RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 AMN1Q8IY45 258 aa8.31□□□□□ -1.08
VARS-227ENST00000489979 F8WDY8 70 aa8.3□□□□□ -1.08
VARS-227ENST00000489979 M0QXV9 152 aa8.3□□□□□ -1.08
VARS-227ENST00000489979 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
VARS-227ENST00000489979 FAM231DQ6ZW35 169 aa8.3□□□□□ -1.08
VARS-227ENST00000489979 C6orf48Q9UBA6 75 aa8.3□□□□□ -1.08
VARS-227ENST00000489979 CARHSP1Q9Y2V2 147 aaKnown RBP8.3□□□□□ -1.08
VARS-227ENST00000489979 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
VARS-227ENST00000489979 ZNF727A8MUV8 499 aa8.29□□□□□ -1.08
VARS-227ENST00000489979 IFITM2Q01629 132 aa8.29□□□□□ -1.08
VARS-227ENST00000489979 TMEM241Q24JQ0 296 aa8.29□□□□□ -1.08
VARS-227ENST00000489979 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
VARS-227ENST00000489979 SMDT1Q9H4I9 107 aa8.29□□□□□ -1.08
VARS-227ENST00000489979 IGHV3OR16-9A0A0B4J2B5 98 aa8.28□□□□□ -1.08
VARS-227ENST00000489979 SUMO2P61956 95 aaKnown RBP8.28□□□□□ -1.08
VARS-227ENST00000489979 FAM74A3Q4VXF1 159 aa8.28□□□□□ -1.08
VARS-227ENST00000489979 CT83Q5H943 113 aa8.28□□□□□ -1.08
VARS-227ENST00000489979 NRACQ8N912 160 aa8.28□□□□□ -1.08
VARS-227ENST00000489979 KIR2DL4Q99706 377 aa8.28□□□□□ -1.08
VARS-227ENST00000489979 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
VARS-227ENST00000489979 HIGD1CA8MV81 97 aa8.27□□□□□ -1.09
VARS-227ENST00000489979 TMEM18Q96B42 140 aa8.27□□□□□ -1.09
VARS-227ENST00000489979 ZNF861PO60384 105 aa8.26□□□□□ -1.09
VARS-227ENST00000489979 SRP19P09132 144 aaKnown RBP8.26□□□□□ -1.09
VARS-227ENST00000489979 PPP1R17O96001 155 aa8.25□□□□□ -1.09
VARS-227ENST00000489979 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
VARS-227ENST00000489979 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
VARS-227ENST00000489979 PPP1R2P9O14990 202 aa8.24□□□□□ -1.09
VARS-227ENST00000489979 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
VARS-227ENST00000489979 KIAA0087Q14695 138 aa8.23□□□□□ -1.09
VARS-227ENST00000489979 NAT8Q9UHE5 227 aa8.23□□□□□ -1.09
VARS-227ENST00000489979 IFITM10A6NMD0 228 aa8.22□□□□□ -1.09
VARS-227ENST00000489979 RIGQ13278 110 aa8.22□□□□□ -1.09
VARS-227ENST00000489979 CLLU1Q5K131 121 aa8.22□□□□□ -1.09
VARS-227ENST00000489979 LINC01551Q86U37 167 aa8.22□□□□□ -1.09
VARS-227ENST00000489979 A0A087X002 238 aa8.21□□□□□ -1.1
VARS-227ENST00000489979 TRBV30A0A0K0K1B3 111 aa8.21□□□□□ -1.1
VARS-227ENST00000489979 NDUFC2-KCTD14E9PQ53 114 aa8.21□□□□□ -1.1
VARS-227ENST00000489979 HBBP68871 147 aa8.21□□□□□ -1.1
VARS-227ENST00000489979 ADIRFQ15847 76 aa8.21□□□□□ -1.1
VARS-227ENST00000489979 MRPL51Q4U2R6 128 aaKnown RBP8.21□□□□□ -1.1
VARS-227ENST00000489979 C2orf82Q6UX34 121 aa8.21□□□□□ -1.1
VARS-227ENST00000489979 SPANXA1Q9NS26 97 aa8.21□□□□□ -1.1
VARS-227ENST00000489979 TGIF2-C20orf24A0A0A6YYL0 155 aa8.2□□□□□ -1.1
VARS-227ENST00000489979 MRPS36P82909 103 aaKnown RBP8.2□□□□□ -1.1
VARS-227ENST00000489979 OSTCQ9NRP0 149 aa8.2□□□□□ -1.1
VARS-227ENST00000489979 NUPR1O60356 82 aa8.19□□□□□ -1.1
VARS-227ENST00000489979 FAM104BQ5XKR9 115 aa8.19□□□□□ -1.1
VARS-227ENST00000489979 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
VARS-227ENST00000489979 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
VARS-227ENST00000489979 C20orf78Q9BR46 151 aa8.19□□□□□ -1.1
VARS-227ENST00000489979 CTDSP1Q9GZU7 261 aa8.19□□□□□ -1.1
VARS-227ENST00000489979 TCAPO15273 167 aa8.18□□□□□ -1.1
VARS-227ENST00000489979 RPL23P62829 140 aaKnown RBP8.18□□□□□ -1.1
VARS-227ENST00000489979 RPL32P62910 135 aaKnown RBP8.18□□□□□ -1.1
VARS-227ENST00000489979 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
VARS-227ENST00000489979 C22orf24Q9Y442 160 aa8.18□□□□□ -1.1
VARS-227ENST00000489979 TRBV24-1A0A075B6N3 115 aa8.17□□□□□ -1.1
VARS-227ENST00000489979 CRYGAP11844 174 aa8.17□□□□□ -1.1
VARS-227ENST00000489979 UQCC3Q6UW78 93 aa8.17□□□□□ -1.1
VARS-227ENST00000489979 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
VARS-227ENST00000489979 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
VARS-227ENST00000489979 V9GYV3 84 aa8.17□□□□□ -1.1
VARS-227ENST00000489979 LINC00862A6NCI5 91 aa8.16□□□□□ -1.1
VARS-227ENST00000489979 C9JQL5 133 aa8.16□□□□□ -1.1
VARS-227ENST00000489979 TNFRSF6BO95407 300 aa8.16□□□□□ -1.1
VARS-227ENST00000489979 CKS2P33552 79 aa8.16□□□□□ -1.1
VARS-227ENST00000489979 PNRC1Q12796 327 aaPredicted RBP8.16□□□□□ -1.1
VARS-227ENST00000489979 LINC00242Q5T6M2 205 aa8.16□□□□□ -1.1
VARS-227ENST00000489979 SMIM2Q9BVW6 85 aa8.16□□□□□ -1.1
VARS-227ENST00000489979 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
VARS-227ENST00000489979 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
VARS-227ENST00000489979 CDIP1Q9H305 208 aa8.15□□□□□ -1.1
VARS-227ENST00000489979 NAT8BQ9UHF3 227 aa8.15□□□□□ -1.1
VARS-227ENST00000489979 XAGE1AQ9HD64 81 aa8.14□□□□□ -1.11
VARS-227ENST00000489979 ANAPC11Q9NYG5 84 aa8.14□□□□□ -1.11
VARS-227ENST00000489979 BCE1O60756 84 aa8.13□□□□□ -1.11
VARS-227ENST00000489979 IFI27P40305 119 aaPredicted RBP8.13□□□□□ -1.11
VARS-227ENST00000489979 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 D6R8Y8 96 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 NPYP01303 97 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 MT-ND4LP03901 98 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 S100A8P05109 93 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 COMMD7Q86VX2 200 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 LINC01561Q8N1V8 128 aa8.12□□□□□ -1.11
VARS-227ENST00000489979 F8W036 122 aa8.11□□□□□ -1.11
VARS-227ENST00000489979 PRSS2P07478 247 aa8.11□□□□□ -1.11
VARS-227ENST00000489979 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
VARS-227ENST00000489979 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
VARS-227ENST00000489979 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
VARS-227ENST00000489979 TOMM7Q9P0U1 55 aa8.11□□□□□ -1.11
VARS-227ENST00000489979 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
VARS-227ENST00000489979 A0A1B0GW15 77 aa8.1□□□□□ -1.11
VARS-227ENST00000489979 CKS1BP61024 79 aa8.1□□□□□ -1.11
VARS-227ENST00000489979 LINC00304Q8N9R0 145 aa8.1□□□□□ -1.11
VARS-227ENST00000489979 TMEM141Q96I45 108 aa8.1□□□□□ -1.11
VARS-227ENST00000489979 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
VARS-227ENST00000489979 IGLV7-46A0A075B6I9 117 aa8.09□□□□□ -1.11
VARS-227ENST00000489979 SMIM27A0A1W2PRY6 76 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms