RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CNFNQ9BYD5 112 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 ZNF469Q96JG9 3925 aaPredicted RBP1.72□□□□□ -2.13
LINC00888-204ENST00000487386 HIVEP1P15822 2718 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 IGHV1-24A0A0C4DH33 117 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 LOC389332A0A1B0GUA5 103 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 C20orf202A1L168 122 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 LYRM9A8MSI8 78 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 A8MWV9 139 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 H7C1H1 209 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 M0R2P5 195 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 DEFB4AO15263 64 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 GNRH2O43555 120 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 SMIM6P0DI80 62 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 HTN3P15516 51 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 FCER1GP30273 86 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 CKS2P33552 79 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 PMCHL1Q16048 86 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 TDRG1Q3Y452 100 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 MRPL51Q4U2R6 128 aaKnown RBP1.71□□□□□ -2.14
LINC00888-204ENST00000487386 FAM104BQ5XKR9 115 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 Q6ZTI0 123 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 C1orf158Q8N1D5 194 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 HIST3H2BBQ8N257 126 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 GATD1Q8NB37 220 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 RPL39LQ96EH5 51 aaKnown RBP1.71□□□□□ -2.14
LINC00888-204ENST00000487386 CHCHD7Q9BUK0 85 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 SMIM2Q9BVW6 85 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 TMEM191AQ9H0A3 160 aa1.71□□□□□ -2.14
LINC00888-204ENST00000487386 NOP10Q9NPE3 64 aaKnown RBP1.71□□□□□ -2.14
LINC00888-204ENST00000487386 ZMAT5Q9UDW3 170 aaKnown RBP1.71□□□□□ -2.14
LINC00888-204ENST00000487386 TEX15Q9BXT5 2789 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 SETXQ7Z333 2677 aaKnown RBP1.7□□□□□ -2.14
LINC00888-204ENST00000487386 TRAV4A0A0B4J268 109 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 TRGV4A0A0C4DH28 118 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 HBDP02042 147 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 PPBPP02775 128 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 PRM2P04554 102 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 DEFB130BP0DP73 79 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 DEFB130AP0DP74 79 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 MIFP14174 115 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 KRTDAPP60985 99 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 DAD1P61803 113 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 RHOHQ15669 191 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 ZNF705AQ6ZN79 300 aaPredicted RBP1.7□□□□□ -2.14
LINC00888-204ENST00000487386 Q8NAQ8 132 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 OR4C5Q8NGB2 326 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 OR10D4PQ8NGN7 298 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 OR11H2Q8NH07 326 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 C18orf15Q96N68 181 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 HIST1H2BLQ99880 126 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 LINC00467Q9BRT7 94 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 C11orf68Q9H3H3 251 aaKnown RBP1.7□□□□□ -2.14
LINC00888-204ENST00000487386 NXT2Q9NPJ8 142 aaKnown RBP1.7□□□□□ -2.14
LINC00888-204ENST00000487386 TP53TG1Q9Y2A0 90 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 LAMTOR2Q9Y2Q5 125 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 CUBNO60494 3623 aa1.7□□□□□ -2.14
LINC00888-204ENST00000487386 LOC105371267A0A1B0GV96 52 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 SDHAF1A6NFY7 115 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 K7EIL1 84 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 UBE2L6O14933 153 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 TCAPO15273 167 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 LEPROTL1O95214 131 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 PPP1R17O96001 155 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 P0DMU3 169 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 FAM231AP0DMU4 169 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 FAM231CP0DMU5 169 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 RAB4AP20338 218 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 IFI27P40305 119 aaPredicted RBP1.69□□□□□ -2.14
LINC00888-204ENST00000487386 COTL1Q14019 142 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 CFAP126Q5VTH2 177 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 Q6ZUT4 128 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 FAM19A2Q8N3H0 131 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 DEFB104AQ8WTQ1 72 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 CHCHD1Q96BP2 118 aaKnown RBP1.69□□□□□ -2.14
LINC00888-204ENST00000487386 PRADC1Q9BSG0 188 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 TMEM70Q9BUB7 260 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 ST20Q9HBF5 79 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 HSPB8Q9UJY1 196 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 CYSLTR1Q9Y271 337 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 MXRA5Q9NR99 2828 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 WNK1Q9H4A3 2382 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 MAST4O15021 2626 aa1.69□□□□□ -2.14
LINC00888-204ENST00000487386 FLNBO75369 2602 aaKnown RBP1.69□□□□□ -2.14
LINC00888-204ENST00000487386 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.68□□□□□ -2.14
LINC00888-204ENST00000487386 A0A096LPF7 62 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 A0A0J9YY99 117 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 IGKV2-29A2NJV5 120 aaPredicted RBP1.68□□□□□ -2.14
LINC00888-204ENST00000487386 SMIM9A6NGZ8 99 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 HSBP1L1C9JCN9 74 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 NDUFC2-KCTD14E9PQ53 114 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 F5H768 121 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 ATP5G1P05496 136 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 CRYGDP07320 174 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 TCTAP57738 103 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 Q0VG73 95 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 AMMECR1LQ6DCA0 310 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 CLPSL2Q6UWE3 100 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 ATOH7Q8N100 152 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 Q8N8P6 123 aa1.68□□□□□ -2.14
LINC00888-204ENST00000487386 WFDC9Q8NEX5 89 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms