RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MRPS36P82909 103 aaKnown RBP4.85□□□□□ -1.63
BRCA1-216ENST00000484087 FHL2Q14192 279 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 FAM222AQ5U5X8 452 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 AMMECR1LQ6DCA0 310 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 TMEM101Q96IK0 257 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 CHAC1Q9BUX1 264 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 Q9UF83 564 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 PRO0255Q9UI72 69 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 UBE2D4Q9Y2X8 147 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 DNAH10Q8IVF4 4471 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 DNAH2Q9P225 4427 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 IGLV4-69A0A075B6H9 119 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 H7C423 109 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 FGF6P10767 208 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 SEC11AP67812 179 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 HSD52Q0P140 79 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 NFE4Q86UQ8 179 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 PCP2Q8IVA1 136 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 AMELXQ99217 191 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-216ENST00000484087 HIGD1BQ9P298 99 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 CSDC2Q9Y534 153 aaKnown RBP4.84□□□□□ -1.63
BRCA1-216ENST00000484087 BIRC6Q9NR09 4857 aa4.84□□□□□ -1.63
BRCA1-216ENST00000484087 DNAH6Q9C0G6 4158 aa4.83□□□□□ -1.64
BRCA1-216ENST00000484087 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
BRCA1-216ENST00000484087 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
BRCA1-216ENST00000484087 ATP5G1P05496 136 aa4.83□□□□□ -1.64
BRCA1-216ENST00000484087 MPV17L2Q567V2 206 aa4.83□□□□□ -1.64
BRCA1-216ENST00000484087 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
BRCA1-216ENST00000484087 GEMIN7Q9H840 131 aaKnown RBP4.83□□□□□ -1.64
BRCA1-216ENST00000484087 APLNQ9ULZ1 77 aa4.83□□□□□ -1.64
BRCA1-216ENST00000484087 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-216ENST00000484087 DEFB131BA0A096LNP1 70 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 TRAV10A0A0B4J240 114 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 A0A0J9YXV3 536 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 H3BRM9 83 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 ZNF25P17030 456 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-216ENST00000484087 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
BRCA1-216ENST00000484087 SCGB1D4Q6XE38 83 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 Q6ZUT4 128 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 C2orf91Q6ZV80 131 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 ATP6V0E2Q8NHE4 81 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 PLEKHB2Q96CS7 222 aa4.82□□□□□ -1.64
BRCA1-216ENST00000484087 KLK5Q9Y337 293 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-216ENST00000484087 TRBV6-8A0A0A6YYG3 113 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 LOC100131303A0A0U1RQF7 123 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 A6NDN8 102 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 ZNF815PA8K554 130 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 LEPROTO15243 131 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 ZNF22P17026 224 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-216ENST00000484087 TAL2Q16559 108 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 BVES-AS1Q5T3Y7 98 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 NTM-AS1Q6ZSK4 140 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 SH2D6Q7Z4S9 175 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 CHCHD5Q9BSY4 110 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 A0A1B0GV90 55 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 TMEM223A0PJW6 202 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 TIRAPP58753 221 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 HERVK_113P63121 156 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 RNASE13Q5GAN3 156 aaKnown RBP4.81□□□□□ -1.64
BRCA1-216ENST00000484087 LINC00469Q8N7U9 141 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 ORAOV1Q8WV07 137 aa4.81□□□□□ -1.64
BRCA1-216ENST00000484087 FAT2Q9NYQ8 4349 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 F5H768 121 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 J3QQQ9 107 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 LINC00694P0DN24 101 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 GCSHP23434 173 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 UBE2D1P51668 147 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 PTTG1IPP53801 180 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 GAGE6Q13070 117 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 CFAP161Q6P656 301 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 MAPKAPK5-AS1Q8N8E1 139 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 TTTY13Q9BZ97 58 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 CDC42SE2Q9NRR3 84 aa4.8□□□□□ -1.64
BRCA1-216ENST00000484087 HECTD4Q9Y4D8 3996 aa4.79□□□□□ -1.64
BRCA1-216ENST00000484087 TRAV26-1A0A087WT03 109 aa4.79□□□□□ -1.64
BRCA1-216ENST00000484087 IGHV1-58A0A0C4DH39 117 aa4.79□□□□□ -1.64
BRCA1-216ENST00000484087 A0A0J9YY99 117 aa4.79□□□□□ -1.64
BRCA1-216ENST00000484087 TMEM262E9PQX1 116 aa4.79□□□□□ -1.64
BRCA1-216ENST00000484087 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
BRCA1-216ENST00000484087 MRPL23Q16540 153 aaKnown RBP4.79□□□□□ -1.64
BRCA1-216ENST00000484087 ICOSQ9Y6W8 199 aa4.79□□□□□ -1.64
BRCA1-216ENST00000484087 TRAV13-1A0A0B4J241 112 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 B5MCH6 92 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 M0R2N4 97 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 CEND1Q8N111 149 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 FAM104AQ969W3 186 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 VSIG2Q96IQ7 327 aa4.78□□□□□ -1.64
BRCA1-216ENST00000484087 IGHV3-64A0A075B6Q5 118 aa4.77□□□□□ -1.65
BRCA1-216ENST00000484087 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
BRCA1-216ENST00000484087 SMIM13P0DJ93 91 aa4.77□□□□□ -1.65
BRCA1-216ENST00000484087 IGHV3-30-3P0DP02 117 aa4.77□□□□□ -1.65
BRCA1-216ENST00000484087 TM2D2Q9BX73 214 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms