW7 228 aa5.71□□□□□ -1.5
PDLIM5-209ENST00000506632 TRAV13-1A0A0B4J241 112 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 COX7A2LO14548 114 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 TRIAP1O43715 76 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 MRPS36P82909 103 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 SYCNQ0VAF6 134 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 ORMDL3Q8N138 153 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 DPH3Q96FX2 82 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 CTDSP1Q9GZU7 261 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 SPANXA1Q9NS26 97 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 PKIGQ9Y2B9 76 aa5.7□□□□□ -1.5
PDLIM5-209ENST00000506632 IGLV4-69A0A075B6H9 119 aa5.69□□□□□ -1.5
PDLIM5-209ENST00000506632 CLLU1Q5K131 121 aa5.69□□□□□ -1.5
PDLIM5-209ENST00000506632 TMEM136Q6ZRR5 245 aa5.69□□□□□ -1.5
PDLIM5-209ENST00000506632 Q6ZRU5 148 aa5.69□□□□□ -1.5
PDLIM5-209ENST00000506632 STPG4Q8N801 248 aa5.69□□□□□ -1.5
PDLIM5-209ENST00000506632 PRELID3AQ96N28 172 aa5.69□□□□□ -1.5
PDLIM5-209ENST00000506632 LINC00474Q9P2X8 69 aa5.69□□□□□ -1.5
PDLIM5-209ENST00000506632 IGHV3OR16-9A0A0B4J2B5 98 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 MT-ND4LP03901 98 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 MT1HL1P0DM35 61 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 RAB14P61106 215 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 C5orf38Q86SI9 138 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 C2orf48Q96LS8 159 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 OPRPNQ99935 248 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 LAMTOR2Q9Y2Q5 125 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 PYGO1Q9Y3Y4 419 aa5.68□□□□□ -1.5
PDLIM5-209ENST00000506632 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-209ENST00000506632 IGLV4-3A0A075B6K6 122 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 LOC107984640A0A0U1RRK4 108 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 APOMO95445 188 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 IFITM2Q01629 132 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 SPAG11BQ08648 103 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 SERTAD4-AS1Q5TG53 156 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 OR10D4PQ8NGN7 298 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 CAMK2N2Q96S95 79 aa5.66□□□□□ -1.5
PDLIM5-209ENST00000506632 IFITM10A6NMD0 228 aa5.65□□□□□ -1.5
PDLIM5-209ENST00000506632 F8WDY8 70 aa5.65□□□□□ -1.5
PDLIM5-209ENST00000506632 ADCYAP1P18509 176 aa5.65□□□□□ -1.5
PDLIM5-209ENST00000506632 RAB5AP20339 215 aa5.65□□□□□ -1.5
PDLIM5-209ENST00000506632 IFI27P40305 119 aaPredicted RBP5.65□□□□□ -1.5
PDLIM5-209ENST00000506632 Q8N8P6 123 aa5.65□□□□□ -1.5
PDLIM5-209ENST00000506632 MAP1LC3AQ9H492 121 aa5.65□□□□□ -1.5
PDLIM5-209ENST00000506632 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 GAGE2BQ13066 116 aa5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 LINC00242Q5T6M2 205 aa5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 ORAOV1Q8WV07 137 aa5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 IMMP2LQ96T52 175 aa5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 MRPL35Q9NZE8 188 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
PDLIM5-209ENST00000506632 A0A087WZ39 114 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 LOC389332A0A1B0GUA5 103 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 TMEM218A2RU14 115 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 K7EMI3 77 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 KIAA0087Q14695 138 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 LINC00173Q6ZV60 143 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 TMEM141Q96I45 108 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 AMELXQ99217 191 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 CYSLTR1Q9Y271 337 aa5.63□□□□□ -1.51
PDLIM5-209ENST00000506632 TRAV9-1A0A075B6T8 112 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 TGIF2-C20orf24A0A0A6YYL0 155 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 A0A0J9YXV3 536 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 NDUFA1O15239 70 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 NPSP0C0P6 89 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 TLX1NBP0CAT3 122 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 UBE2D1P51668 147 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 SRSF9Q13242 221 aaKnown RBP eCLIP5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 ORMDL2Q53FV1 153 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 C9orf116Q5BN46 136 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 C10orf25Q5T742 122 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 Q6ZRP5 223 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 LINC01561Q8N1V8 128 aa5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 NXT2Q9NPJ8 142 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-209ENST00000506632 IGIPA6NJ69 53 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 TNXBP22105 4242 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 RPL18AQ02543 176 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 UNQ6190/PRO20217Q6UXQ8 127 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 TEX43Q6ZNM6 134 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 FAM19A3Q7Z5A8 133 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 LINC01600Q96MT4 127 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 SEC11CQ9BY50 192 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 C6orf48Q9UBA6 75 aa5.61□□□□□ -1.51
PDLIM5-209ENST00000506632 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
PDLIM5-209ENST00000506632 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
PDLIM5-209ENST00000506632 TRBV30A0A0K0K1B3 111 aa5.59□□□□□ -1.51
PDLIM5-209ENST00000506632 KIAA1644Q3SXP7 199 aa5.59□□□□□ -1.51
PDLIM5-209ENST00000506632 C10orf91Q5T1B1 145 aa5.59□□□□□ -1.51
PDLIM5-209ENST00000506632 Q6ZN92 141 aa5.59□□□□□ -1.51
PDLIM5-209ENST00000506632 TIMM17AQ99595 171 aa5.59□□□□□ -1.51
PDLIM5-209ENST00000506632 C2orf88Q9BSF0 95 aa5.59□□□□□ -1.51
PDLIM5-209ENST00000506632 VCX2Q9H322 139 aa5.59□□□□□ -1.51
PDLIM5-209ENST00000506632 LINC01546A6NGU7 62 aa5.58□□□□□ -1.52
PDLIM5-209ENST00000506632 C2orf82Q6UX34 121 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms