RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 UNQ6190/PRO20217Q6UXQ8 127 aa8.28□□□□□ -1.08
CCDC58-207ENST00000498466 KIR2DL4Q99706 377 aa8.28□□□□□ -1.08
CCDC58-207ENST00000498466 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
CCDC58-207ENST00000498466 C6orf48Q9UBA6 75 aa8.28□□□□□ -1.08
CCDC58-207ENST00000498466 SMKR1H3BMG3 65 aa8.27□□□□□ -1.09
CCDC58-207ENST00000498466 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
CCDC58-207ENST00000498466 AMN1Q8IY45 258 aa8.27□□□□□ -1.09
CCDC58-207ENST00000498466 SMDT1Q9H4I9 107 aa8.27□□□□□ -1.09
CCDC58-207ENST00000498466 A0A1B0GUT8 65 aa8.26□□□□□ -1.09
CCDC58-207ENST00000498466 TAGLN2P37802 199 aaKnown RBP8.26□□□□□ -1.09
CCDC58-207ENST00000498466 FAM231DQ6ZW35 169 aa8.26□□□□□ -1.09
CCDC58-207ENST00000498466 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
CCDC58-207ENST00000498466 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
CCDC58-207ENST00000498466 RGS21Q2M5E4 152 aa8.25□□□□□ -1.09
CCDC58-207ENST00000498466 CT83Q5H943 113 aa8.25□□□□□ -1.09
CCDC58-207ENST00000498466 TIMM21Q9BVV7 248 aa8.25□□□□□ -1.09
CCDC58-207ENST00000498466 IGHV3OR16-9A0A0B4J2B5 98 aa8.24□□□□□ -1.09
CCDC58-207ENST00000498466 HIGD1CA8MV81 97 aa8.24□□□□□ -1.09
CCDC58-207ENST00000498466 ZNF861PO60384 105 aa8.24□□□□□ -1.09
CCDC58-207ENST00000498466 PPP1R17O96001 155 aa8.24□□□□□ -1.09
CCDC58-207ENST00000498466 NRACQ8N912 160 aa8.23□□□□□ -1.09
CCDC58-207ENST00000498466 MRPL18Q9H0U6 180 aaKnown RBP8.23□□□□□ -1.09
CCDC58-207ENST00000498466 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
CCDC58-207ENST00000498466 RPL39P62891 51 aaKnown RBP8.22□□□□□ -1.09
CCDC58-207ENST00000498466 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
CCDC58-207ENST00000498466 IFITM10A6NMD0 228 aa8.21□□□□□ -1.1
CCDC58-207ENST00000498466 NDUFC2-KCTD14E9PQ53 114 aa8.21□□□□□ -1.1
CCDC58-207ENST00000498466 C9orf129Q5T035 196 aaKnown RBP8.21□□□□□ -1.1
CCDC58-207ENST00000498466 TYMSOSQ8TAI1 123 aa8.21□□□□□ -1.1
CCDC58-207ENST00000498466 A0A087X002 238 aa8.2□□□□□ -1.1
CCDC58-207ENST00000498466 CEBPGP53567 150 aa8.2□□□□□ -1.1
CCDC58-207ENST00000498466 HBBP68871 147 aa8.2□□□□□ -1.1
CCDC58-207ENST00000498466 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 TMEM250H0YL14 139 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 NUPR1O60356 82 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 RIGQ13278 110 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 KIAA0087Q14695 138 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
CCDC58-207ENST00000498466 BATF3Q9NR55 127 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
CCDC58-207ENST00000498466 CRYGAP11844 174 aa8.18□□□□□ -1.1
CCDC58-207ENST00000498466 CTDSP1Q9GZU7 261 aa8.18□□□□□ -1.1
CCDC58-207ENST00000498466 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
CCDC58-207ENST00000498466 TCAPO15273 167 aa8.17□□□□□ -1.1
CCDC58-207ENST00000498466 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
CCDC58-207ENST00000498466 MRPL51Q4U2R6 128 aaKnown RBP8.17□□□□□ -1.1
CCDC58-207ENST00000498466 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
CCDC58-207ENST00000498466 C20orf78Q9BR46 151 aa8.17□□□□□ -1.1
CCDC58-207ENST00000498466 C22orf24Q9Y442 160 aa8.17□□□□□ -1.1
CCDC58-207ENST00000498466 LINC01551Q86U37 167 aa8.16□□□□□ -1.1
CCDC58-207ENST00000498466 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
CCDC58-207ENST00000498466 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
CCDC58-207ENST00000498466 LCE3BQ5TA77 95 aa8.15□□□□□ -1.1
CCDC58-207ENST00000498466 FAM104BQ5XKR9 115 aa8.15□□□□□ -1.1
CCDC58-207ENST00000498466 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
CCDC58-207ENST00000498466 LINC00469Q8N7U9 141 aa8.15□□□□□ -1.1
CCDC58-207ENST00000498466 OSTCQ9NRP0 149 aa8.15□□□□□ -1.1
CCDC58-207ENST00000498466 TRBV24-1A0A075B6N3 115 aa8.14□□□□□ -1.11
CCDC58-207ENST00000498466 LINC00862A6NCI5 91 aa8.14□□□□□ -1.11
CCDC58-207ENST00000498466 CKS2P33552 79 aa8.14□□□□□ -1.11
CCDC58-207ENST00000498466 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
CCDC58-207ENST00000498466 SMIM7Q9BQ49 75 aa8.14□□□□□ -1.11
CCDC58-207ENST00000498466 ZNF727A8MUV8 499 aa8.13□□□□□ -1.11
CCDC58-207ENST00000498466 TNFRSF6BO95407 300 aa8.13□□□□□ -1.11
CCDC58-207ENST00000498466 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
CCDC58-207ENST00000498466 SMIM2Q9BVW6 85 aa8.13□□□□□ -1.11
CCDC58-207ENST00000498466 ANAPC11Q9NYG5 84 aa8.13□□□□□ -1.11
CCDC58-207ENST00000498466 BCE1O60756 84 aa8.12□□□□□ -1.11
CCDC58-207ENST00000498466 IFI27P40305 119 aaPredicted RBP8.12□□□□□ -1.11
CCDC58-207ENST00000498466 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
CCDC58-207ENST00000498466 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
CCDC58-207ENST00000498466 NAT8BQ9UHF3 227 aa8.12□□□□□ -1.11
CCDC58-207ENST00000498466 V9GYV3 84 aa8.12□□□□□ -1.11
CCDC58-207ENST00000498466 PRSS2P07478 247 aa8.11□□□□□ -1.11
CCDC58-207ENST00000498466 CKS1BP61024 79 aa8.11□□□□□ -1.11
CCDC58-207ENST00000498466 KRTAP4-12Q9BQ66 201 aa8.11□□□□□ -1.11
CCDC58-207ENST00000498466 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
CCDC58-207ENST00000498466 KRTAP13-2Q52LG2 175 aa8.1□□□□□ -1.11
CCDC58-207ENST00000498466 LINC00173Q6ZV60 143 aa8.1□□□□□ -1.11
CCDC58-207ENST00000498466 MRPL55Q7Z7F7 128 aaKnown RBP8.1□□□□□ -1.11
CCDC58-207ENST00000498466 LINC00304Q8N9R0 145 aa8.1□□□□□ -1.11
CCDC58-207ENST00000498466 TOMM7Q9P0U1 55 aa8.1□□□□□ -1.11
CCDC58-207ENST00000498466 IGLV4-3A0A075B6K6 122 aa8.09□□□□□ -1.11
CCDC58-207ENST00000498466 D6R8Y8 96 aa8.09□□□□□ -1.11
CCDC58-207ENST00000498466 BLOC1S1P78537 153 aa8.09□□□□□ -1.11
CCDC58-207ENST00000498466 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
CCDC58-207ENST00000498466 EIF5A2Q9GZV4 153 aaKnown RBP8.09□□□□□ -1.11
CCDC58-207ENST00000498466 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
CCDC58-207ENST00000498466 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
CCDC58-207ENST00000498466 NPYP01303 97 aa8.08□□□□□ -1.12
CCDC58-207ENST00000498466 RAB5AP20339 215 aa8.08□□□□□ -1.12
CCDC58-207ENST00000498466 C6orf226Q5I0X4 101 aa8.08□□□□□ -1.12
CCDC58-207ENST00000498466 TEX43Q6ZNM6 134 aa8.08□□□□□ -1.12
CCDC58-207ENST00000498466 TMEM141Q96I45 108 aa8.08□□□□□ -1.12
CCDC58-207ENST00000498466 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
CCDC58-207ENST00000498466 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
CCDC58-207ENST00000498466 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms