RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
CCM2-217ENST00000492883 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
CCM2-217ENST00000492883 LINC00173Q6ZV60 143 aa9.05□□□□□ -0.96
CCM2-217ENST00000492883 BAGE3Q86Y29 109 aa9.05□□□□□ -0.96
CCM2-217ENST00000492883 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
CCM2-217ENST00000492883 FAM30AQ9NZY2 134 aa9.05□□□□□ -0.96
CCM2-217ENST00000492883 DYNC1H1Q14204 4646 aaKnown RBP9.05□□□□□ -0.96
CCM2-217ENST00000492883 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
CCM2-217ENST00000492883 HBDP02042 147 aa9.04□□□□□ -0.96
CCM2-217ENST00000492883 XGP55808 180 aa9.04□□□□□ -0.96
CCM2-217ENST00000492883 COX6A2Q02221 97 aa9.04□□□□□ -0.96
CCM2-217ENST00000492883 IGHV3-64A0A075B6Q5 118 aa9.03□□□□□ -0.96
CCM2-217ENST00000492883 SEC11AP67812 179 aa9.03□□□□□ -0.96
CCM2-217ENST00000492883 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
CCM2-217ENST00000492883 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
CCM2-217ENST00000492883 A0A096LNJ9 63 aa9.02□□□□□ -0.97
CCM2-217ENST00000492883 NDUFA6P56556 154 aa9.02□□□□□ -0.97
CCM2-217ENST00000492883 HAMPP81172 84 aa9.02□□□□□ -0.97
CCM2-217ENST00000492883 PMVKQ15126 192 aa9.02□□□□□ -0.97
CCM2-217ENST00000492883 CST9LQ9H4G1 147 aa9.02□□□□□ -0.97
CCM2-217ENST00000492883 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
CCM2-217ENST00000492883 PKHD1P08F94 4074 aa9.01□□□□□ -0.97
CCM2-217ENST00000492883 A0A087WZ39 114 aa9.01□□□□□ -0.97
CCM2-217ENST00000492883 HERVK_113P63121 156 aa9.01□□□□□ -0.97
CCM2-217ENST00000492883 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
CCM2-217ENST00000492883 SYCNQ0VAF6 134 aa9.01□□□□□ -0.97
CCM2-217ENST00000492883 SDIM1Q6ZPB5 146 aa9.01□□□□□ -0.97
CCM2-217ENST00000492883 ORAOV1Q8WV07 137 aa9.01□□□□□ -0.97
CCM2-217ENST00000492883 A0A0J9YXV3 536 aa9□□□□□ -0.97
CCM2-217ENST00000492883 HSBP1O75506 76 aa9□□□□□ -0.97
CCM2-217ENST00000492883 ATP5LO75964 103 aa9□□□□□ -0.97
CCM2-217ENST00000492883 PDZD11Q5EBL8 140 aa9□□□□□ -0.97
CCM2-217ENST00000492883 Q6ZSA8 131 aa9□□□□□ -0.97
CCM2-217ENST00000492883 FAM19A3Q7Z5A8 133 aa9□□□□□ -0.97
CCM2-217ENST00000492883 OR10D4PQ8NGN7 298 aa9□□□□□ -0.97
CCM2-217ENST00000492883 DPH3Q96FX2 82 aa9□□□□□ -0.97
CCM2-217ENST00000492883 CARD19Q96LW7 228 aa9□□□□□ -0.97
CCM2-217ENST00000492883 CAMK2N2Q96S95 79 aa9□□□□□ -0.97
CCM2-217ENST00000492883 LINC01561Q8N1V8 128 aa8.99□□□□□ -0.97
CCM2-217ENST00000492883 C2orf48Q96LS8 159 aa8.99□□□□□ -0.97
CCM2-217ENST00000492883 LRP1BQ9NZR2 4599 aa8.98□□□□□ -0.97
CCM2-217ENST00000492883 S100A1P23297 94 aa8.98□□□□□ -0.97
CCM2-217ENST00000492883 PACRGQ96M98 296 aaPredicted RBP8.98□□□□□ -0.97
CCM2-217ENST00000492883 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
CCM2-217ENST00000492883 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
CCM2-217ENST00000492883 TINCRA0A1B0GVN0 87 aa8.97□□□□□ -0.97
CCM2-217ENST00000492883 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
CCM2-217ENST00000492883 Q6ZRU5 148 aa8.97□□□□□ -0.97
CCM2-217ENST00000492883 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
CCM2-217ENST00000492883 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
CCM2-217ENST00000492883 F8WDY8 70 aa8.96□□□□□ -0.98
CCM2-217ENST00000492883 SERF1AO75920 110 aa8.96□□□□□ -0.98
CCM2-217ENST00000492883 SCXQ7RTU7 201 aa8.96□□□□□ -0.98
CCM2-217ENST00000492883 Q8N1X5 172 aa8.96□□□□□ -0.98
CCM2-217ENST00000492883 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
CCM2-217ENST00000492883 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.98
CCM2-217ENST00000492883 DNAH5Q8TE73 4624 aa8.96□□□□□ -0.98
CCM2-217ENST00000492883 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
CCM2-217ENST00000492883 PRSS2P07478 247 aa8.95□□□□□ -0.98
CCM2-217ENST00000492883 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
CCM2-217ENST00000492883 IFI27L1Q96BM0 104 aa8.95□□□□□ -0.98
CCM2-217ENST00000492883 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
CCM2-217ENST00000492883 KIAA1109Q2LD37 5005 aa8.95□□□□□ -0.98
CCM2-217ENST00000492883 NDUFA1O15239 70 aa8.94□□□□□ -0.98
CCM2-217ENST00000492883 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
CCM2-217ENST00000492883 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
CCM2-217ENST00000492883 PANO1I0J062 215 aa8.93□□□□□ -0.98
CCM2-217ENST00000492883 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
CCM2-217ENST00000492883 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
CCM2-217ENST00000492883 UNQ6190/PRO20217Q6UXQ8 127 aa8.93□□□□□ -0.98
CCM2-217ENST00000492883 KRTAP17-1Q9BYP8 105 aa8.93□□□□□ -0.98
CCM2-217ENST00000492883 LOC107984640A0A0U1RRK4 108 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 EPM2AB3EWF7 344 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 H3BRM9 83 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 NUPR1O60356 82 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BKO60814 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 LEPROTL1O95214 131 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BJP06899 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 IGLC3P0DOY3 106 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BOP23527 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BBP33778 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BDP58876 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 LINC00310P59036 64 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 CKS1BP61024 79 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BCP62807 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 GAGE2BQ13066 116 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST2H2BEQ16778 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 RNF151Q2KHN1 245 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 MAJINQ3KP22 176 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.92□□□□□ -0.98
CCM2-217ENST00000492883 C10orf25Q5T742 122 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BHQ93079 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BNQ99877 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 HIST1H2BMQ99879 126 aa8.92□□□□□ -0.98
CCM2-217ENST00000492883 MRPL35Q9NZE8 188 aaKnown RBP8.92□□□□□ -0.98
CCM2-217ENST00000492883 CHTOPQ9Y3Y2 248 aaKnown RBP8.92□□□□□ -0.98
CCM2-217ENST00000492883 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
CCM2-217ENST00000492883 A0A096LNI7 61 aa8.91□□□□□ -0.98
CCM2-217ENST00000492883 C2orf82Q6UX34 121 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms