RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SLC51BQ86UW2 128 aa8.53□□□□□ -1.04
VARS-228ENST00000495010 SMDT1Q9H4I9 107 aa8.53□□□□□ -1.04
VARS-228ENST00000495010 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
VARS-228ENST00000495010 TCAPO15273 167 aa8.52□□□□□ -1.05
VARS-228ENST00000495010 TSPAN13O95857 204 aa8.52□□□□□ -1.05
VARS-228ENST00000495010 NRACQ8N912 160 aa8.52□□□□□ -1.05
VARS-228ENST00000495010 TGIF2-C20orf24A0A0A6YYL0 155 aa8.51□□□□□ -1.05
VARS-228ENST00000495010 IGHV3OR16-9A0A0B4J2B5 98 aa8.51□□□□□ -1.05
VARS-228ENST00000495010 IFITM10A6NMD0 228 aa8.51□□□□□ -1.05
VARS-228ENST00000495010 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
VARS-228ENST00000495010 HBBP68871 147 aa8.5□□□□□ -1.05
VARS-228ENST00000495010 SMIM7Q9BQ49 75 aa8.5□□□□□ -1.05
VARS-228ENST00000495010 OSTCQ9NRP0 149 aa8.5□□□□□ -1.05
VARS-228ENST00000495010 SPANXA1Q9NS26 97 aa8.5□□□□□ -1.05
VARS-228ENST00000495010 BLOC1S1P78537 153 aa8.49□□□□□ -1.05
VARS-228ENST00000495010 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
VARS-228ENST00000495010 PACRGQ96M98 296 aaPredicted RBP8.49□□□□□ -1.05
VARS-228ENST00000495010 C20orf78Q9BR46 151 aa8.49□□□□□ -1.05
VARS-228ENST00000495010 MUC2Q02817 5179 aa8.49□□□□□ -1.05
VARS-228ENST00000495010 TRBV30A0A0K0K1B3 111 aa8.48□□□□□ -1.05
VARS-228ENST00000495010 LINC00862A6NCI5 91 aa8.48□□□□□ -1.05
VARS-228ENST00000495010 ZNF861PO60384 105 aa8.48□□□□□ -1.05
VARS-228ENST00000495010 CKS2P33552 79 aa8.48□□□□□ -1.05
VARS-228ENST00000495010 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
VARS-228ENST00000495010 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
VARS-228ENST00000495010 ZNF727A8MUV8 499 aa8.47□□□□□ -1.05
VARS-228ENST00000495010 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
VARS-228ENST00000495010 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
VARS-228ENST00000495010 FAM104BQ5XKR9 115 aa8.47□□□□□ -1.05
VARS-228ENST00000495010 EIF5A2Q9GZV4 153 aaKnown RBP8.47□□□□□ -1.05
VARS-228ENST00000495010 NAT8BQ9UHF3 227 aa8.47□□□□□ -1.05
VARS-228ENST00000495010 NUPR1O60356 82 aa8.46□□□□□ -1.06
VARS-228ENST00000495010 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
VARS-228ENST00000495010 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
VARS-228ENST00000495010 TNFRSF6BO95407 300 aa8.45□□□□□ -1.06
VARS-228ENST00000495010 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
VARS-228ENST00000495010 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
VARS-228ENST00000495010 C2orf82Q6UX34 121 aa8.45□□□□□ -1.06
VARS-228ENST00000495010 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
VARS-228ENST00000495010 SMIM2Q9BVW6 85 aa8.45□□□□□ -1.06
VARS-228ENST00000495010 V9GYV3 84 aa8.45□□□□□ -1.06
VARS-228ENST00000495010 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
VARS-228ENST00000495010 LBHQ53QV2 105 aaPredicted RBP8.44□□□□□ -1.06
VARS-228ENST00000495010 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
VARS-228ENST00000495010 PRSS2P07478 247 aa8.43□□□□□ -1.06
VARS-228ENST00000495010 ALKAL2Q6UX46 152 aa8.43□□□□□ -1.06
VARS-228ENST00000495010 TCTE3Q8IZS6 198 aa8.43□□□□□ -1.06
VARS-228ENST00000495010 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
VARS-228ENST00000495010 CTDSP1Q9GZU7 261 aa8.43□□□□□ -1.06
VARS-228ENST00000495010 A0A1B0GW15 77 aa8.42□□□□□ -1.06
VARS-228ENST00000495010 CRYGAP11844 174 aa8.42□□□□□ -1.06
VARS-228ENST00000495010 RAB5AP20339 215 aa8.42□□□□□ -1.06
VARS-228ENST00000495010 RPL28P46779 137 aaKnown RBP8.42□□□□□ -1.06
VARS-228ENST00000495010 FAM74A3Q4VXF1 159 aa8.42□□□□□ -1.06
VARS-228ENST00000495010 LINC00242Q5T6M2 205 aa8.42□□□□□ -1.06
VARS-228ENST00000495010 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
VARS-228ENST00000495010 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
VARS-228ENST00000495010 D6R8Y8 96 aa8.41□□□□□ -1.06
VARS-228ENST00000495010 CKS1BP61024 79 aa8.41□□□□□ -1.06
VARS-228ENST00000495010 F8W036 122 aa8.4□□□□□ -1.06
VARS-228ENST00000495010 S100A8P05109 93 aa8.4□□□□□ -1.06
VARS-228ENST00000495010 LINC00469Q8N7U9 141 aa8.4□□□□□ -1.06
VARS-228ENST00000495010 TOMM7Q9P0U1 55 aa8.4□□□□□ -1.06
VARS-228ENST00000495010 A0A087X002 238 aa8.39□□□□□ -1.07
VARS-228ENST00000495010 C6orf226Q5I0X4 101 aa8.39□□□□□ -1.07
VARS-228ENST00000495010 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
VARS-228ENST00000495010 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
VARS-228ENST00000495010 TMEM141Q96I45 108 aa8.39□□□□□ -1.07
VARS-228ENST00000495010 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
VARS-228ENST00000495010 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
VARS-228ENST00000495010 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
VARS-228ENST00000495010 SMIM27A0A1W2PRY6 76 aa8.38□□□□□ -1.07
VARS-228ENST00000495010 NPYP01303 97 aa8.38□□□□□ -1.07
VARS-228ENST00000495010 PPBPP02775 128 aa8.38□□□□□ -1.07
VARS-228ENST00000495010 SRP19P09132 144 aaKnown RBP8.38□□□□□ -1.07
VARS-228ENST00000495010 ADIRFQ15847 76 aa8.38□□□□□ -1.07
VARS-228ENST00000495010 Q6ZN92 141 aa8.38□□□□□ -1.07
VARS-228ENST00000495010 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
VARS-228ENST00000495010 BCE1O60756 84 aa8.37□□□□□ -1.07
VARS-228ENST00000495010 RPL23P62829 140 aaKnown RBP8.37□□□□□ -1.07
VARS-228ENST00000495010 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
VARS-228ENST00000495010 CDIP1Q9H305 208 aa8.37□□□□□ -1.07
VARS-228ENST00000495010 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
VARS-228ENST00000495010 RETNLBQ9BQ08 111 aa8.36□□□□□ -1.07
VARS-228ENST00000495010 ORMDL3Q8N138 153 aa8.35□□□□□ -1.07
VARS-228ENST00000495010 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
VARS-228ENST00000495010 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
VARS-228ENST00000495010 Q8IZM0 81 aa8.34□□□□□ -1.07
VARS-228ENST00000495010 PRELID3AQ96N28 172 aa8.34□□□□□ -1.07
VARS-228ENST00000495010 VCX2Q9H322 139 aa8.34□□□□□ -1.07
VARS-228ENST00000495010 NAT8Q9UHE5 227 aa8.34□□□□□ -1.07
VARS-228ENST00000495010 TMEM136Q6ZRR5 245 aa8.33□□□□□ -1.08
VARS-228ENST00000495010 ANAPC11Q9NYG5 84 aa8.33□□□□□ -1.08
VARS-228ENST00000495010 RPL37AP8A6NKH3 93 aa8.32□□□□□ -1.08
VARS-228ENST00000495010 UBE2AP49459 152 aa8.32□□□□□ -1.08
VARS-228ENST00000495010 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
VARS-228ENST00000495010 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
VARS-228ENST00000495010 hCG_2014768A0A024R1R8 64 aa8.31□□□□□ -1.08
VARS-228ENST00000495010 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
VARS-228ENST00000495010 F8VRH5 84 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms