RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 KMT2CQ8NEZ4 4911 aaKnown RBP13.59□□□□□ -0.23
CDC42SE2-206ENST00000503291 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
CDC42SE2-206ENST00000503291 GEMIN7Q9H840 131 aaKnown RBP13.59□□□□□ -0.23
CDC42SE2-206ENST00000503291 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
CDC42SE2-206ENST00000503291 IGHV3OR16-9A0A0B4J2B5 98 aa13.58□□□□□ -0.24
CDC42SE2-206ENST00000503291 IGLC3P0DOY3 106 aa13.58□□□□□ -0.24
CDC42SE2-206ENST00000503291 FOXI1Q12951 378 aa13.58□□□□□ -0.24
CDC42SE2-206ENST00000503291 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
CDC42SE2-206ENST00000503291 HERVK_113P63121 156 aa13.57□□□□□ -0.24
CDC42SE2-206ENST00000503291 C1orf134Q5TEV5 83 aa13.57□□□□□ -0.24
CDC42SE2-206ENST00000503291 LINC01545Q5VT33 79 aa13.57□□□□□ -0.24
CDC42SE2-206ENST00000503291 Q6ZRN7 208 aaPredicted RBP13.57□□□□□ -0.24
CDC42SE2-206ENST00000503291 CHAC1Q9BUX1 264 aa13.57□□□□□ -0.24
CDC42SE2-206ENST00000503291 DNAH6Q9C0G6 4158 aa13.56□□□□□ -0.24
CDC42SE2-206ENST00000503291 C11orf86A6NJI1 115 aa13.56□□□□□ -0.24
CDC42SE2-206ENST00000503291 MAPKAPK5-AS1Q8N8E1 139 aa13.56□□□□□ -0.24
CDC42SE2-206ENST00000503291 C5orf38Q86SI9 138 aa13.56□□□□□ -0.24
CDC42SE2-206ENST00000503291 CDKN2A-AS1Q9UH64 79 aa13.55□□□□□ -0.24
CDC42SE2-206ENST00000503291 PSCAO43653 123 aa13.54□□□□□ -0.24
CDC42SE2-206ENST00000503291 LINC00469Q8N7U9 141 aa13.54□□□□□ -0.24
CDC42SE2-206ENST00000503291 DPM2O94777 84 aa13.54□□□□□ -0.24
CDC42SE2-206ENST00000503291 DNAH10Q8IVF4 4471 aa13.53□□□□□ -0.24
CDC42SE2-206ENST00000503291 IGLV5-45A0A087WSX0 123 aa13.53□□□□□ -0.24
CDC42SE2-206ENST00000503291 COX7A2LO14548 114 aa13.53□□□□□ -0.24
CDC42SE2-206ENST00000503291 PLNP26678 52 aa13.53□□□□□ -0.24
CDC42SE2-206ENST00000503291 C20orf202A1L168 122 aa13.52□□□□□ -0.24
CDC42SE2-206ENST00000503291 IGKCP01834 107 aa13.52□□□□□ -0.24
CDC42SE2-206ENST00000503291 ZNF22P17026 224 aaPredicted RBP13.52□□□□□ -0.24
CDC42SE2-206ENST00000503291 DNAH2Q9P225 4427 aa13.52□□□□□ -0.24
CDC42SE2-206ENST00000503291 A0A087WZ39 114 aa13.52□□□□□ -0.25
CDC42SE2-206ENST00000503291 TMEM170BQ5T4T1 132 aa13.52□□□□□ -0.25
CDC42SE2-206ENST00000503291 MALP21145 153 aa13.5□□□□□ -0.25
CDC42SE2-206ENST00000503291 SCGB1D1O95968 90 aa13.49□□□□□ -0.25
CDC42SE2-206ENST00000503291 RTL8CO15255 209 aa13.48□□□□□ -0.25
CDC42SE2-206ENST00000503291 AKR1D1P51857 326 aa13.48□□□□□ -0.25
CDC42SE2-206ENST00000503291 H3BRM9 83 aa13.47□□□□□ -0.25
CDC42SE2-206ENST00000503291 ATOH7Q8N100 152 aa13.47□□□□□ -0.25
CDC42SE2-206ENST00000503291 LECT2O14960 151 aa13.47□□□□□ -0.25
CDC42SE2-206ENST00000503291 SPINK8P0C7L1 97 aa13.47□□□□□ -0.25
CDC42SE2-206ENST00000503291 JOSD1Q15040 202 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE2-206ENST00000503291 LINC01561Q8N1V8 128 aa13.46□□□□□ -0.25
CDC42SE2-206ENST00000503291 RYR2Q92736 4967 aa13.46□□□□□ -0.25
CDC42SE2-206ENST00000503291 TMEM223A0PJW6 202 aa13.45□□□□□ -0.26
CDC42SE2-206ENST00000503291 LRCOL1A6NCL2 159 aa13.45□□□□□ -0.26
CDC42SE2-206ENST00000503291 SMIM1B2RUZ4 78 aa13.45□□□□□ -0.26
CDC42SE2-206ENST00000503291 USP17L23D6RBM5 183 aa13.45□□□□□ -0.26
CDC42SE2-206ENST00000503291 APOMO95445 188 aa13.45□□□□□ -0.26
CDC42SE2-206ENST00000503291 WFDC2Q14508 124 aa13.45□□□□□ -0.26
CDC42SE2-206ENST00000503291 IGHV1-58A0A0C4DH39 117 aa13.44□□□□□ -0.26
CDC42SE2-206ENST00000503291 LOC105371267A0A1B0GV96 52 aa13.44□□□□□ -0.26
CDC42SE2-206ENST00000503291 CFAP161Q6P656 301 aa13.44□□□□□ -0.26
CDC42SE2-206ENST00000503291 C15orf56Q8N910 161 aa13.44□□□□□ -0.26
CDC42SE2-206ENST00000503291 IGHV3-64A0A075B6Q5 118 aa13.44□□□□□ -0.26
CDC42SE2-206ENST00000503291 STPG4Q8N801 248 aa13.43□□□□□ -0.26
CDC42SE2-206ENST00000503291 PYY3Q5JQD4 70 aa13.42□□□□□ -0.26
CDC42SE2-206ENST00000503291 ORAOV1Q8WV07 137 aa13.42□□□□□ -0.26
CDC42SE2-206ENST00000503291 TNP2Q05952 138 aa13.41□□□□□ -0.26
CDC42SE2-206ENST00000503291 HIGD2BQ4VC39 106 aa13.41□□□□□ -0.26
CDC42SE2-206ENST00000503291 A0A087WTM6 91 aa13.4□□□□□ -0.26
CDC42SE2-206ENST00000503291 IGLV5-39A0A0G2JS06 123 aa13.4□□□□□ -0.26
CDC42SE2-206ENST00000503291 TOMM7Q9P0U1 55 aa13.4□□□□□ -0.26
CDC42SE2-206ENST00000503291 GVQW2A0A096LPI5 108 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE2-206ENST00000503291 hDV102S1A0JD36 115 aa13.39□□□□□ -0.27
CDC42SE2-206ENST00000503291 HERVK_113P61574 105 aa13.39□□□□□ -0.27
CDC42SE2-206ENST00000503291 LINC00526Q96FQ7 95 aa13.39□□□□□ -0.27
CDC42SE2-206ENST00000503291 MAJINQ3KP22 176 aa13.39□□□□□ -0.27
CDC42SE2-206ENST00000503291 DNAH17Q9UFH2 4485 aa13.38□□□□□ -0.27
CDC42SE2-206ENST00000503291 ZNF561-AS1K7EIQ3 104 aa13.38□□□□□ -0.27
CDC42SE2-206ENST00000503291 SPAG11BQ08648 103 aa13.38□□□□□ -0.27
CDC42SE2-206ENST00000503291 KIAA0087Q14695 138 aa13.37□□□□□ -0.27
CDC42SE2-206ENST00000503291 PRSS2P07478 247 aa13.37□□□□□ -0.27
CDC42SE2-206ENST00000503291 COX7B2Q8TF08 81 aa13.37□□□□□ -0.27
CDC42SE2-206ENST00000503291 FRAS1Q86XX4 4008 aa13.37□□□□□ -0.27
CDC42SE2-206ENST00000503291 C14orf177Q52M58 125 aa13.36□□□□□ -0.27
CDC42SE2-206ENST00000503291 C6orf226Q5I0X4 101 aa13.36□□□□□ -0.27
CDC42SE2-206ENST00000503291 Q8IZM0 81 aa13.36□□□□□ -0.27
CDC42SE2-206ENST00000503291 E9PLD3 99 aa13.35□□□□□ -0.27
CDC42SE2-206ENST00000503291 Q8N814 137 aa13.35□□□□□ -0.27
CDC42SE2-206ENST00000503291 RYR3Q15413 4870 aa13.35□□□□□ -0.27
CDC42SE2-206ENST00000503291 HSBP1L1C9JCN9 74 aa13.34□□□□□ -0.27
CDC42SE2-206ENST00000503291 LEPROTO15243 131 aa13.34□□□□□ -0.27
CDC42SE2-206ENST00000503291 ANKRD39Q53RE8 183 aa13.34□□□□□ -0.27
CDC42SE2-206ENST00000503291 NTN5Q8WTR8 489 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE2-206ENST00000503291 LINC00336Q6ZUF6 198 aa13.34□□□□□ -0.27
CDC42SE2-206ENST00000503291 CDPF1Q6NVV7 123 aa13.33□□□□□ -0.28
CDC42SE2-206ENST00000503291 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE2-206ENST00000503291 IGKV2D-26A0A0A0MRZ7 120 aa13.32□□□□□ -0.28
CDC42SE2-206ENST00000503291 EREGO14944 169 aa13.32□□□□□ -0.28
CDC42SE2-206ENST00000503291 C2orf82Q6UX34 121 aa13.32□□□□□ -0.28
CDC42SE2-206ENST00000503291 PLEKHB2Q96CS7 222 aa13.32□□□□□ -0.28
CDC42SE2-206ENST00000503291 SLPIP03973 132 aa13.32□□□□□ -0.28
CDC42SE2-206ENST00000503291 TSPEAR-AS2P59090 65 aa13.32□□□□□ -0.28
CDC42SE2-206ENST00000503291 J3QQQ9 107 aa13.31□□□□□ -0.28
CDC42SE2-206ENST00000503291 CKS1BP61024 79 aa13.31□□□□□ -0.28
CDC42SE2-206ENST00000503291 C2orf48Q96LS8 159 aa13.31□□□□□ -0.28
CDC42SE2-206ENST00000503291 CAMK2N2Q96S95 79 aa13.3□□□□□ -0.28
CDC42SE2-206ENST00000503291 UNQ6190/PRO20217Q6UXQ8 127 aa13.29□□□□□ -0.28
CDC42SE2-206ENST00000503291 VAMP8Q9BV40 100 aa13.29□□□□□ -0.28
CDC42SE2-206ENST00000503291 FAT2Q9NYQ8 4349 aa13.29□□□□□ -0.28
CDC42SE2-206ENST00000503291 LGALS3P17931 250 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms