RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 IGKV1-9A0A0C4DH69 117 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 TRDV1A0A1B0GX56 115 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 ZNF670-ZNF695F2Z2N8 137 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 K7EIL1 84 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 CRYGAP11844 174 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 EDDM3BP56851 147 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 MINOS1Q5TGZ0 78 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 SLC25A26Q70HW3 274 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 C9orf163Q8N9P6 203 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 C5orf17Q8NAS9 161 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 WFDC9Q8NEX5 89 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 OR10AC1Q8NH08 325 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 COPS9Q8WXC6 57 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 ZNF714Q96N38 554 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 SLC25A21Q9BQT8 299 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 SMCO4Q9NRQ5 59 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 AMMECR1Q9Y4X0 333 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 LINC00312Q9Y6C7 94 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 TRBV7-6A0A0J9YX20 115 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 A0A1B0GW64 132 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 LOC107986453A0A1B0GWG9 222 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 TCRBV4S1A1TA0A5B7 111 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 MPC2O95563 127 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 IGLC6P0CF74 106 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 TMBIM6P55061 237 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 S100A10P60903 97 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 CDK5R1Q15078 307 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 PEA15Q15121 130 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 RTL8BQ17RB0 113 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 HEPN1Q6WQI6 88 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 Q8IYB0 196 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 KCNRGQ8N5I3 272 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 BORCS8Q96FH0 119 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 BET1LQ9NYM9 111 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 TRGV10A0A0A0MS01 117 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 ODAMA1E959 279 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 H7BYZ3 331 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 PDCD5O14737 125 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 NFYBP25208 207 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 ZNF93P35789 620 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 DIAPH2-AS1Q14236 149 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 ELOBQ15370 118 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 RRN3P1Q2M238 152 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 VMA21Q3ZAQ7 101 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 DEFB121Q5J5C9 76 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 TMEM244Q5VVB8 128 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 Q5XG85 94 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 MRPL54Q6P161 138 aaKnown RBP2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 TMEM14EPQ6UXP3 125 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 Q6ZQT0 140 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 EXOC3-AS1Q8N2X6 119 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 C10orf126Q8N4M7 172 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 OR5AK2Q8NH90 309 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 LEAP2Q969E1 77 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 RAB37Q96AX2 223 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 LINC00052Q96N35 136 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 HIST1H2BLQ99880 126 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 COMMD3Q9UBI1 195 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 EPDR1Q9UM22 224 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 RYR2Q92736 4967 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 C7orf71A4D174 169 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 OOSP1A8MZH6 123 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 TMEM262E9PQX1 116 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 J3QLW9 94 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 CYB5AP00167 134 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 CTSDP07339 412 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 LINC00694P0DN24 101 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 IFITM1P13164 125 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 SNCAP37840 140 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 SNRPGP62308 76 aaKnown RBP2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 QRFPP83859 136 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 HMGN3Q15651 99 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 PIGYQ3MUY2 71 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 MEIG1Q5JSS6 88 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 XAF1Q6GPH4 301 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 HRCT1Q6UXD1 115 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q6ZRN7 208 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 COA5Q86WW8 74 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 ATOH7Q8N100 152 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 C5orf56Q8N8D9 126 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 OR5D14Q8NGL3 314 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 AQP10Q96PS8 301 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 NAA60Q9H7X0 242 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 LOC100130705A0A1B0GUX0 176 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF736B4DX44 427 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 APOC3P02656 99 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 SPINK8P0C7L1 97 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 IGLC1P0CG04 106 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 SDC2P34741 201 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 DEFB136Q30KP8 78 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 FAM74A1Q5RGS3 127 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms