RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 APOMO95445 188 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 ESDP10768 282 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 SNRPEP62304 92 aaKnown RBP6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 FABP9Q0Z7S8 132 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 NUDT10Q8NFP7 164 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 RPL39LQ96EH5 51 aaKnown RBP6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 LINC00526Q96FQ7 95 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 NUDT11Q96G61 164 aa6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 RNASE7Q9H1E1 156 aaKnown RBP6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 RPP21Q9H633 154 aaKnown RBP6.73□□□□□ -1.33
SNRNP200-207ENST00000493271 SMIM27A0A1W2PRY6 76 aa6.72□□□□□ -1.33
SNRNP200-207ENST00000493271 MALP21145 153 aa6.72□□□□□ -1.33
SNRNP200-207ENST00000493271 NDUFA6P56556 154 aa6.72□□□□□ -1.33
SNRNP200-207ENST00000493271 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
SNRNP200-207ENST00000493271 C2orf48Q96LS8 159 aa6.72□□□□□ -1.33
SNRNP200-207ENST00000493271 CDC42SE2Q9NRR3 84 aa6.72□□□□□ -1.33
SNRNP200-207ENST00000493271 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
SNRNP200-207ENST00000493271 A0A1W2PNN7 141 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 A8MWL6 223 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 SMIM6P0DI80 62 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 C9orf116Q5BN46 136 aaPredicted RBP6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 C1orf137Q5JT78 98 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 GNB1LQ9BYB4 327 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 NAT8BQ9UHF3 227 aa6.71□□□□□ -1.34
SNRNP200-207ENST00000493271 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
SNRNP200-207ENST00000493271 COX7A2LO14548 114 aa6.7□□□□□ -1.34
SNRNP200-207ENST00000493271 S100A2P29034 98 aa6.7□□□□□ -1.34
SNRNP200-207ENST00000493271 RNF151Q2KHN1 245 aa6.7□□□□□ -1.34
SNRNP200-207ENST00000493271 COA6Q5JTJ3 125 aaKnown RBP6.7□□□□□ -1.34
SNRNP200-207ENST00000493271 ST20Q9HBF5 79 aa6.7□□□□□ -1.34
SNRNP200-207ENST00000493271 CSDC2Q9Y534 153 aaKnown RBP6.7□□□□□ -1.34
SNRNP200-207ENST00000493271 MUC2Q02817 5179 aa6.69□□□□□ -1.34
SNRNP200-207ENST00000493271 TRBV27A0A0K0K1C4 114 aa6.69□□□□□ -1.34
SNRNP200-207ENST00000493271 F8WDY8 70 aa6.69□□□□□ -1.34
SNRNP200-207ENST00000493271 H0Y9J4 135 aa6.69□□□□□ -1.34
SNRNP200-207ENST00000493271 TSHBP01222 138 aa6.69□□□□□ -1.34
SNRNP200-207ENST00000493271 IGLV7-43P04211 117 aa6.69□□□□□ -1.34
SNRNP200-207ENST00000493271 MRPL18Q9H0U6 180 aaKnown RBP6.69□□□□□ -1.34
SNRNP200-207ENST00000493271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
SNRNP200-207ENST00000493271 RPL13AP40429 203 aaKnown RBP6.68□□□□□ -1.34
SNRNP200-207ENST00000493271 RPL18AQ02543 176 aaKnown RBP6.68□□□□□ -1.34
SNRNP200-207ENST00000493271 LINC00518Q8N0U6 118 aa6.68□□□□□ -1.34
SNRNP200-207ENST00000493271 HIST3H2BBQ8N257 126 aa6.68□□□□□ -1.34
SNRNP200-207ENST00000493271 PRR26Q8N8Z3 221 aa6.68□□□□□ -1.34
SNRNP200-207ENST00000493271 BORCS7Q96B45 105 aa6.68□□□□□ -1.34
SNRNP200-207ENST00000493271 HIGD1CA8MV81 97 aa6.67□□□□□ -1.34
SNRNP200-207ENST00000493271 POLR2KP53803 58 aaKnown RBP6.67□□□□□ -1.34
SNRNP200-207ENST00000493271 MRPL54Q6P161 138 aaKnown RBP6.67□□□□□ -1.34
SNRNP200-207ENST00000493271 TMEM136Q6ZRR5 245 aa6.67□□□□□ -1.34
SNRNP200-207ENST00000493271 PHF5AQ7RTV0 110 aaKnown RBP6.67□□□□□ -1.34
SNRNP200-207ENST00000493271 OR10D4PQ8NGN7 298 aa6.67□□□□□ -1.34
SNRNP200-207ENST00000493271 A0A1B0GW15 77 aa6.66□□□□□ -1.34
SNRNP200-207ENST00000493271 PPP1R17O96001 155 aa6.66□□□□□ -1.34
SNRNP200-207ENST00000493271 FOXA3P55318 350 aaPredicted RBP6.66□□□□□ -1.34
SNRNP200-207ENST00000493271 HBBP68871 147 aa6.66□□□□□ -1.34
SNRNP200-207ENST00000493271 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
SNRNP200-207ENST00000493271 A0A087WZ39 114 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 A0A1B0GXF2 115 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 VCYO14598 125 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 UBE2D1P51668 147 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 SPAG11BQ08648 103 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 C12orf57Q99622 126 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 TMEM191AQ9H0A3 160 aa6.65□□□□□ -1.34
SNRNP200-207ENST00000493271 TLX1NBP0CAT3 122 aa6.64□□□□□ -1.35
SNRNP200-207ENST00000493271 FCER1GP30273 86 aa6.64□□□□□ -1.35
SNRNP200-207ENST00000493271 RIGQ13278 110 aa6.64□□□□□ -1.35
SNRNP200-207ENST00000493271 PRR4Q16378 134 aa6.64□□□□□ -1.35
SNRNP200-207ENST00000493271 TIMM21Q9BVV7 248 aa6.64□□□□□ -1.35
SNRNP200-207ENST00000493271 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
SNRNP200-207ENST00000493271 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
SNRNP200-207ENST00000493271 NDUFA1O15239 70 aa6.63□□□□□ -1.35
SNRNP200-207ENST00000493271 FABP4P15090 132 aa6.63□□□□□ -1.35
SNRNP200-207ENST00000493271 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
SNRNP200-207ENST00000493271 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
SNRNP200-207ENST00000493271 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
SNRNP200-207ENST00000493271 HIST1H2BLQ99880 126 aa6.63□□□□□ -1.35
SNRNP200-207ENST00000493271 TRAV13-1A0A0B4J241 112 aa6.62□□□□□ -1.35
SNRNP200-207ENST00000493271 IFITM10A6NMD0 228 aa6.62□□□□□ -1.35
SNRNP200-207ENST00000493271 TCAPO15273 167 aa6.62□□□□□ -1.35
SNRNP200-207ENST00000493271 KRTAP1-4P0C5Y4 121 aa6.62□□□□□ -1.35
SNRNP200-207ENST00000493271 C5orf38Q86SI9 138 aa6.62□□□□□ -1.35
SNRNP200-207ENST00000493271 BAGE3Q86Y29 109 aa6.62□□□□□ -1.35
SNRNP200-207ENST00000493271 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
SNRNP200-207ENST00000493271 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
SNRNP200-207ENST00000493271 RAB4AP20338 218 aa6.61□□□□□ -1.35
SNRNP200-207ENST00000493271 SUMO2P61956 95 aaKnown RBP6.61□□□□□ -1.35
SNRNP200-207ENST00000493271 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
SNRNP200-207ENST00000493271 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
SNRNP200-207ENST00000493271 SERF1AO75920 110 aa6.6□□□□□ -1.35
SNRNP200-207ENST00000493271 S100A12P80511 92 aa6.6□□□□□ -1.35
SNRNP200-207ENST00000493271 ORAOV1Q8WV07 137 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms