RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 OPRPNQ99935 248 aaPredicted RBP9.9□□□□□ -0.82
PDLIM7-213ENST00000505074 SMIM2Q9BVW6 85 aa9.9□□□□□ -0.82
PDLIM7-213ENST00000505074 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
PDLIM7-213ENST00000505074 HBBP68871 147 aa9.89□□□□□ -0.83
PDLIM7-213ENST00000505074 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
PDLIM7-213ENST00000505074 C9orf116Q5BN46 136 aaPredicted RBP9.89□□□□□ -0.83
PDLIM7-213ENST00000505074 ORAOV1Q8WV07 137 aa9.89□□□□□ -0.83
PDLIM7-213ENST00000505074 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
PDLIM7-213ENST00000505074 A0A1W2PNN7 141 aa9.88□□□□□ -0.83
PDLIM7-213ENST00000505074 IFITM10A6NMD0 228 aa9.88□□□□□ -0.83
PDLIM7-213ENST00000505074 MT-ND6P03923 174 aa9.88□□□□□ -0.83
PDLIM7-213ENST00000505074 OR10D4PQ8NGN7 298 aa9.88□□□□□ -0.83
PDLIM7-213ENST00000505074 SPANXA1Q9NS26 97 aa9.88□□□□□ -0.83
PDLIM7-213ENST00000505074 NPYP01303 97 aa9.87□□□□□ -0.83
PDLIM7-213ENST00000505074 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
PDLIM7-213ENST00000505074 NDUFA1O15239 70 aa9.85□□□□□ -0.83
PDLIM7-213ENST00000505074 RAB5AP20339 215 aa9.85□□□□□ -0.83
PDLIM7-213ENST00000505074 SRSF9Q13242 221 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDLIM7-213ENST00000505074 PHF5AQ7RTV0 110 aaKnown RBP9.85□□□□□ -0.83
PDLIM7-213ENST00000505074 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
PDLIM7-213ENST00000505074 TGIF2-C20orf24A0A0A6YYL0 155 aa9.84□□□□□ -0.83
PDLIM7-213ENST00000505074 PPBPP02775 128 aa9.84□□□□□ -0.83
PDLIM7-213ENST00000505074 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
PDLIM7-213ENST00000505074 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
PDLIM7-213ENST00000505074 IMMP2LQ96T52 175 aa9.84□□□□□ -0.83
PDLIM7-213ENST00000505074 SMDT1Q9H4I9 107 aa9.84□□□□□ -0.83
PDLIM7-213ENST00000505074 A0A1B0GXF2 115 aa9.83□□□□□ -0.84
PDLIM7-213ENST00000505074 IFI27P40305 119 aaPredicted RBP9.83□□□□□ -0.84
PDLIM7-213ENST00000505074 MRPS36P82909 103 aaKnown RBP9.83□□□□□ -0.84
PDLIM7-213ENST00000505074 ORMDL3Q8N138 153 aa9.83□□□□□ -0.84
PDLIM7-213ENST00000505074 MRPL35Q9NZE8 188 aaKnown RBP9.83□□□□□ -0.84
PDLIM7-213ENST00000505074 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
PDLIM7-213ENST00000505074 TMEM136Q6ZRR5 245 aa9.82□□□□□ -0.84
PDLIM7-213ENST00000505074 PRELID3AQ96N28 172 aa9.82□□□□□ -0.84
PDLIM7-213ENST00000505074 MUC2Q02817 5179 aa9.82□□□□□ -0.84
PDLIM7-213ENST00000505074 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
PDLIM7-213ENST00000505074 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
PDLIM7-213ENST00000505074 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
PDLIM7-213ENST00000505074 F8WDY8 70 aa9.8□□□□□ -0.84
PDLIM7-213ENST00000505074 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
PDLIM7-213ENST00000505074 C10orf25Q5T742 122 aa9.8□□□□□ -0.84
PDLIM7-213ENST00000505074 ATP5L2Q7Z4Y8 100 aa9.8□□□□□ -0.84
PDLIM7-213ENST00000505074 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
PDLIM7-213ENST00000505074 GAGE2DQ9UEU5 116 aa9.8□□□□□ -0.84
PDLIM7-213ENST00000505074 A0A087WZ39 114 aa9.79□□□□□ -0.84
PDLIM7-213ENST00000505074 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
PDLIM7-213ENST00000505074 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
PDLIM7-213ENST00000505074 TMEM141Q96I45 108 aa9.78□□□□□ -0.84
PDLIM7-213ENST00000505074 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
PDLIM7-213ENST00000505074 FAT4Q6V0I7 4981 aa9.77□□□□□ -0.85
PDLIM7-213ENST00000505074 IGLV4-3A0A075B6K6 122 aa9.77□□□□□ -0.85
PDLIM7-213ENST00000505074 TEX43Q6ZNM6 134 aa9.77□□□□□ -0.85
PDLIM7-213ENST00000505074 C2orf88Q9BSF0 95 aa9.77□□□□□ -0.85
PDLIM7-213ENST00000505074 UBE2BP63146 152 aa9.76□□□□□ -0.85
PDLIM7-213ENST00000505074 LCE2AQ5TA79 106 aaPredicted RBP9.76□□□□□ -0.85
PDLIM7-213ENST00000505074 Q6ZN92 141 aa9.76□□□□□ -0.85
PDLIM7-213ENST00000505074 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
PDLIM7-213ENST00000505074 PYGO1Q9Y3Y4 419 aa9.76□□□□□ -0.85
PDLIM7-213ENST00000505074 IGLV7-43P04211 117 aa9.75□□□□□ -0.85
PDLIM7-213ENST00000505074 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
PDLIM7-213ENST00000505074 LINC00242Q5T6M2 205 aa9.75□□□□□ -0.85
PDLIM7-213ENST00000505074 PACRGQ96M98 296 aaPredicted RBP9.75□□□□□ -0.85
PDLIM7-213ENST00000505074 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
PDLIM7-213ENST00000505074 M0QXV9 152 aa9.74□□□□□ -0.85
PDLIM7-213ENST00000505074 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
PDLIM7-213ENST00000505074 LAMTOR2Q9Y2Q5 125 aa9.74□□□□□ -0.85
PDLIM7-213ENST00000505074 TRBV30A0A0K0K1B3 111 aa9.73□□□□□ -0.85
PDLIM7-213ENST00000505074 PRSS2P07478 247 aa9.73□□□□□ -0.85
PDLIM7-213ENST00000505074 ZC2HC1BQ5TFG8 222 aa9.73□□□□□ -0.85
PDLIM7-213ENST00000505074 C2orf66Q6UXQ4 117 aa9.73□□□□□ -0.85
PDLIM7-213ENST00000505074 TOMM7Q9P0U1 55 aa9.73□□□□□ -0.85
PDLIM7-213ENST00000505074 MT-ND4LP03901 98 aa9.72□□□□□ -0.85
PDLIM7-213ENST00000505074 UBE2D1P51668 147 aa9.72□□□□□ -0.85
PDLIM7-213ENST00000505074 PNRC1Q12796 327 aaPredicted RBP9.72□□□□□ -0.85
PDLIM7-213ENST00000505074 KIAA0087Q14695 138 aa9.72□□□□□ -0.85
PDLIM7-213ENST00000505074 Q8N8P6 123 aa9.72□□□□□ -0.85
PDLIM7-213ENST00000505074 VCX2Q9H322 139 aa9.72□□□□□ -0.85
PDLIM7-213ENST00000505074 NDUFC2-KCTD14E9PQ53 114 aa9.71□□□□□ -0.86
PDLIM7-213ENST00000505074 ORMDL2Q53FV1 153 aa9.71□□□□□ -0.86
PDLIM7-213ENST00000505074 KRTAP11-1Q8IUC1 163 aa9.71□□□□□ -0.86
PDLIM7-213ENST00000505074 PRR26Q8N8Z3 221 aa9.71□□□□□ -0.86
PDLIM7-213ENST00000505074 ANAPC16Q96DE5 110 aa9.71□□□□□ -0.86
PDLIM7-213ENST00000505074 H0Y9J4 135 aa9.7□□□□□ -0.86
PDLIM7-213ENST00000505074 CKS1BP61024 79 aa9.7□□□□□ -0.86
PDLIM7-213ENST00000505074 PRR4Q16378 134 aa9.7□□□□□ -0.86
PDLIM7-213ENST00000505074 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
PDLIM7-213ENST00000505074 RAB14P61106 215 aa9.69□□□□□ -0.86
PDLIM7-213ENST00000505074 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
PDLIM7-213ENST00000505074 LINC00173Q6ZV60 143 aa9.68□□□□□ -0.86
PDLIM7-213ENST00000505074 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
PDLIM7-213ENST00000505074 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
PDLIM7-213ENST00000505074 CTDSP1Q9GZU7 261 aa9.68□□□□□ -0.86
PDLIM7-213ENST00000505074 C9orf129Q5T035 196 aaKnown RBP9.67□□□□□ -0.86
PDLIM7-213ENST00000505074 AMELXQ99217 191 aa9.67□□□□□ -0.86
PDLIM7-213ENST00000505074 ALKBH7Q9BT30 221 aaPredicted RBP9.67□□□□□ -0.86
PDLIM7-213ENST00000505074 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
PDLIM7-213ENST00000505074 GEMIN7Q9H840 131 aaKnown RBP9.66□□□□□ -0.86
PDLIM7-213ENST00000505074 NXT2Q9NPJ8 142 aaKnown RBP9.66□□□□□ -0.86
PDLIM7-213ENST00000505074 K7EMI3 77 aa9.65□□□□□ -0.86
PDLIM7-213ENST00000505074 HERVK_113P63121 156 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms