RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 hADV29S1A0JD25 119 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 C18orf65Q6ZTR6 163 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 LINC00467Q9BRT7 94 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 ITPR2Q14571 2701 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 IGLV5-39A0A0G2JS06 123 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 A0A0U1RRA0 63 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
RER1-207ENST00000488353 Q9UF83 564 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 ACANP16112 2415 aa10.24□□□□□ -0.77
RER1-207ENST00000488353 SOSTDC1Q6X4U4 206 aa10.23□□□□□ -0.77
RER1-207ENST00000488353 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.23□□□□□ -0.77
RER1-207ENST00000488353 FAM218AQ96MZ4 157 aa10.23□□□□□ -0.77
RER1-207ENST00000488353 NF1P21359 2839 aa10.23□□□□□ -0.77
RER1-207ENST00000488353 MALP21145 153 aa10.23□□□□□ -0.77
RER1-207ENST00000488353 SLURP1P55000 103 aa10.23□□□□□ -0.77
RER1-207ENST00000488353 DEFB131AP59861 70 aa10.23□□□□□ -0.77
RER1-207ENST00000488353 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
RER1-207ENST00000488353 PLA2G2AP14555 144 aa10.22□□□□□ -0.77
RER1-207ENST00000488353 ZNF415Q09FC8 603 aa10.22□□□□□ -0.77
RER1-207ENST00000488353 DGAT2L7PQ6IED9 249 aa10.22□□□□□ -0.77
RER1-207ENST00000488353 RNF152Q8N8N0 203 aa10.22□□□□□ -0.77
RER1-207ENST00000488353 TMEM89A2RUT3 159 aa10.21□□□□□ -0.77
RER1-207ENST00000488353 TMEM258P61165 79 aa10.21□□□□□ -0.77
RER1-207ENST00000488353 COX6A2Q02221 97 aa10.21□□□□□ -0.77
RER1-207ENST00000488353 PRIMA1Q86XR5 153 aa10.21□□□□□ -0.77
RER1-207ENST00000488353 J3QKU1 62 aa10.2□□□□□ -0.78
RER1-207ENST00000488353 DNAL4O96015 105 aa10.2□□□□□ -0.78
RER1-207ENST00000488353 SETD2Q9BYW2 2564 aaPredicted RBP10.2□□□□□ -0.78
RER1-207ENST00000488353 WNK1Q9H4A3 2382 aa10.2□□□□□ -0.78
RER1-207ENST00000488353 PF4P02776 101 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 UBE2E2Q96LR5 201 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 Q9HAA7 133 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 TRAV13-1A0A0B4J241 112 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 WIPF1O43516 503 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 Q6ZSN1 163 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 SERP2Q8N6R1 65 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 HECTD1Q9ULT8 2610 aa10.19□□□□□ -0.78
RER1-207ENST00000488353 RBMY1BA6NDE4 496 aaKnown RBP10.18□□□□□ -0.78
RER1-207ENST00000488353 RBMY1EA6NEQ0 496 aaKnown RBP10.18□□□□□ -0.78
RER1-207ENST00000488353 RBMY1DP0C7P1 496 aaKnown RBP10.18□□□□□ -0.78
RER1-207ENST00000488353 RPL28P46779 137 aaKnown RBP10.18□□□□□ -0.78
RER1-207ENST00000488353 KHDC1LQ5JSQ8 128 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 PIK3CD-AS1Q5SR53 167 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 DPH3Q96FX2 82 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 OVOL2Q9BRP0 275 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 AKAP9Q99996 3911 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 CYSTM1Q9H1C7 97 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 PDZD2O15018 2839 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 MTORP42345 2549 aa10.18□□□□□ -0.78
RER1-207ENST00000488353 FASNP49327 2511 aaKnown RBP10.18□□□□□ -0.78
RER1-207ENST00000488353 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
RER1-207ENST00000488353 IGHV3-38A0A0C4DH36 116 aa10.17□□□□□ -0.78
RER1-207ENST00000488353 Q6JHZ5 121 aa10.17□□□□□ -0.78
RER1-207ENST00000488353 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
RER1-207ENST00000488353 NOTCH3Q9UM47 2321 aa10.17□□□□□ -0.78
RER1-207ENST00000488353 IGHV3-53P01767 116 aa10.15□□□□□ -0.78
RER1-207ENST00000488353 FAM19A3Q7Z5A8 133 aa10.15□□□□□ -0.78
RER1-207ENST00000488353 UPK3BQ9BT76 320 aa10.15□□□□□ -0.78
RER1-207ENST00000488353 IGKV3D-7A0A0C4DH55 119 aa10.14□□□□□ -0.79
RER1-207ENST00000488353 CRPP02741 224 aa10.14□□□□□ -0.79
RER1-207ENST00000488353 KIR2DL5BQ8NHK3 375 aa10.14□□□□□ -0.79
RER1-207ENST00000488353 C14orf132Q9NPU4 83 aa10.14□□□□□ -0.79
RER1-207ENST00000488353 UNC79Q9P2D8 2635 aa10.14□□□□□ -0.79
RER1-207ENST00000488353 C11orf44Q8N8P7 122 aa10.14□□□□□ -0.79
RER1-207ENST00000488353 LINC00846Q9NV44 126 aa10.13□□□□□ -0.79
RER1-207ENST00000488353 TRAV25A0A0B4J276 109 aa10.13□□□□□ -0.79
RER1-207ENST00000488353 OBSCN-AS1Q96MR7 158 aa10.13□□□□□ -0.79
RER1-207ENST00000488353 NOTCH2Q04721 2471 aa10.12□□□□□ -0.79
RER1-207ENST00000488353 DNAJC9-AS1A6NH13 148 aa10.12□□□□□ -0.79
RER1-207ENST00000488353 RS1O15537 224 aa10.12□□□□□ -0.79
RER1-207ENST00000488353 USP17L23D6RBM5 183 aa10.12□□□□□ -0.79
RER1-207ENST00000488353 ESM1Q9NQ30 184 aa10.12□□□□□ -0.79
RER1-207ENST00000488353 H0YGX0 51 aa10.11□□□□□ -0.79
RER1-207ENST00000488353 LINC01561Q8N1V8 128 aa10.11□□□□□ -0.79
RER1-207ENST00000488353 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
RER1-207ENST00000488353 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
RER1-207ENST00000488353 DYNLRB2Q8TF09 96 aa10.11□□□□□ -0.79
RER1-207ENST00000488353 MAP6D1Q9H9H5 199 aa10.11□□□□□ -0.79
RER1-207ENST00000488353 NIPBLQ6KC79 2804 aaeCLIP10.11□□□□□ -0.79
RER1-207ENST00000488353 A0A087WVE0 104 aa10.1□□□□□ -0.79
RER1-207ENST00000488353 A0A087WYN8 130 aa10.1□□□□□ -0.79
RER1-207ENST00000488353 F5H768 121 aa10.1□□□□□ -0.79
RER1-207ENST00000488353 C4orf3Q8WVX3 66 aa10.1□□□□□ -0.79
RER1-207ENST00000488353 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
RER1-207ENST00000488353 A0A1W2PRX2 142 aa10.09□□□□□ -0.79
RER1-207ENST00000488353 KRTAP1-1Q07627 177 aa10.09□□□□□ -0.79
RER1-207ENST00000488353 SND1-IT1Q9HBX3 110 aa10.09□□□□□ -0.79
RER1-207ENST00000488353 XCL2Q9UBD3 114 aa10.09□□□□□ -0.79
RER1-207ENST00000488353 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
RER1-207ENST00000488353 IGKV2-28A0A075B6P5 120 aa10.08□□□□□ -0.8
RER1-207ENST00000488353 IGKV2D-28P01615 120 aa10.08□□□□□ -0.8
RER1-207ENST00000488353 C11orf72Q8NBR9 251 aa10.08□□□□□ -0.8
RER1-207ENST00000488353 C2CD3Q4AC94 2353 aa10.08□□□□□ -0.8
RER1-207ENST00000488353 A8MTW9 85 aa10.08□□□□□ -0.8
RER1-207ENST00000488353 OXTP01178 125 aa10.08□□□□□ -0.8
RER1-207ENST00000488353 MIR7-3HGQ8N6C7 128 aa10.07□□□□□ -0.8
RER1-207ENST00000488353 DEFB114Q30KQ6 69 aa10.06□□□□□ -0.8
RER1-207ENST00000488353 TMEM86BQ8N661 226 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms