RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PPP1R17O96001 155 aa10.19□□□□□ -0.78
TOP3B-217ENST00000489581 IGHV3OR16-9A0A0B4J2B5 98 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 UBE2D1P51668 147 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 RPL39P62891 51 aaKnown RBP10.18□□□□□ -0.78
TOP3B-217ENST00000489581 RIGQ13278 110 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 LINC01551Q86U37 167 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 C6orf48Q9UBA6 75 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 F8WDY8 70 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 TLX1NBP0CAT3 122 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 TMEM241Q24JQ0 296 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 OSTCQ9NRP0 149 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 UBE2BP63146 152 aa10.16□□□□□ -0.78
TOP3B-217ENST00000489581 MRPL51Q4U2R6 128 aaKnown RBP10.16□□□□□ -0.78
TOP3B-217ENST00000489581 M0QXV9 152 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 BLOC1S1P78537 153 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 KRTAP9-2Q9BYQ4 174 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 TCTE3Q8IZS6 198 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 V9GYV3 84 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
TOP3B-217ENST00000489581 RPL13AP40429 203 aaKnown RBP10.13□□□□□ -0.79
TOP3B-217ENST00000489581 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 IFITM10A6NMD0 228 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 C20orf78Q9BR46 151 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 EIF5A2Q9GZV4 153 aaKnown RBP10.12□□□□□ -0.79
TOP3B-217ENST00000489581 SPANXA1Q9NS26 97 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 HBBP68871 147 aa10.11□□□□□ -0.79
TOP3B-217ENST00000489581 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
TOP3B-217ENST00000489581 KIAA0087Q14695 138 aa10.11□□□□□ -0.79
TOP3B-217ENST00000489581 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 LINC00862A6NCI5 91 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 TCAPO15273 167 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 TSPAN13O95857 204 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 CKS2P33552 79 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
TOP3B-217ENST00000489581 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 TNFRSF6BO95407 300 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
TOP3B-217ENST00000489581 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
TOP3B-217ENST00000489581 SRP19P09132 144 aaKnown RBP10.08□□□□□ -0.8
TOP3B-217ENST00000489581 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 NDUFC2-KCTD14E9PQ53 114 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 ZNF861PO60384 105 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 FAM74A3Q4VXF1 159 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 D6R8Y8 96 aa10.06□□□□□ -0.8
TOP3B-217ENST00000489581 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
TOP3B-217ENST00000489581 NPYP01303 97 aa10.05□□□□□ -0.8
TOP3B-217ENST00000489581 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
TOP3B-217ENST00000489581 SMIM27A0A1W2PRY6 76 aa10.04□□□□□ -0.8
TOP3B-217ENST00000489581 RPL23P62829 140 aaKnown RBP10.04□□□□□ -0.8
TOP3B-217ENST00000489581 IFI27P40305 119 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-217ENST00000489581 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
TOP3B-217ENST00000489581 A0A1B0GW15 77 aa10.02□□□□□ -0.81
TOP3B-217ENST00000489581 ADIRFQ15847 76 aa10.02□□□□□ -0.81
TOP3B-217ENST00000489581 MRPL54Q6P161 138 aaKnown RBP10.02□□□□□ -0.81
TOP3B-217ENST00000489581 C22orf24Q9Y442 160 aa10.02□□□□□ -0.81
TOP3B-217ENST00000489581 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
TOP3B-217ENST00000489581 RAB5AP20339 215 aa10.01□□□□□ -0.81
TOP3B-217ENST00000489581 CTDSP1Q9GZU7 261 aa10.01□□□□□ -0.81
TOP3B-217ENST00000489581 A0A087X002 238 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 NUPR1O60356 82 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 TMEM141Q96I45 108 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 F8W036 122 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 ZC2HC1BQ5TFG8 222 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 FAT4Q6V0I7 4981 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 PPBPP02775 128 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 PRSS2P07478 247 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 TEX43Q6ZNM6 134 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 LINC01561Q8N1V8 128 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 S100A8P05109 93 aa9.97□□□□□ -0.81
TOP3B-217ENST00000489581 CKS1BP61024 79 aa9.97□□□□□ -0.81
TOP3B-217ENST00000489581 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
TOP3B-217ENST00000489581 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
TOP3B-217ENST00000489581 A0A1B0GXF2 115 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 C9JQL5 133 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 CRYGAP11844 174 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 Q6ZN92 141 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 TMEM136Q6ZRR5 245 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 RPL28P46779 137 aaKnown RBP9.95□□□□□ -0.82
TOP3B-217ENST00000489581 AKAP14Q86UN6 197 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 C2orf88Q9BSF0 95 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 ANAPC11Q9NYG5 84 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
TOP3B-217ENST00000489581 LINC00173Q6ZV60 143 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms