RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 Q6ZUT4 128 aa6.57□□□□□ -1.36
HMGN1-215ENST00000485550 A0A1B0GVG6 124 aa6.56□□□□□ -1.36
HMGN1-215ENST00000485550 A0A1W2PNN7 141 aa6.56□□□□□ -1.36
HMGN1-215ENST00000485550 PPP1R17O96001 155 aa6.56□□□□□ -1.36
HMGN1-215ENST00000485550 PTTG1IPP53801 180 aa6.56□□□□□ -1.36
HMGN1-215ENST00000485550 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
HMGN1-215ENST00000485550 PKIGQ9Y2B9 76 aa6.56□□□□□ -1.36
HMGN1-215ENST00000485550 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
HMGN1-215ENST00000485550 LOC107984640A0A0U1RRK4 108 aa6.55□□□□□ -1.36
HMGN1-215ENST00000485550 PPP1R2P9O14990 202 aa6.55□□□□□ -1.36
HMGN1-215ENST00000485550 CKS2P33552 79 aa6.55□□□□□ -1.36
HMGN1-215ENST00000485550 RPL39P62891 51 aaKnown RBP6.55□□□□□ -1.36
HMGN1-215ENST00000485550 SMAGPQ0VAQ4 97 aa6.55□□□□□ -1.36
HMGN1-215ENST00000485550 FAM74A3Q4VXF1 159 aa6.55□□□□□ -1.36
HMGN1-215ENST00000485550 MRPL54Q6P161 138 aaKnown RBP6.55□□□□□ -1.36
HMGN1-215ENST00000485550 OPRPNQ99935 248 aaPredicted RBP6.55□□□□□ -1.36
HMGN1-215ENST00000485550 NAT8Q9UHE5 227 aa6.55□□□□□ -1.36
HMGN1-215ENST00000485550 CSDC2Q9Y534 153 aaKnown RBP6.55□□□□□ -1.36
HMGN1-215ENST00000485550 SMIM27A0A1W2PRY6 76 aa6.54□□□□□ -1.36
HMGN1-215ENST00000485550 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
HMGN1-215ENST00000485550 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
HMGN1-215ENST00000485550 Q6ZRP5 223 aa6.54□□□□□ -1.36
HMGN1-215ENST00000485550 TMEM18Q96B42 140 aa6.54□□□□□ -1.36
HMGN1-215ENST00000485550 C20orf78Q9BR46 151 aa6.54□□□□□ -1.36
HMGN1-215ENST00000485550 LINC00862A6NCI5 91 aa6.53□□□□□ -1.36
HMGN1-215ENST00000485550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.53□□□□□ -1.36
HMGN1-215ENST00000485550 TCAPO15273 167 aa6.53□□□□□ -1.36
HMGN1-215ENST00000485550 APOMO95445 188 aa6.53□□□□□ -1.36
HMGN1-215ENST00000485550 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
HMGN1-215ENST00000485550 RPL18AQ02543 176 aaKnown RBP6.53□□□□□ -1.36
HMGN1-215ENST00000485550 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
HMGN1-215ENST00000485550 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGN1-215ENST00000485550 PEA15Q15121 130 aa6.53□□□□□ -1.36
HMGN1-215ENST00000485550 C9orf116Q5BN46 136 aaPredicted RBP6.53□□□□□ -1.36
HMGN1-215ENST00000485550 TRBV24-1A0A075B6N3 115 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 D6R8Y8 96 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 FAM104AQ969W3 186 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 C2orf48Q96LS8 159 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 TIMM21Q9BVV7 248 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
HMGN1-215ENST00000485550 A0A1B0GW15 77 aa6.51□□□□□ -1.37
HMGN1-215ENST00000485550 NPYP01303 97 aa6.51□□□□□ -1.37
HMGN1-215ENST00000485550 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
HMGN1-215ENST00000485550 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
HMGN1-215ENST00000485550 F8W036 122 aa6.5□□□□□ -1.37
HMGN1-215ENST00000485550 RPL32P62910 135 aaKnown RBP6.5□□□□□ -1.37
HMGN1-215ENST00000485550 HBBP68871 147 aa6.5□□□□□ -1.37
HMGN1-215ENST00000485550 C10orf25Q5T742 122 aa6.5□□□□□ -1.37
HMGN1-215ENST00000485550 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
HMGN1-215ENST00000485550 IGHV3OR16-9A0A0B4J2B5 98 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 A0A1B0GXF2 115 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 IFITM10A6NMD0 228 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 MT-ND6P03923 174 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 S100A8P05109 93 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 UNQ6190/PRO20217Q6UXQ8 127 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 OR10D4PQ8NGN7 298 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 SPANXA1Q9NS26 97 aa6.49□□□□□ -1.37
HMGN1-215ENST00000485550 LOC389332A0A1B0GUA5 103 aa6.48□□□□□ -1.37
HMGN1-215ENST00000485550 FAM168BA1KXE4 195 aa6.48□□□□□ -1.37
HMGN1-215ENST00000485550 RAB5AP20339 215 aa6.48□□□□□ -1.37
HMGN1-215ENST00000485550 TMEM136Q6ZRR5 245 aa6.48□□□□□ -1.37
HMGN1-215ENST00000485550 PRELID3AQ96N28 172 aa6.48□□□□□ -1.37
HMGN1-215ENST00000485550 NDUFA1O15239 70 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 PPBPP02775 128 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 LINC00310P59036 64 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 MRPS36P82909 103 aaKnown RBP6.47□□□□□ -1.37
HMGN1-215ENST00000485550 RNF151Q2KHN1 245 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 GAGE2EQ4V326 116 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 ORMDL3Q8N138 153 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 IMMP2LQ96T52 175 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 SMDT1Q9H4I9 107 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 MRPL35Q9NZE8 188 aaKnown RBP6.47□□□□□ -1.37
HMGN1-215ENST00000485550 GAGE2DQ9UEU5 116 aa6.47□□□□□ -1.37
HMGN1-215ENST00000485550 A0A087WZ39 114 aa6.46□□□□□ -1.38
HMGN1-215ENST00000485550 IFI27P40305 119 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-215ENST00000485550 ZC2HC1BQ5TFG8 222 aa6.46□□□□□ -1.38
HMGN1-215ENST00000485550 KRTAP11-1Q8IUC1 163 aa6.46□□□□□ -1.38
HMGN1-215ENST00000485550 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
HMGN1-215ENST00000485550 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
HMGN1-215ENST00000485550 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
HMGN1-215ENST00000485550 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
HMGN1-215ENST00000485550 C2orf82Q6UX34 121 aa6.45□□□□□ -1.38
HMGN1-215ENST00000485550 FAM19A5Q7Z5A7 132 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-215ENST00000485550 MUC2Q02817 5179 aa6.44□□□□□ -1.38
HMGN1-215ENST00000485550 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
HMGN1-215ENST00000485550 ATP5L2Q7Z4Y8 100 aa6.44□□□□□ -1.38
HMGN1-215ENST00000485550 F8WDY8 70 aa6.43□□□□□ -1.38
HMGN1-215ENST00000485550 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
HMGN1-215ENST00000485550 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
HMGN1-215ENST00000485550 TMEM141Q96I45 108 aa6.43□□□□□ -1.38
HMGN1-215ENST00000485550 PYGO1Q9Y3Y4 419 aa6.43□□□□□ -1.38
HMGN1-215ENST00000485550 UBE2D1P51668 147 aa6.42□□□□□ -1.38
HMGN1-215ENST00000485550 TEX43Q6ZNM6 134 aa6.42□□□□□ -1.38
HMGN1-215ENST00000485550 KRTAP7-1Q8IUC3 87 aa6.42□□□□□ -1.38
HMGN1-215ENST00000485550 PRR26Q8N8Z3 221 aa6.42□□□□□ -1.38
HMGN1-215ENST00000485550 MAP1LC3AQ9H492 121 aa6.42□□□□□ -1.38
HMGN1-215ENST00000485550 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms