RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 A0A087WYN8 130 aa9.58□□□□□ -0.88
NEK4-206ENST00000496822 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
NEK4-206ENST00000496822 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
NEK4-206ENST00000496822 XCL1P47992 114 aa9.58□□□□□ -0.88
NEK4-206ENST00000496822 CFAP161Q6P656 301 aa9.58□□□□□ -0.88
NEK4-206ENST00000496822 BAGE3Q86Y29 109 aa9.58□□□□□ -0.88
NEK4-206ENST00000496822 CCL25O15444 150 aa9.57□□□□□ -0.88
NEK4-206ENST00000496822 TMEM101Q96IK0 257 aa9.57□□□□□ -0.88
NEK4-206ENST00000496822 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
NEK4-206ENST00000496822 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
NEK4-206ENST00000496822 OXTP01178 125 aa9.56□□□□□ -0.88
NEK4-206ENST00000496822 LINC00614P0C842 121 aa9.56□□□□□ -0.88
NEK4-206ENST00000496822 COX6A2Q02221 97 aa9.56□□□□□ -0.88
NEK4-206ENST00000496822 MRPL52Q86TS9 123 aaKnown RBP9.56□□□□□ -0.88
NEK4-206ENST00000496822 CHCHD1Q96BP2 118 aaKnown RBP9.56□□□□□ -0.88
NEK4-206ENST00000496822 DPH3Q96FX2 82 aa9.55□□□□□ -0.88
NEK4-206ENST00000496822 CDC42SE2Q9NRR3 84 aa9.55□□□□□ -0.88
NEK4-206ENST00000496822 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BKO60814 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BJP06899 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BOP23527 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BBP33778 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BDP58876 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BCP62807 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST2H2BEQ16778 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BHQ93079 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 LINC00526Q96FQ7 95 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BNQ99877 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 HIST1H2BMQ99879 126 aa9.54□□□□□ -0.88
NEK4-206ENST00000496822 IGKV2-24A0A0C4DH68 120 aa9.53□□□□□ -0.88
NEK4-206ENST00000496822 LINC01546A6NGU7 62 aa9.53□□□□□ -0.88
NEK4-206ENST00000496822 HSBP1O75506 76 aa9.53□□□□□ -0.88
NEK4-206ENST00000496822 CYSLTR1Q9Y271 337 aa9.53□□□□□ -0.88
NEK4-206ENST00000496822 A0A096LNI7 61 aa9.52□□□□□ -0.89
NEK4-206ENST00000496822 MAJINQ3KP22 176 aa9.52□□□□□ -0.89
NEK4-206ENST00000496822 RNASE13Q5GAN3 156 aaKnown RBP9.52□□□□□ -0.89
NEK4-206ENST00000496822 ZNF664Q8N3J9 261 aa9.52□□□□□ -0.89
NEK4-206ENST00000496822 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
NEK4-206ENST00000496822 SS18Q15532 418 aa9.51□□□□□ -0.89
NEK4-206ENST00000496822 UBE2D4Q9Y2X8 147 aa9.51□□□□□ -0.89
NEK4-206ENST00000496822 HBDP02042 147 aa9.5□□□□□ -0.89
NEK4-206ENST00000496822 CD164L2Q6UWJ8 174 aa9.5□□□□□ -0.89
NEK4-206ENST00000496822 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
NEK4-206ENST00000496822 Q6ZUT4 128 aa9.5□□□□□ -0.89
NEK4-206ENST00000496822 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
NEK4-206ENST00000496822 SPANXA1Q9NS26 97 aa9.5□□□□□ -0.89
NEK4-206ENST00000496822 SERF1AO75920 110 aa9.49□□□□□ -0.89
NEK4-206ENST00000496822 S100A6P06703 90 aa9.49□□□□□ -0.89
NEK4-206ENST00000496822 STPG4Q8N801 248 aa9.49□□□□□ -0.89
NEK4-206ENST00000496822 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
NEK4-206ENST00000496822 NPSP0C0P6 89 aa9.48□□□□□ -0.89
NEK4-206ENST00000496822 MT1HL1P0DM35 61 aa9.48□□□□□ -0.89
NEK4-206ENST00000496822 NDUFA6P56556 154 aa9.48□□□□□ -0.89
NEK4-206ENST00000496822 PAPPA-AS1Q5QFB9 102 aa9.48□□□□□ -0.89
NEK4-206ENST00000496822 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
NEK4-206ENST00000496822 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
NEK4-206ENST00000496822 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
NEK4-206ENST00000496822 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
NEK4-206ENST00000496822 COA6Q5JTJ3 125 aaKnown RBP9.47□□□□□ -0.89
NEK4-206ENST00000496822 Q6ZN92 141 aa9.47□□□□□ -0.89
NEK4-206ENST00000496822 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
NEK4-206ENST00000496822 PYGO1Q9Y3Y4 419 aa9.47□□□□□ -0.89
NEK4-206ENST00000496822 TRAV13-1A0A0B4J241 112 aa9.46□□□□□ -0.9
NEK4-206ENST00000496822 SERTAD4-AS1Q5TG53 156 aa9.46□□□□□ -0.9
NEK4-206ENST00000496822 Q6ZRU5 148 aa9.46□□□□□ -0.9
NEK4-206ENST00000496822 ERASQ7Z444 233 aa9.46□□□□□ -0.9
NEK4-206ENST00000496822 TMEM141Q96I45 108 aa9.46□□□□□ -0.9
NEK4-206ENST00000496822 SCGB3A1Q96QR1 104 aa9.46□□□□□ -0.9
NEK4-206ENST00000496822 IGLV4-69A0A075B6H9 119 aa9.45□□□□□ -0.9
NEK4-206ENST00000496822 ZNF561-AS1K7EIQ3 104 aa9.45□□□□□ -0.9
NEK4-206ENST00000496822 COX7A2LO14548 114 aa9.45□□□□□ -0.9
NEK4-206ENST00000496822 ATP5LO75964 103 aa9.45□□□□□ -0.9
NEK4-206ENST00000496822 PRR3P79522 188 aaKnown RBP9.45□□□□□ -0.9
NEK4-206ENST00000496822 MRPS36P82909 103 aaKnown RBP9.45□□□□□ -0.9
NEK4-206ENST00000496822 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
NEK4-206ENST00000496822 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
NEK4-206ENST00000496822 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
NEK4-206ENST00000496822 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
NEK4-206ENST00000496822 MALP21145 153 aa9.44□□□□□ -0.9
NEK4-206ENST00000496822 PMCHL1Q16048 86 aa9.44□□□□□ -0.9
NEK4-206ENST00000496822 LINC00310P59036 64 aa9.43□□□□□ -0.9
NEK4-206ENST00000496822 C5orf38Q86SI9 138 aa9.43□□□□□ -0.9
NEK4-206ENST00000496822 PACRGQ96M98 296 aaPredicted RBP9.43□□□□□ -0.9
NEK4-206ENST00000496822 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
NEK4-206ENST00000496822 HSPB8Q9UJY1 196 aa9.43□□□□□ -0.9
NEK4-206ENST00000496822 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 PDZD11Q5EBL8 140 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 FAM19A2Q8N3H0 131 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 OPRPNQ99935 248 aaPredicted RBP9.42□□□□□ -0.9
NEK4-206ENST00000496822 VCX2Q9H322 139 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 TNXBP22105 4242 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
NEK4-206ENST00000496822 A0A096LNJ9 63 aa9.41□□□□□ -0.9
NEK4-206ENST00000496822 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
NEK4-206ENST00000496822 S100A2P29034 98 aa9.41□□□□□ -0.9
NEK4-206ENST00000496822 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
NEK4-206ENST00000496822 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms