RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SMCO4Q9NRQ5 59 aa11.73□□□□□ -0.53
PDLIM7-216ENST00000506537 IGHV3OR16-9A0A0B4J2B5 98 aa11.72□□□□□ -0.53
PDLIM7-216ENST00000506537 SMR3BP02814 79 aaPredicted RBP11.72□□□□□ -0.53
PDLIM7-216ENST00000506537 TEX43Q6ZNM6 134 aa11.72□□□□□ -0.53
PDLIM7-216ENST00000506537 URB1-AS1Q96HZ7 61 aa11.72□□□□□ -0.53
PDLIM7-216ENST00000506537 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 PANO1I0J062 215 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 NPSP0C0P6 89 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 MALP21145 153 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 UBE2D1P51668 147 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 FA2HQ7L5A8 372 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 TIMM17AQ99595 171 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.71□□□□□ -0.53
PDLIM7-216ENST00000506537 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
PDLIM7-216ENST00000506537 G0S2P27469 103 aa11.7□□□□□ -0.54
PDLIM7-216ENST00000506537 Q6ZN92 141 aa11.7□□□□□ -0.54
PDLIM7-216ENST00000506537 COX6A2Q02221 97 aa11.69□□□□□ -0.54
PDLIM7-216ENST00000506537 VCX2Q9H322 139 aa11.69□□□□□ -0.54
PDLIM7-216ENST00000506537 A0A096LNJ9 63 aa11.68□□□□□ -0.54
PDLIM7-216ENST00000506537 ERASQ7Z444 233 aa11.68□□□□□ -0.54
PDLIM7-216ENST00000506537 CIRBP-AS1Q8TBR5 109 aa11.68□□□□□ -0.54
PDLIM7-216ENST00000506537 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
PDLIM7-216ENST00000506537 C2orf88Q9BSF0 95 aa11.68□□□□□ -0.54
PDLIM7-216ENST00000506537 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
PDLIM7-216ENST00000506537 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
PDLIM7-216ENST00000506537 Q5VSD8 79 aa11.67□□□□□ -0.54
PDLIM7-216ENST00000506537 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-216ENST00000506537 CARD19Q96LW7 228 aa11.66□□□□□ -0.54
PDLIM7-216ENST00000506537 A0A087WZ39 114 aa11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 EPM2AB3EWF7 344 aa11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 APOMO95445 188 aa11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 CHTF8P0CG12 524 aa11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 SPAG11BQ08648 103 aa11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 FAM19A3Q7Z5A8 133 aa11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 ORAOV1Q8WV07 137 aa11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 SRRM2Q9UQ35 2752 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-216ENST00000506537 LINC00614P0C842 121 aa11.64□□□□□ -0.55
PDLIM7-216ENST00000506537 SYCNQ0VAF6 134 aa11.64□□□□□ -0.55
PDLIM7-216ENST00000506537 PAPPA-AS1Q5QFB9 102 aa11.64□□□□□ -0.55
PDLIM7-216ENST00000506537 Q6ZRU5 148 aa11.64□□□□□ -0.55
PDLIM7-216ENST00000506537 OR10D4PQ8NGN7 298 aa11.64□□□□□ -0.55
PDLIM7-216ENST00000506537 LINC01549A6NIU2 74 aa11.63□□□□□ -0.55
PDLIM7-216ENST00000506537 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
PDLIM7-216ENST00000506537 C2orf48Q96LS8 159 aa11.63□□□□□ -0.55
PDLIM7-216ENST00000506537 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
PDLIM7-216ENST00000506537 SPACA4Q8TDM5 124 aa11.62□□□□□ -0.55
PDLIM7-216ENST00000506537 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
PDLIM7-216ENST00000506537 COLCA2A8K830 154 aa11.61□□□□□ -0.55
PDLIM7-216ENST00000506537 TRGC2P03986 189 aa11.61□□□□□ -0.55
PDLIM7-216ENST00000506537 CAMK2N2Q96S95 79 aa11.61□□□□□ -0.55
PDLIM7-216ENST00000506537 A0A096LNI7 61 aa11.6□□□□□ -0.55
PDLIM7-216ENST00000506537 SCO1O75880 301 aa11.6□□□□□ -0.55
PDLIM7-216ENST00000506537 HBDP02042 147 aa11.6□□□□□ -0.55
PDLIM7-216ENST00000506537 RAB5BP61020 215 aa11.6□□□□□ -0.55
PDLIM7-216ENST00000506537 CST9LQ9H4G1 147 aa11.6□□□□□ -0.55
PDLIM7-216ENST00000506537 IGKV2-24A0A0C4DH68 120 aa11.59□□□□□ -0.55
PDLIM7-216ENST00000506537 FAM229AH3BQW9 127 aa11.59□□□□□ -0.55
PDLIM7-216ENST00000506537 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
PDLIM7-216ENST00000506537 PDZD11Q5EBL8 140 aa11.59□□□□□ -0.55
PDLIM7-216ENST00000506537 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
PDLIM7-216ENST00000506537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.58□□□□□ -0.56
PDLIM7-216ENST00000506537 HERVK_113P63121 156 aa11.58□□□□□ -0.56
PDLIM7-216ENST00000506537 CDKN2A-AS1Q9UH64 79 aa11.58□□□□□ -0.56
PDLIM7-216ENST00000506537 A0A087WYN8 130 aa11.57□□□□□ -0.56
PDLIM7-216ENST00000506537 SEC11AP67812 179 aa11.57□□□□□ -0.56
PDLIM7-216ENST00000506537 PMVKQ15126 192 aa11.57□□□□□ -0.56
PDLIM7-216ENST00000506537 C10orf25Q5T742 122 aa11.57□□□□□ -0.56
PDLIM7-216ENST00000506537 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
PDLIM7-216ENST00000506537 CHCHD1Q96BP2 118 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-216ENST00000506537 GEMIN7Q9H840 131 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-216ENST00000506537 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
PDLIM7-216ENST00000506537 F8WDY8 70 aa11.55□□□□□ -0.56
PDLIM7-216ENST00000506537 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
PDLIM7-216ENST00000506537 MRPL35Q9NZE8 188 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-216ENST00000506537 PLAC8Q9NZF1 115 aa11.55□□□□□ -0.56
PDLIM7-216ENST00000506537 IGLV5-45A0A087WSX0 123 aa11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 NDUFA1O15239 70 aa11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 LINC00310P59036 64 aa11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 KRTAP10-4P60372 401 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 RNF151Q2KHN1 245 aa11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 C2orf82Q6UX34 121 aa11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 LINC00469Q8N7U9 141 aa11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 PKIGQ9Y2B9 76 aa11.54□□□□□ -0.56
PDLIM7-216ENST00000506537 PKHD1L1Q86WI1 4243 aa11.53□□□□□ -0.56
PDLIM7-216ENST00000506537 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
PDLIM7-216ENST00000506537 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
PDLIM7-216ENST00000506537 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
PDLIM7-216ENST00000506537 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
PDLIM7-216ENST00000506537 MYCBP2O75592 4640 aa11.52□□□□□ -0.57
PDLIM7-216ENST00000506537 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.57
PDLIM7-216ENST00000506537 BAGE3Q86Y29 109 aa11.52□□□□□ -0.57
PDLIM7-216ENST00000506537 ATP5LO75964 103 aa11.51□□□□□ -0.57
PDLIM7-216ENST00000506537 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
PDLIM7-216ENST00000506537 IGLC3P0DOY3 106 aa11.51□□□□□ -0.57
PDLIM7-216ENST00000506537 NDUFA6P56556 154 aa11.51□□□□□ -0.57
PDLIM7-216ENST00000506537 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
PDLIM7-216ENST00000506537 STPG4Q8N801 248 aa11.51□□□□□ -0.57
PDLIM7-216ENST00000506537 TOMM7Q9P0U1 55 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms