RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
PTPRF-214ENST00000496043 MT-ND4LP03901 98 aa7.96□□□□□ -1.14
PTPRF-214ENST00000496043 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
PTPRF-214ENST00000496043 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
PTPRF-214ENST00000496043 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
PTPRF-214ENST00000496043 RNF151Q2KHN1 245 aa7.96□□□□□ -1.14
PTPRF-214ENST00000496043 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
PTPRF-214ENST00000496043 FAM104AQ969W3 186 aa7.96□□□□□ -1.14
PTPRF-214ENST00000496043 PLA2G2DQ9UNK4 145 aa7.96□□□□□ -1.14
PTPRF-214ENST00000496043 IGHV3OR16-9A0A0B4J2B5 98 aa7.95□□□□□ -1.14
PTPRF-214ENST00000496043 PRSS47A8MTI9 375 aa7.95□□□□□ -1.14
PTPRF-214ENST00000496043 F8WDY8 70 aa7.95□□□□□ -1.14
PTPRF-214ENST00000496043 SPAG11BQ08648 103 aa7.95□□□□□ -1.14
PTPRF-214ENST00000496043 IFITM10A6NMD0 228 aa7.94□□□□□ -1.14
PTPRF-214ENST00000496043 ADCYAP1P18509 176 aa7.94□□□□□ -1.14
PTPRF-214ENST00000496043 IFI27P40305 119 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-214ENST00000496043 Q6ZRP5 223 aa7.94□□□□□ -1.14
PTPRF-214ENST00000496043 ORAOV1Q8WV07 137 aa7.94□□□□□ -1.14
PTPRF-214ENST00000496043 LAMTOR2Q9Y2Q5 125 aa7.94□□□□□ -1.14
PTPRF-214ENST00000496043 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
PTPRF-214ENST00000496043 LOC389332A0A1B0GUA5 103 aa7.93□□□□□ -1.14
PTPRF-214ENST00000496043 A0A1W2PNN7 141 aa7.93□□□□□ -1.14
PTPRF-214ENST00000496043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.93□□□□□ -1.14
PTPRF-214ENST00000496043 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
PTPRF-214ENST00000496043 SPINK6Q6UWN8 80 aa7.93□□□□□ -1.14
PTPRF-214ENST00000496043 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
PTPRF-214ENST00000496043 TGIF2-C20orf24A0A0A6YYL0 155 aa7.92□□□□□ -1.14
PTPRF-214ENST00000496043 A0A0J9YXV3 536 aa7.92□□□□□ -1.14
PTPRF-214ENST00000496043 TMEM218A2RU14 115 aa7.92□□□□□ -1.14
PTPRF-214ENST00000496043 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
PTPRF-214ENST00000496043 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
PTPRF-214ENST00000496043 LINC01600Q96MT4 127 aa7.92□□□□□ -1.14
PTPRF-214ENST00000496043 IMMP2LQ96T52 175 aa7.92□□□□□ -1.14
PTPRF-214ENST00000496043 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
PTPRF-214ENST00000496043 NDUFA1O15239 70 aa7.91□□□□□ -1.14
PTPRF-214ENST00000496043 SRSF9Q13242 221 aaKnown RBP eCLIP7.91□□□□□ -1.14
PTPRF-214ENST00000496043 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
PTPRF-214ENST00000496043 Q8N8P6 123 aa7.91□□□□□ -1.14
PTPRF-214ENST00000496043 TMEM141Q96I45 108 aa7.91□□□□□ -1.14
PTPRF-214ENST00000496043 IGLV4-3A0A075B6K6 122 aa7.9□□□□□ -1.14
PTPRF-214ENST00000496043 A0A087WZ39 114 aa7.9□□□□□ -1.14
PTPRF-214ENST00000496043 REG3GQ6UW15 175 aa7.9□□□□□ -1.14
PTPRF-214ENST00000496043 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
PTPRF-214ENST00000496043 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.14
PTPRF-214ENST00000496043 ORMDL2Q53FV1 153 aa7.89□□□□□ -1.15
PTPRF-214ENST00000496043 LINC00242Q5T6M2 205 aa7.89□□□□□ -1.15
PTPRF-214ENST00000496043 TEX43Q6ZNM6 134 aa7.89□□□□□ -1.15
PTPRF-214ENST00000496043 CYSLTR1Q9Y271 337 aa7.89□□□□□ -1.15
PTPRF-214ENST00000496043 K7EMI3 77 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 MT-ND6P03923 174 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 C10orf25Q5T742 122 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 C2orf66Q6UXQ4 117 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 Q6ZN92 141 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 C2orf88Q9BSF0 95 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 CTDSP1Q9GZU7 261 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 VCX2Q9H322 139 aa7.88□□□□□ -1.15
PTPRF-214ENST00000496043 NPSP0C0P6 89 aa7.87□□□□□ -1.15
PTPRF-214ENST00000496043 TLX1NBP0CAT3 122 aa7.87□□□□□ -1.15
PTPRF-214ENST00000496043 G0S2P27469 103 aa7.87□□□□□ -1.15
PTPRF-214ENST00000496043 UBE2D1P51668 147 aa7.87□□□□□ -1.15
PTPRF-214ENST00000496043 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
PTPRF-214ENST00000496043 PHF5AQ7RTV0 110 aaKnown RBP7.87□□□□□ -1.15
PTPRF-214ENST00000496043 LINC01561Q8N1V8 128 aa7.87□□□□□ -1.15
PTPRF-214ENST00000496043 SEC11CQ9BY50 192 aa7.87□□□□□ -1.15
PTPRF-214ENST00000496043 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
PTPRF-214ENST00000496043 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
PTPRF-214ENST00000496043 C10orf91Q5T1B1 145 aa7.86□□□□□ -1.15
PTPRF-214ENST00000496043 AMELXQ99217 191 aa7.86□□□□□ -1.15
PTPRF-214ENST00000496043 C6orf48Q9UBA6 75 aa7.86□□□□□ -1.15
PTPRF-214ENST00000496043 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
PTPRF-214ENST00000496043 CARHSP1Q9Y2V2 147 aaKnown RBP7.86□□□□□ -1.15
PTPRF-214ENST00000496043 GAGE2EQ4V326 116 aa7.85□□□□□ -1.15
PTPRF-214ENST00000496043 ZC2HC1BQ5TFG8 222 aa7.85□□□□□ -1.15
PTPRF-214ENST00000496043 GAGE2DQ9UEU5 116 aa7.85□□□□□ -1.15
PTPRF-214ENST00000496043 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
PTPRF-214ENST00000496043 IGIPA6NJ69 53 aa7.84□□□□□ -1.15
PTPRF-214ENST00000496043 C1orf137Q5JT78 98 aa7.84□□□□□ -1.15
PTPRF-214ENST00000496043 PAPPA-AS1Q5QFB9 102 aa7.84□□□□□ -1.15
PTPRF-214ENST00000496043 PACRGQ96M98 296 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-214ENST00000496043 PRSS2P07478 247 aa7.83□□□□□ -1.16
PTPRF-214ENST00000496043 SEC11AP67812 179 aa7.83□□□□□ -1.16
PTPRF-214ENST00000496043 NDUFA5Q16718 116 aa7.83□□□□□ -1.16
PTPRF-214ENST00000496043 KIAA1644Q3SXP7 199 aa7.83□□□□□ -1.16
PTPRF-214ENST00000496043 C6orf226Q5I0X4 101 aa7.83□□□□□ -1.16
PTPRF-214ENST00000496043 C2orf82Q6UX34 121 aa7.83□□□□□ -1.16
PTPRF-214ENST00000496043 LINC00173Q6ZV60 143 aa7.83□□□□□ -1.16
PTPRF-214ENST00000496043 TRAV9-1A0A075B6T8 112 aa7.82□□□□□ -1.16
PTPRF-214ENST00000496043 FAM168BA1KXE4 195 aa7.82□□□□□ -1.16
PTPRF-214ENST00000496043 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
PTPRF-214ENST00000496043 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
PTPRF-214ENST00000496043 APOC3P02656 99 aa7.81□□□□□ -1.16
PTPRF-214ENST00000496043 S100PP25815 95 aa7.81□□□□□ -1.16
PTPRF-214ENST00000496043 CKS1BP61024 79 aa7.81□□□□□ -1.16
PTPRF-214ENST00000496043 FAM19A5Q7Z5A7 132 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-214ENST00000496043 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
PTPRF-214ENST00000496043 TIMM17AQ99595 171 aa7.81□□□□□ -1.16
PTPRF-214ENST00000496043 TOMM7Q9P0U1 55 aa7.81□□□□□ -1.16
PTPRF-214ENST00000496043 TNXBP22105 4242 aa7.8□□□□□ -1.16
PTPRF-214ENST00000496043 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
PTPRF-214ENST00000496043 HERVK_113P63121 156 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms