RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TINCRA0A1B0GVN0 87 aa12.42□□□□□ -0.42
MCF2L-230ENST00000491028 GAGE12HA6NDE8 117 aa12.42□□□□□ -0.42
MCF2L-230ENST00000491028 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
MCF2L-230ENST00000491028 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
MCF2L-230ENST00000491028 Q6ZRN7 208 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-230ENST00000491028 GEMIN7Q9H840 131 aaKnown RBP12.41□□□□□ -0.42
MCF2L-230ENST00000491028 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
MCF2L-230ENST00000491028 HYDINQ4G0P3 5121 aa12.41□□□□□ -0.42
MCF2L-230ENST00000491028 PSCAO43653 123 aa12.4□□□□□ -0.42
MCF2L-230ENST00000491028 FOXI1Q12951 378 aa12.4□□□□□ -0.42
MCF2L-230ENST00000491028 CHAC1Q9BUX1 264 aa12.4□□□□□ -0.42
MCF2L-230ENST00000491028 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
MCF2L-230ENST00000491028 LINC01545Q5VT33 79 aa12.39□□□□□ -0.43
MCF2L-230ENST00000491028 KMT2AQ03164 3969 aa12.38□□□□□ -0.43
MCF2L-230ENST00000491028 IGLV5-45A0A087WSX0 123 aa12.38□□□□□ -0.43
MCF2L-230ENST00000491028 C20orf202A1L168 122 aa12.38□□□□□ -0.43
MCF2L-230ENST00000491028 PLNP26678 52 aa12.38□□□□□ -0.43
MCF2L-230ENST00000491028 COX6A2Q02221 97 aa12.38□□□□□ -0.43
MCF2L-230ENST00000491028 RYR2Q92736 4967 aa12.37□□□□□ -0.43
MCF2L-230ENST00000491028 COX7A2LO14548 114 aa12.37□□□□□ -0.43
MCF2L-230ENST00000491028 DPM2O94777 84 aa12.37□□□□□ -0.43
MCF2L-230ENST00000491028 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
MCF2L-230ENST00000491028 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
MCF2L-230ENST00000491028 AKR1D1P51857 326 aa12.36□□□□□ -0.43
MCF2L-230ENST00000491028 LINC01561Q8N1V8 128 aa12.36□□□□□ -0.43
MCF2L-230ENST00000491028 LINC00469Q8N7U9 141 aa12.36□□□□□ -0.43
MCF2L-230ENST00000491028 A0A087WZ39 114 aa12.35□□□□□ -0.43
MCF2L-230ENST00000491028 ZNF22P17026 224 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-230ENST00000491028 MAPKAPK5-AS1Q8N8E1 139 aa12.35□□□□□ -0.43
MCF2L-230ENST00000491028 CDKN2A-AS1Q9UH64 79 aa12.35□□□□□ -0.43
MCF2L-230ENST00000491028 H3BRM9 83 aa12.34□□□□□ -0.43
MCF2L-230ENST00000491028 IGKCP01834 107 aa12.34□□□□□ -0.43
MCF2L-230ENST00000491028 MALP21145 153 aa12.34□□□□□ -0.43
MCF2L-230ENST00000491028 C5orf38Q86SI9 138 aa12.34□□□□□ -0.43
MCF2L-230ENST00000491028 PMCHL2Q9BQD1 86 aa12.34□□□□□ -0.43
MCF2L-230ENST00000491028 APOMO95445 188 aa12.33□□□□□ -0.44
MCF2L-230ENST00000491028 IGHV1-58A0A0C4DH39 117 aa12.32□□□□□ -0.44
MCF2L-230ENST00000491028 RTL8CO15255 209 aa12.32□□□□□ -0.44
MCF2L-230ENST00000491028 TMEM170BQ5T4T1 132 aa12.32□□□□□ -0.44
MCF2L-230ENST00000491028 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
MCF2L-230ENST00000491028 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
MCF2L-230ENST00000491028 IGHV3-64A0A075B6Q5 118 aa12.29□□□□□ -0.44
MCF2L-230ENST00000491028 LRCOL1A6NCL2 159 aa12.29□□□□□ -0.44
MCF2L-230ENST00000491028 SMIM1B2RUZ4 78 aa12.29□□□□□ -0.44
MCF2L-230ENST00000491028 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
MCF2L-230ENST00000491028 C15orf56Q8N910 161 aa12.29□□□□□ -0.44
MCF2L-230ENST00000491028 TMEM223A0PJW6 202 aa12.28□□□□□ -0.44
MCF2L-230ENST00000491028 DNAH2Q9P225 4427 aa12.27□□□□□ -0.44
MCF2L-230ENST00000491028 GVQW2A0A096LPI5 108 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-230ENST00000491028 SPINK8P0C7L1 97 aa12.27□□□□□ -0.45
MCF2L-230ENST00000491028 LINC00336Q6ZUF6 198 aa12.27□□□□□ -0.45
MCF2L-230ENST00000491028 ORAOV1Q8WV07 137 aa12.27□□□□□ -0.45
MCF2L-230ENST00000491028 A0A087WTM6 91 aa12.26□□□□□ -0.45
MCF2L-230ENST00000491028 LECT2O14960 151 aa12.26□□□□□ -0.45
MCF2L-230ENST00000491028 SCGB1D1O95968 90 aa12.26□□□□□ -0.45
MCF2L-230ENST00000491028 HERVK_113P61574 105 aa12.26□□□□□ -0.45
MCF2L-230ENST00000491028 WFDC2Q14508 124 aa12.26□□□□□ -0.45
MCF2L-230ENST00000491028 JOSD1Q15040 202 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-230ENST00000491028 DNAH10Q8IVF4 4471 aa12.26□□□□□ -0.45
MCF2L-230ENST00000491028 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
MCF2L-230ENST00000491028 TNP2Q05952 138 aa12.25□□□□□ -0.45
MCF2L-230ENST00000491028 EREGO14944 169 aa12.24□□□□□ -0.45
MCF2L-230ENST00000491028 SPAG11BQ08648 103 aa12.24□□□□□ -0.45
MCF2L-230ENST00000491028 Q8IZM0 81 aa12.24□□□□□ -0.45
MCF2L-230ENST00000491028 ZNF561-AS1K7EIQ3 104 aa12.23□□□□□ -0.45
MCF2L-230ENST00000491028 HIGD2BQ4VC39 106 aa12.23□□□□□ -0.45
MCF2L-230ENST00000491028 ATOH7Q8N100 152 aa12.23□□□□□ -0.45
MCF2L-230ENST00000491028 Q8N814 137 aa12.23□□□□□ -0.45
MCF2L-230ENST00000491028 hDV102S1A0JD36 115 aa12.22□□□□□ -0.45
MCF2L-230ENST00000491028 PRSS2P07478 247 aa12.22□□□□□ -0.45
MCF2L-230ENST00000491028 F8WDY8 70 aa12.21□□□□□ -0.45
MCF2L-230ENST00000491028 KIAA0087Q14695 138 aa12.21□□□□□ -0.45
MCF2L-230ENST00000491028 COX7B2Q8TF08 81 aa12.21□□□□□ -0.45
MCF2L-230ENST00000491028 C2orf48Q96LS8 159 aa12.21□□□□□ -0.45
MCF2L-230ENST00000491028 TOMM7Q9P0U1 55 aa12.21□□□□□ -0.45
MCF2L-230ENST00000491028 DNAH17Q9UFH2 4485 aa12.21□□□□□ -0.46
MCF2L-230ENST00000491028 E9PLD3 99 aa12.2□□□□□ -0.46
MCF2L-230ENST00000491028 CXCL5P42830 114 aa12.2□□□□□ -0.46
MCF2L-230ENST00000491028 PYY3Q5JQD4 70 aa12.2□□□□□ -0.46
MCF2L-230ENST00000491028 FRAS1Q86XX4 4008 aa12.2□□□□□ -0.46
MCF2L-230ENST00000491028 LOC105371267A0A1B0GV96 52 aa12.19□□□□□ -0.46
MCF2L-230ENST00000491028 LEPROTO15243 131 aa12.19□□□□□ -0.46
MCF2L-230ENST00000491028 STPG4Q8N801 248 aa12.19□□□□□ -0.46
MCF2L-230ENST00000491028 NTN5Q8WTR8 489 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-230ENST00000491028 PLEKHB2Q96CS7 222 aa12.19□□□□□ -0.46
MCF2L-230ENST00000491028 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
MCF2L-230ENST00000491028 C6orf226Q5I0X4 101 aa12.18□□□□□ -0.46
MCF2L-230ENST00000491028 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
MCF2L-230ENST00000491028 EPPK1P58107 5090 aaKnown RBP12.16□□□□□ -0.46
MCF2L-230ENST00000491028 NDUFA1O15239 70 aa12.16□□□□□ -0.46
MCF2L-230ENST00000491028 CKS1BP61024 79 aa12.16□□□□□ -0.46
MCF2L-230ENST00000491028 CNBPP62633 177 aaKnown RBP12.16□□□□□ -0.46
MCF2L-230ENST00000491028 LINC00526Q96FQ7 95 aa12.16□□□□□ -0.46
MCF2L-230ENST00000491028 CAMK2N2Q96S95 79 aa12.16□□□□□ -0.46
MCF2L-230ENST00000491028 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-230ENST00000491028 J3QQQ9 107 aa12.15□□□□□ -0.46
MCF2L-230ENST00000491028 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-230ENST00000491028 LGALS3P17931 250 aaKnown RBP12.14□□□□□ -0.47
MCF2L-230ENST00000491028 SYCNQ0VAF6 134 aa12.14□□□□□ -0.47
MCF2L-230ENST00000491028 ANKRD39Q53RE8 183 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms