RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 FAM223BA6NKX1 122 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 ODF3BA8MYP8 253 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 H3BMG7 143 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 H3BQ15 152 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 H3BQ85 93 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 H3BT86 120 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 NDUFA3O95167 84 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 TCRAP04437 139 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 RNASE2P10153 161 aaKnown RBP2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 MDKP21741 143 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 DSCR10P59022 87 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 NDPQ00604 133 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 Q56UQ5 140 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 HCP5Q6MZN7 132 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 UNQ5815/PRO19632Q6UWF5 114 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 Q6ZR54 194 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 FAM223AQ8IWN6 122 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 LINC00612Q8N6U2 182 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 C1orf64Q8NEQ6 169 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 SCGB3A1Q96QR1 104 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 CST9LQ9H4G1 147 aa2.73□□□□□ -1.97
HMGB1P21-201ENST00000502313 WNK2Q9Y3S1 2297 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 DOCK11Q5JSL3 2073 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 IGHV3-73A0A0B4J1V6 119 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 C7orf77A4D0Y5 90 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 C3orf84H3BNL1 204 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 HIST1H2BKO60814 126 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 NPYP01303 97 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 HIST1H2BJP06899 126 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 GCHFRP30047 84 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 WT1-ASQ06250 92 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 SPINK9Q5DT21 86 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 PHF5AQ7RTV0 110 aaKnown RBP2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 SMCR5Q8TEV8 140 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 SMIM7Q9BQ49 75 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 MIEN1Q9BRT3 115 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 TMEM14CQ9P0S9 112 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 RABAC1Q9UI14 185 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 ZFP30Q9Y2G7 519 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 SOX21Q9Y651 276 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 TANC2Q9HCD6 1990 aa2.72□□□□□ -1.97
HMGB1P21-201ENST00000502313 HUWE1Q7Z6Z7 4374 aaKnown RBP2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 TGP01266 2768 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 IGLC7A0M8Q6 106 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 GRIFINA4D1Z8 144 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 MT-ND6P03923 174 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 IGLV7-43P04211 117 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 RPL28P46779 137 aaKnown RBP2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 XCL1P47992 114 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 GNG4P50150 75 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 FOXA3P55318 350 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 UBE2G1P62253 170 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 PDE6HQ13956 83 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 MIAQ16674 131 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 KLK9Q2XQG4 91 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 MIC13Q5XKP0 118 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 MUC7Q8TAX7 377 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 LINC00052Q96N35 136 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 MGST2Q99735 147 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 KLK9Q9UKQ9 250 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 TP53TG3Q9ULZ0 132 aa2.71□□□□□ -1.98
HMGB1P21-201ENST00000502313 ARHGAP32A7KAX9 2087 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 WNK1Q9H4A3 2382 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 KMT2CQ8NEZ4 4911 aaKnown RBP2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 TRBV27A0A0K0K1C4 114 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 I3L2K1 104 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 NCR2O95944 276 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 SLC25A5P05141 298 aaKnown RBP2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 ARL14EPLP0DKL9 152 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 Q6ZQT7 251 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 C7orf65Q6ZTY9 151 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 BAGE2Q86Y30 109 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 Q8N6K4 173 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 C3orf56Q8N813 242 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 PRELID3AQ96N28 172 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 DNAH7Q8WXX0 4024 aa2.7□□□□□ -1.98
HMGB1P21-201ENST00000502313 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 OR2T8A6NH00 312 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 A8MWV9 139 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 C16orf90A8MZG2 172 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 H3BUX3 64 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 NDUFA4O00483 81 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 IL4P05112 153 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 CTSGP08311 255 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 CD24P25063 80 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 SNRPD3P62318 126 aaKnown RBP2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 UBE2L3P68036 154 aaKnown RBP2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 ZNF90Q03938 601 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 ADIRFQ15847 76 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 C5orf17Q8NAS9 161 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 SLC50A1Q9BRV3 221 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 SMAD5-AS1Q9Y6J3 95 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 DNAH1Q9P2D7 4330 aa2.69□□□□□ -1.98
HMGB1P21-201ENST00000502313 IGLV4-69A0A075B6H9 119 aa2.68□□□□□ -1.98
HMGB1P21-201ENST00000502313 TRBV6-1A0A0K0K1D8 114 aa2.68□□□□□ -1.98
HMGB1P21-201ENST00000502313 E7EUB6 86 aa2.68□□□□□ -1.98
HMGB1P21-201ENST00000502313 F2Z2F3 143 aa2.68□□□□□ -1.98
HMGB1P21-201ENST00000502313 CCDC179H3BU77 68 aa2.68□□□□□ -1.98
HMGB1P21-201ENST00000502313 K7EIM0 57 aa2.68□□□□□ -1.98
HMGB1P21-201ENST00000502313 IGLC1P0CG04 106 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms