RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 MAP1LC3B2A6NCE7 125 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 SSNA1O43805 119 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 TLX1NBP0CAT3 122 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 CTAG1AP78358 180 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 ASB16-AS1Q495Z4 193 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 ZC2HC1BQ5TFG8 222 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 MRPL52Q86TS9 123 aaKnown RBP4.36□□□□□ -1.71
VPS45-210ENST00000497638 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 OR10D4PQ8NGN7 298 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 MRAP2Q96G30 205 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 MAP1LC3BQ9GZQ8 125 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 CDC42SE2Q9NRR3 84 aa4.36□□□□□ -1.71
VPS45-210ENST00000497638 XKRY2A2RUG3 117 aa4.35□□□□□ -1.71
VPS45-210ENST00000497638 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
VPS45-210ENST00000497638 INMT-MINDY4F8WBC2 141 aa4.35□□□□□ -1.71
VPS45-210ENST00000497638 NUPR1O60356 82 aa4.35□□□□□ -1.71
VPS45-210ENST00000497638 AKR1C8PQ5T2L2 129 aa4.35□□□□□ -1.71
VPS45-210ENST00000497638 LINC00304Q8N9R0 145 aa4.35□□□□□ -1.71
VPS45-210ENST00000497638 FAM210AQ96ND0 272 aa4.35□□□□□ -1.71
VPS45-210ENST00000497638 BORCS7-ASMTA0A0B4J1R7 106 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 I3L3M4 83 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 NDUFA1O15239 70 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 PAGE4O60829 102 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 PFDN1O60925 122 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 TMEM241Q24JQ0 296 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 TEX261Q6UWH6 196 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 RPL39LQ96EH5 51 aaKnown RBP4.34□□□□□ -1.71
VPS45-210ENST00000497638 PPDPFQ9H3Y8 114 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 SMDT1Q9H4I9 107 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 ALG5Q9Y673 324 aa4.34□□□□□ -1.71
VPS45-210ENST00000497638 TSHBP01222 138 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 IFNA1P01562 189 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 PMCHP20382 165 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 CTRLP40313 264 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 RPL28P46779 137 aaKnown RBP4.33□□□□□ -1.72
VPS45-210ENST00000497638 GAGE2EQ4V326 116 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 LYZL1Q6UWQ5 148 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 C5orf38Q86SI9 138 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 GAGE2DQ9UEU5 116 aa4.33□□□□□ -1.72
VPS45-210ENST00000497638 TRBV6-5A0A0K0K1A5 114 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 C7orf77A4D0Y5 90 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 RPL7L1Q6DKI1 246 aaKnown RBP4.32□□□□□ -1.72
VPS45-210ENST00000497638 C9orf62Q8N4C0 152 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 LINC00337Q8N6G1 96 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 ORAOV1Q8WV07 137 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 MARVELD1Q9BSK0 173 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 CNFNQ9BYD5 112 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 TMEM242Q9NWH2 141 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 C6orf48Q9UBA6 75 aa4.32□□□□□ -1.72
VPS45-210ENST00000497638 TRAV13-1A0A0B4J241 112 aa4.31□□□□□ -1.72
VPS45-210ENST00000497638 RPL35P42766 123 aaKnown RBP4.31□□□□□ -1.72
VPS45-210ENST00000497638 DEFA1P59665 94 aa4.31□□□□□ -1.72
VPS45-210ENST00000497638 FAM229BQ4G0N7 80 aa4.31□□□□□ -1.72
VPS45-210ENST00000497638 KRTAP13-2Q52LG2 175 aa4.31□□□□□ -1.72
VPS45-210ENST00000497638 TMUB2Q71RG4 321 aa4.31□□□□□ -1.72
VPS45-210ENST00000497638 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
VPS45-210ENST00000497638 SMIM15Q7Z3B0 74 aa4.31□□□□□ -1.72
VPS45-210ENST00000497638 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
VPS45-210ENST00000497638 SMIM1B2RUZ4 78 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 NDUFC2-KCTD14E9PQ53 114 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 BCE1O60756 84 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 LBHQ53QV2 105 aaPredicted RBP4.3□□□□□ -1.72
VPS45-210ENST00000497638 CENPWQ5EE01 88 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 LINC00242Q5T6M2 205 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 UNQ6190/PRO20217Q6UXQ8 127 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 SMIM12Q96EX1 92 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 CYTL1Q9NRR1 136 aa4.3□□□□□ -1.72
VPS45-210ENST00000497638 TRBV30A0A0K0K1B3 111 aa4.29□□□□□ -1.72
VPS45-210ENST00000497638 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
VPS45-210ENST00000497638 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
VPS45-210ENST00000497638 C11orf52Q96A22 123 aa4.29□□□□□ -1.72
VPS45-210ENST00000497638 ST20Q9HBF5 79 aa4.29□□□□□ -1.72
VPS45-210ENST00000497638 IGKV2D-26A0A0A0MRZ7 120 aa4.28□□□□□ -1.72
VPS45-210ENST00000497638 TRBV27A0A0K0K1C4 114 aa4.28□□□□□ -1.72
VPS45-210ENST00000497638 MT1HP80294 61 aa4.28□□□□□ -1.72
VPS45-210ENST00000497638 RNASE13Q5GAN3 156 aaKnown RBP4.28□□□□□ -1.72
VPS45-210ENST00000497638 RNASE7Q9H1E1 156 aaKnown RBP4.28□□□□□ -1.72
VPS45-210ENST00000497638 BIN3Q9NQY0 253 aa4.28□□□□□ -1.72
VPS45-210ENST00000497638 ANAPC11Q9NYG5 84 aa4.28□□□□□ -1.72
VPS45-210ENST00000497638 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
VPS45-210ENST00000497638 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 IGHV3OR16-9A0A0B4J2B5 98 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 RAB19A4D1S5 217 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 UPK1BO75841 260 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 FCER1GP30273 86 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 GNG4P50150 75 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 POLR2KP53803 58 aaKnown RBP4.27□□□□□ -1.73
VPS45-210ENST00000497638 LINC00299Q6ZSB3 139 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 Q6ZUT4 128 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 KCNRGQ8N5I3 272 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 SFT2D1Q8WV19 159 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 S100ZQ8WXG8 99 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 PACRGQ96M98 296 aaPredicted RBP4.27□□□□□ -1.73
VPS45-210ENST00000497638 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 C22orf24Q9Y442 160 aa4.27□□□□□ -1.73
VPS45-210ENST00000497638 A0A1B0GV50 99 aa4.26□□□□□ -1.73
VPS45-210ENST00000497638 FOXA3P55318 350 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms