RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 BAGE3Q86Y29 109 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 OR5A1Q8NGJ0 315 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 PRSS3P2Q8NHM4 247 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 C18orf32Q8TCD1 76 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 CHCHD10Q8WYQ3 142 aaPredicted RBP6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 HIST1H2BHQ93079 126 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 HIST1H2BNQ99877 126 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 HIST1H2BMQ99879 126 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 SMIM2Q9BVW6 85 aa6.18□□□□□ -1.42
TMEM39A-210ENST00000490099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 IGKV2-29A2NJV5 120 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 VCYO14598 125 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 S100A6P06703 90 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 RPL37AP61513 92 aaKnown RBP6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 AMMECR1LQ6DCA0 310 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 FA2HQ7L5A8 372 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 Q8N8P6 123 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 SPACA4Q8TDM5 124 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 KIR2DL4Q99706 377 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
TMEM39A-210ENST00000490099 A0A087WYN8 130 aa6.16□□□□□ -1.42
TMEM39A-210ENST00000490099 LOC389332A0A1B0GUA5 103 aa6.16□□□□□ -1.42
TMEM39A-210ENST00000490099 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
TMEM39A-210ENST00000490099 G0S2P27469 103 aa6.16□□□□□ -1.42
TMEM39A-210ENST00000490099 CHCHD1Q96BP2 118 aaKnown RBP6.16□□□□□ -1.42
TMEM39A-210ENST00000490099 CSDC2Q9Y534 153 aaKnown RBP6.16□□□□□ -1.42
TMEM39A-210ENST00000490099 LINC01549A6NIU2 74 aa6.15□□□□□ -1.42
TMEM39A-210ENST00000490099 CHTF8P0CG12 524 aa6.15□□□□□ -1.42
TMEM39A-210ENST00000490099 FCER1GP30273 86 aa6.15□□□□□ -1.42
TMEM39A-210ENST00000490099 ORMDL2Q53FV1 153 aa6.15□□□□□ -1.42
TMEM39A-210ENST00000490099 RNASEKQ6P5S7 137 aaKnown RBP6.15□□□□□ -1.42
TMEM39A-210ENST00000490099 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 IGKV3OR2-268A0A0C4DH90 116 aa6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 LINC00614P0C842 121 aa6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 NDUFA6P56556 154 aa6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 COX6A2Q02221 97 aa6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 COA6Q5JTJ3 125 aaKnown RBP6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 CD164L2Q6UWJ8 174 aa6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 ZNF664Q8N3J9 261 aa6.14□□□□□ -1.43
TMEM39A-210ENST00000490099 LINC01546A6NGU7 62 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 HSBP1O75506 76 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 SMAGPQ0VAQ4 97 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 SERTAD4-AS1Q5TG53 156 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 TMEM18Q96B42 140 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 TMEM101Q96IK0 257 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 TIMM21Q9BVV7 248 aa6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 TMA7Q9Y2S6 64 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-210ENST00000490099 PKHD1L1Q86WI1 4243 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 CCL25O15444 150 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 SERF1AO75920 110 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 XCL1P47992 114 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 HIGD2BQ4VC39 106 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 Q6ZRU5 148 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 FAM104AQ969W3 186 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 UBE2D4Q9Y2X8 147 aa6.12□□□□□ -1.43
TMEM39A-210ENST00000490099 S100A2P29034 98 aa6.11□□□□□ -1.43
TMEM39A-210ENST00000490099 SS18Q15532 418 aa6.11□□□□□ -1.43
TMEM39A-210ENST00000490099 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
TMEM39A-210ENST00000490099 HBDP02042 147 aa6.1□□□□□ -1.43
TMEM39A-210ENST00000490099 DPH3Q96FX2 82 aa6.1□□□□□ -1.43
TMEM39A-210ENST00000490099 URB1-AS1Q96HZ7 61 aa6.1□□□□□ -1.43
TMEM39A-210ENST00000490099 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
TMEM39A-210ENST00000490099 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
TMEM39A-210ENST00000490099 CYSLTR1Q9Y271 337 aa6.1□□□□□ -1.43
TMEM39A-210ENST00000490099 A0A096LNI7 61 aa6.09□□□□□ -1.43
TMEM39A-210ENST00000490099 C5orf52A6NGY3 159 aa6.09□□□□□ -1.43
TMEM39A-210ENST00000490099 LINC00310P59036 64 aa6.09□□□□□ -1.43
TMEM39A-210ENST00000490099 SNRPEP62304 92 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-210ENST00000490099 LINC00526Q96FQ7 95 aa6.09□□□□□ -1.43
TMEM39A-210ENST00000490099 PACRGQ96M98 296 aaPredicted RBP6.09□□□□□ -1.43
TMEM39A-210ENST00000490099 LINC00474Q9P2X8 69 aa6.09□□□□□ -1.43
TMEM39A-210ENST00000490099 NPSP0C0P6 89 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 SYCNQ0VAF6 134 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 MAJINQ3KP22 176 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 C2orf66Q6UXQ4 117 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 TOMM6Q96B49 74 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 HSPB8Q9UJY1 196 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 PKIGQ9Y2B9 76 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
TMEM39A-210ENST00000490099 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 ATP5LO75964 103 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 LEPROTL1O95214 131 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 MRPS36P82909 103 aaKnown RBP6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 FAM19A2Q8N3H0 131 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 STPG4Q8N801 248 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 C2orf48Q96LS8 159 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 CARD19Q96LW7 228 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 SPANXA1Q9NS26 97 aa6.07□□□□□ -1.44
TMEM39A-210ENST00000490099 IGHV3OR16-9A0A0B4J2B5 98 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 282 ms