RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 IFITM10A6NMD0 228 aa11.12□□□□□ -0.63
CLDND1-209ENST00000503621 SLC7A5P1Q8MH63 180 aa11.12□□□□□ -0.63
CLDND1-209ENST00000503621 C18orf32Q8TCD1 76 aa11.12□□□□□ -0.63
CLDND1-209ENST00000503621 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
CLDND1-209ENST00000503621 C2orf88Q9BSF0 95 aa11.12□□□□□ -0.63
CLDND1-209ENST00000503621 VCX2Q9H322 139 aa11.12□□□□□ -0.63
CLDND1-209ENST00000503621 A0A087WZ39 114 aa11.11□□□□□ -0.63
CLDND1-209ENST00000503621 UBE2D1P51668 147 aa11.11□□□□□ -0.63
CLDND1-209ENST00000503621 RAB5BP61020 215 aa11.11□□□□□ -0.63
CLDND1-209ENST00000503621 LINC00242Q5T6M2 205 aa11.11□□□□□ -0.63
CLDND1-209ENST00000503621 LINC00173Q6ZV60 143 aa11.11□□□□□ -0.63
CLDND1-209ENST00000503621 OPRPNQ99935 248 aaPredicted RBP11.11□□□□□ -0.63
CLDND1-209ENST00000503621 RNASE13Q5GAN3 156 aaKnown RBP11.1□□□□□ -0.63
CLDND1-209ENST00000503621 FA2HQ7L5A8 372 aa11.1□□□□□ -0.63
CLDND1-209ENST00000503621 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
CLDND1-209ENST00000503621 LINC00614P0C842 121 aa11.09□□□□□ -0.63
CLDND1-209ENST00000503621 MALP21145 153 aa11.09□□□□□ -0.63
CLDND1-209ENST00000503621 RNF151Q2KHN1 245 aa11.09□□□□□ -0.63
CLDND1-209ENST00000503621 KRTAP17-1Q9BYP8 105 aa11.08□□□□□ -0.64
CLDND1-209ENST00000503621 LINC00474Q9P2X8 69 aa11.07□□□□□ -0.64
CLDND1-209ENST00000503621 DNAH8Q96JB1 4490 aa11.06□□□□□ -0.64
CLDND1-209ENST00000503621 HERVK_113P63121 156 aa11.06□□□□□ -0.64
CLDND1-209ENST00000503621 LINC01620Q4KN68 170 aa11.06□□□□□ -0.64
CLDND1-209ENST00000503621 HIGD2BQ4VC39 106 aa11.06□□□□□ -0.64
CLDND1-209ENST00000503621 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
CLDND1-209ENST00000503621 SCGB3A1Q96QR1 104 aa11.06□□□□□ -0.64
CLDND1-209ENST00000503621 IGLV4-69A0A075B6H9 119 aa11.05□□□□□ -0.64
CLDND1-209ENST00000503621 EPM2AB3EWF7 344 aa11.05□□□□□ -0.64
CLDND1-209ENST00000503621 SYCNQ0VAF6 134 aa11.05□□□□□ -0.64
CLDND1-209ENST00000503621 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
CLDND1-209ENST00000503621 CIRBP-AS1Q8TBR5 109 aa11.05□□□□□ -0.64
CLDND1-209ENST00000503621 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
CLDND1-209ENST00000503621 URB1-AS1Q96HZ7 61 aa11.05□□□□□ -0.64
CLDND1-209ENST00000503621 A0A096LNJ9 63 aa11.04□□□□□ -0.64
CLDND1-209ENST00000503621 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
CLDND1-209ENST00000503621 C5orf38Q86SI9 138 aa11.04□□□□□ -0.64
CLDND1-209ENST00000503621 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
CLDND1-209ENST00000503621 MRPL35Q9NZE8 188 aaKnown RBP11.04□□□□□ -0.64
CLDND1-209ENST00000503621 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
CLDND1-209ENST00000503621 SPACA4Q8TDM5 124 aa11.03□□□□□ -0.64
CLDND1-209ENST00000503621 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
CLDND1-209ENST00000503621 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
CLDND1-209ENST00000503621 HBDP02042 147 aa11.02□□□□□ -0.65
CLDND1-209ENST00000503621 COX6A2Q02221 97 aa11.02□□□□□ -0.65
CLDND1-209ENST00000503621 PMVKQ15126 192 aa11.02□□□□□ -0.65
CLDND1-209ENST00000503621 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
CLDND1-209ENST00000503621 COLCA2A8K830 154 aa11.01□□□□□ -0.65
CLDND1-209ENST00000503621 KIAA0087Q14695 138 aa11.01□□□□□ -0.65
CLDND1-209ENST00000503621 PDZD11Q5EBL8 140 aa11.01□□□□□ -0.65
CLDND1-209ENST00000503621 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
CLDND1-209ENST00000503621 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
CLDND1-209ENST00000503621 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
CLDND1-209ENST00000503621 ATP5LO75964 103 aa11□□□□□ -0.65
CLDND1-209ENST00000503621 TLX1NBP0CAT3 122 aa11□□□□□ -0.65
CLDND1-209ENST00000503621 SPAG11BQ08648 103 aa11□□□□□ -0.65
CLDND1-209ENST00000503621 Q5VSD8 79 aa11□□□□□ -0.65
CLDND1-209ENST00000503621 ORAOV1Q8WV07 137 aa11□□□□□ -0.65
CLDND1-209ENST00000503621 SRRM2Q9UQ35 2752 aaKnown RBP10.99□□□□□ -0.65
CLDND1-209ENST00000503621 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
CLDND1-209ENST00000503621 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
CLDND1-209ENST00000503621 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
CLDND1-209ENST00000503621 NDUFA1O15239 70 aa10.98□□□□□ -0.65
CLDND1-209ENST00000503621 ODF1Q14990 250 aa10.98□□□□□ -0.65
CLDND1-209ENST00000503621 Q6ZRU5 148 aa10.98□□□□□ -0.65
CLDND1-209ENST00000503621 Q8IZM0 81 aa10.98□□□□□ -0.65
CLDND1-209ENST00000503621 TRBV30A0A0K0K1B3 111 aa10.97□□□□□ -0.65
CLDND1-209ENST00000503621 PANO1I0J062 215 aa10.97□□□□□ -0.65
CLDND1-209ENST00000503621 TRGC2P03986 189 aa10.97□□□□□ -0.65
CLDND1-209ENST00000503621 GEMIN7Q9H840 131 aaKnown RBP10.97□□□□□ -0.65
CLDND1-209ENST00000503621 VPS13BQ7Z7G8 4022 aa10.97□□□□□ -0.65
CLDND1-209ENST00000503621 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
CLDND1-209ENST00000503621 CDKN2A-AS1Q9UH64 79 aa10.96□□□□□ -0.65
CLDND1-209ENST00000503621 A0A087WYN8 130 aa10.95□□□□□ -0.66
CLDND1-209ENST00000503621 SMR3BP02814 79 aaPredicted RBP10.95□□□□□ -0.66
CLDND1-209ENST00000503621 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
CLDND1-209ENST00000503621 CXCL5P42830 114 aa10.95□□□□□ -0.66
CLDND1-209ENST00000503621 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
CLDND1-209ENST00000503621 ZC2HC1BQ5TFG8 222 aa10.95□□□□□ -0.66
CLDND1-209ENST00000503621 LINC00526Q96FQ7 95 aa10.95□□□□□ -0.66
CLDND1-209ENST00000503621 A0A0J9YXV3 536 aa10.94□□□□□ -0.66
CLDND1-209ENST00000503621 A0A096LNI7 61 aa10.93□□□□□ -0.66
CLDND1-209ENST00000503621 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
CLDND1-209ENST00000503621 FAT1Q14517 4588 aa10.92□□□□□ -0.66
CLDND1-209ENST00000503621 TRAV12-1A0A0B4J245 112 aa10.92□□□□□ -0.66
CLDND1-209ENST00000503621 HAMPP81172 84 aa10.92□□□□□ -0.66
CLDND1-209ENST00000503621 SMIM1B2RUZ4 78 aa10.91□□□□□ -0.66
CLDND1-209ENST00000503621 PACRGQ96M98 296 aaPredicted RBP10.91□□□□□ -0.66
CLDND1-209ENST00000503621 H3BRM9 83 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 HSBP1O75506 76 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 PRSS2P07478 247 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 CHTF8P0CG12 524 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 UNQ6190/PRO20217Q6UXQ8 127 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 BAGE3Q86Y29 109 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 LINC00469Q8N7U9 141 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 C6orf48Q9UBA6 75 aa10.9□□□□□ -0.66
CLDND1-209ENST00000503621 PCLOQ9Y6V0 5065 aa10.89□□□□□ -0.67
CLDND1-209ENST00000503621 IGLV5-39A0A0G2JS06 123 aa10.89□□□□□ -0.67
CLDND1-209ENST00000503621 MAJINQ3KP22 176 aa10.89□□□□□ -0.67
CLDND1-209ENST00000503621 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
CLDND1-209ENST00000503621 C10orf25Q5T742 122 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms