RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 HYDINQ4G0P3 5121 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 TRAV9-2A0A087WT02 112 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 IGHV3OR16-9A0A0B4J2B5 98 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 TMEM170BQ5T4T1 132 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 KRTAP26-1Q6PEX3 210 aa9.75□□□□□ -0.85
LRIF1-202ENST00000485275 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
LRIF1-202ENST00000485275 CRPP02741 224 aa9.74□□□□□ -0.85
LRIF1-202ENST00000485275 LINC00469Q8N7U9 141 aa9.74□□□□□ -0.85
LRIF1-202ENST00000485275 GEMIN7Q9H840 131 aaKnown RBP9.74□□□□□ -0.85
LRIF1-202ENST00000485275 DNAH6Q9C0G6 4158 aa9.74□□□□□ -0.85
LRIF1-202ENST00000485275 HERVK_113P63121 156 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 IGHV3-64A0A075B6Q5 118 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 TRAV8-3A0A0A6YYJ7 113 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 FOXI1Q12951 378 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 SS18Q15532 418 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 MIAQ16674 131 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 Q9HAA7 133 aa9.73□□□□□ -0.85
LRIF1-202ENST00000485275 SPINK8P0C7L1 97 aa9.72□□□□□ -0.85
LRIF1-202ENST00000485275 SPATA45Q537H7 98 aa9.72□□□□□ -0.85
LRIF1-202ENST00000485275 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.85
LRIF1-202ENST00000485275 TSPEAR-AS2P59090 65 aa9.71□□□□□ -0.85
LRIF1-202ENST00000485275 SEC11AP67812 179 aa9.71□□□□□ -0.85
LRIF1-202ENST00000485275 CD164L2Q6UWJ8 174 aa9.71□□□□□ -0.85
LRIF1-202ENST00000485275 C5orf38Q86SI9 138 aa9.71□□□□□ -0.85
LRIF1-202ENST00000485275 LINC00476Q8WZB0 136 aa9.71□□□□□ -0.85
LRIF1-202ENST00000485275 GAGE12HA6NDE8 117 aa9.7□□□□□ -0.86
LRIF1-202ENST00000485275 TTTY13Q9BZ97 58 aa9.7□□□□□ -0.86
LRIF1-202ENST00000485275 NBDYA0A0U1RRE5 68 aa9.7□□□□□ -0.86
LRIF1-202ENST00000485275 C10orf126Q8N4M7 172 aa9.7□□□□□ -0.86
LRIF1-202ENST00000485275 A0A087WZ39 114 aa9.69□□□□□ -0.86
LRIF1-202ENST00000485275 TRAV8-4A0A0B4J246 113 aa9.69□□□□□ -0.86
LRIF1-202ENST00000485275 E9PLD3 99 aa9.69□□□□□ -0.86
LRIF1-202ENST00000485275 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
LRIF1-202ENST00000485275 IGLV5-39A0A0G2JS06 123 aa9.68□□□□□ -0.86
LRIF1-202ENST00000485275 LY6G6CO95867 125 aa9.68□□□□□ -0.86
LRIF1-202ENST00000485275 S100A12P80511 92 aa9.68□□□□□ -0.86
LRIF1-202ENST00000485275 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
LRIF1-202ENST00000485275 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
LRIF1-202ENST00000485275 IGHV1-58A0A0C4DH39 117 aa9.67□□□□□ -0.86
LRIF1-202ENST00000485275 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
LRIF1-202ENST00000485275 K7EP13 123 aa9.67□□□□□ -0.86
LRIF1-202ENST00000485275 NMUP48645 174 aa9.67□□□□□ -0.86
LRIF1-202ENST00000485275 C1orf43Q9BWL3 253 aa9.67□□□□□ -0.86
LRIF1-202ENST00000485275 PRO1933Q9H354 126 aa9.67□□□□□ -0.86
LRIF1-202ENST00000485275 H3BRM9 83 aa9.66□□□□□ -0.86
LRIF1-202ENST00000485275 M0R2N4 97 aa9.66□□□□□ -0.86
LRIF1-202ENST00000485275 C14orf144Q96I85 54 aa9.66□□□□□ -0.86
LRIF1-202ENST00000485275 COX7A2LO14548 114 aa9.65□□□□□ -0.86
LRIF1-202ENST00000485275 HERVK_113P61574 105 aa9.65□□□□□ -0.87
LRIF1-202ENST00000485275 Q6ZR54 194 aa9.65□□□□□ -0.87
LRIF1-202ENST00000485275 KMT2CQ8NEZ4 4911 aaKnown RBP9.64□□□□□ -0.87
LRIF1-202ENST00000485275 LEPROTO15243 131 aa9.64□□□□□ -0.87
LRIF1-202ENST00000485275 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
LRIF1-202ENST00000485275 J3QQQ9 107 aa9.63□□□□□ -0.87
LRIF1-202ENST00000485275 C15orf56Q8N910 161 aa9.63□□□□□ -0.87
LRIF1-202ENST00000485275 DNAH17Q9UFH2 4485 aa9.63□□□□□ -0.87
LRIF1-202ENST00000485275 COX8AP10176 69 aa9.63□□□□□ -0.87
LRIF1-202ENST00000485275 Q6ZRN7 208 aaPredicted RBP9.63□□□□□ -0.87
LRIF1-202ENST00000485275 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
LRIF1-202ENST00000485275 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
LRIF1-202ENST00000485275 MALP21145 153 aa9.61□□□□□ -0.87
LRIF1-202ENST00000485275 WFDC2Q14508 124 aa9.61□□□□□ -0.87
LRIF1-202ENST00000485275 ORAOV1Q8WV07 137 aa9.61□□□□□ -0.87
LRIF1-202ENST00000485275 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
LRIF1-202ENST00000485275 FRAS1Q86XX4 4008 aa9.61□□□□□ -0.87
LRIF1-202ENST00000485275 BOD1L2Q8IYS8 172 aa9.6□□□□□ -0.87
LRIF1-202ENST00000485275 TOMM7Q9P0U1 55 aa9.6□□□□□ -0.87
LRIF1-202ENST00000485275 COX7B2Q8TF08 81 aa9.6□□□□□ -0.87
LRIF1-202ENST00000485275 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
LRIF1-202ENST00000485275 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
LRIF1-202ENST00000485275 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
LRIF1-202ENST00000485275 ZNF625Q96I27 306 aaPredicted RBP9.59□□□□□ -0.87
LRIF1-202ENST00000485275 RYR2Q92736 4967 aa9.59□□□□□ -0.87
LRIF1-202ENST00000485275 ZNF815PA8K554 130 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 LECT2O14960 151 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 RMI2Q96E14 147 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 MYMXA0A1B0GTQ4 84 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 Q8IZM0 81 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
LRIF1-202ENST00000485275 USP17L23D6RBM5 183 aa9.57□□□□□ -0.88
LRIF1-202ENST00000485275 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
LRIF1-202ENST00000485275 FAT2Q9NYQ8 4349 aa9.57□□□□□ -0.88
LRIF1-202ENST00000485275 NDUFA1O15239 70 aa9.56□□□□□ -0.88
LRIF1-202ENST00000485275 DLEU1O43261 78 aa9.56□□□□□ -0.88
LRIF1-202ENST00000485275 GVQW2A0A096LPI5 108 aaPredicted RBP9.55□□□□□ -0.88
LRIF1-202ENST00000485275 TSTD3H0UI37 97 aa9.55□□□□□ -0.88
LRIF1-202ENST00000485275 APOMO95445 188 aa9.55□□□□□ -0.88
LRIF1-202ENST00000485275 MIEN1Q9BRT3 115 aa9.55□□□□□ -0.88
LRIF1-202ENST00000485275 UQCR10Q9UDW1 63 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms