RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 NMUP48645 174 aa6.83□□□□□ -1.32
HDAC6-226ENST00000483656 SEC11AP67812 179 aa6.83□□□□□ -1.32
HDAC6-226ENST00000483656 REG3AQ06141 175 aa6.83□□□□□ -1.32
HDAC6-226ENST00000483656 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
HDAC6-226ENST00000483656 BOD1L2Q8IYS8 172 aa6.83□□□□□ -1.32
HDAC6-226ENST00000483656 UQCR10Q9UDW1 63 aa6.83□□□□□ -1.32
HDAC6-226ENST00000483656 TRAV8-3A0A0A6YYJ7 113 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 LEPROTO15243 131 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 CCL25O15444 150 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 DLEU1O43261 78 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 DDTP30046 118 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 CCL18P55774 89 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 SLC25A34Q6PIV7 304 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 UPK3BQ9BT76 320 aa6.82□□□□□ -1.32
HDAC6-226ENST00000483656 IGHV3-64A0A075B6Q5 118 aa6.81□□□□□ -1.32
HDAC6-226ENST00000483656 IGHV1-58A0A0C4DH39 117 aa6.81□□□□□ -1.32
HDAC6-226ENST00000483656 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
HDAC6-226ENST00000483656 HERVK_113P61574 105 aa6.81□□□□□ -1.32
HDAC6-226ENST00000483656 SS18Q15532 418 aa6.81□□□□□ -1.32
HDAC6-226ENST00000483656 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
HDAC6-226ENST00000483656 TENM2Q9NT68 2774 aa6.81□□□□□ -1.32
HDAC6-226ENST00000483656 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
HDAC6-226ENST00000483656 IGLV10-54A0A075B6I4 117 aa6.8□□□□□ -1.32
HDAC6-226ENST00000483656 LINC00587B1AMM8 73 aa6.8□□□□□ -1.32
HDAC6-226ENST00000483656 SMIM1B2RUZ4 78 aa6.8□□□□□ -1.32
HDAC6-226ENST00000483656 H3BRM9 83 aa6.8□□□□□ -1.32
HDAC6-226ENST00000483656 XCL1P47992 114 aa6.8□□□□□ -1.32
HDAC6-226ENST00000483656 ZFAND6Q6FIF0 208 aa6.8□□□□□ -1.32
HDAC6-226ENST00000483656 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-226ENST00000483656 KLK5Q9Y337 293 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-226ENST00000483656 A0A087WZ39 114 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 J3QQQ9 107 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 SIVA1O15304 175 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 FOXI1Q12951 378 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 KRTAP26-1Q6PEX3 210 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 CD164L2Q6UWJ8 174 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 UBE2WQ96B02 151 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 PLEKHB2Q96CS7 222 aa6.79□□□□□ -1.32
HDAC6-226ENST00000483656 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
HDAC6-226ENST00000483656 GAGE12HA6NDE8 117 aa6.78□□□□□ -1.32
HDAC6-226ENST00000483656 LYSTQ99698 3801 aa6.78□□□□□ -1.32
HDAC6-226ENST00000483656 IBA57-AS1B1ANH7 110 aa6.77□□□□□ -1.33
HDAC6-226ENST00000483656 HNRNPA3P51991 378 aaKnown RBP6.77□□□□□ -1.33
HDAC6-226ENST00000483656 CTAG1AP78358 180 aa6.77□□□□□ -1.33
HDAC6-226ENST00000483656 LINC01561Q8N1V8 128 aa6.77□□□□□ -1.33
HDAC6-226ENST00000483656 Q9H8V8 135 aa6.77□□□□□ -1.33
HDAC6-226ENST00000483656 RYR3Q15413 4870 aa6.77□□□□□ -1.33
HDAC6-226ENST00000483656 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
HDAC6-226ENST00000483656 DNAH6Q9C0G6 4158 aa6.76□□□□□ -1.33
HDAC6-226ENST00000483656 TRAV8-4A0A0B4J246 113 aa6.76□□□□□ -1.33
HDAC6-226ENST00000483656 ZNF815PA8K554 130 aa6.76□□□□□ -1.33
HDAC6-226ENST00000483656 CRPP02741 224 aa6.76□□□□□ -1.33
HDAC6-226ENST00000483656 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
HDAC6-226ENST00000483656 MIAQ16674 131 aa6.76□□□□□ -1.33
HDAC6-226ENST00000483656 MUC7Q8TAX7 377 aa6.76□□□□□ -1.33
HDAC6-226ENST00000483656 COX7A2LO14548 114 aa6.75□□□□□ -1.33
HDAC6-226ENST00000483656 UBE2DNLQ8IWF7 75 aa6.75□□□□□ -1.33
HDAC6-226ENST00000483656 C10orf126Q8N4M7 172 aa6.75□□□□□ -1.33
HDAC6-226ENST00000483656 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
HDAC6-226ENST00000483656 HIGD1BQ9P298 99 aa6.75□□□□□ -1.33
HDAC6-226ENST00000483656 COX7B2Q8TF08 81 aa6.74□□□□□ -1.33
HDAC6-226ENST00000483656 WWC2-AS2Q96NR7 200 aa6.74□□□□□ -1.33
HDAC6-226ENST00000483656 NDUFA12Q9UI09 145 aa6.74□□□□□ -1.33
HDAC6-226ENST00000483656 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
HDAC6-226ENST00000483656 A0A0J9YXY3 114 aa6.73□□□□□ -1.33
HDAC6-226ENST00000483656 NDUFA1O15239 70 aa6.73□□□□□ -1.33
HDAC6-226ENST00000483656 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
HDAC6-226ENST00000483656 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-226ENST00000483656 Q9HAA7 133 aa6.73□□□□□ -1.33
HDAC6-226ENST00000483656 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
HDAC6-226ENST00000483656 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
HDAC6-226ENST00000483656 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
HDAC6-226ENST00000483656 DNAH2Q9P225 4427 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 EREGO14944 169 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 MALP21145 153 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 CASC10Q5T4H9 136 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 Q8IZM0 81 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 ORAOV1Q8WV07 137 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 LITAFQ99732 161 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 SNHG12Q9BXW3 62 aa6.71□□□□□ -1.34
HDAC6-226ENST00000483656 K7EP13 123 aa6.7□□□□□ -1.34
HDAC6-226ENST00000483656 HINT1P49773 126 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-226ENST00000483656 HSD52Q0P140 79 aa6.7□□□□□ -1.34
HDAC6-226ENST00000483656 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
HDAC6-226ENST00000483656 SCGB1D4Q6XE38 83 aa6.7□□□□□ -1.34
HDAC6-226ENST00000483656 C15orf56Q8N910 161 aa6.7□□□□□ -1.34
HDAC6-226ENST00000483656 NBDYA0A0U1RRE5 68 aa6.69□□□□□ -1.34
HDAC6-226ENST00000483656 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
HDAC6-226ENST00000483656 BVES-AS1Q5T3Y7 98 aa6.69□□□□□ -1.34
HDAC6-226ENST00000483656 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
HDAC6-226ENST00000483656 C6orf223Q8N319 242 aa6.69□□□□□ -1.34
HDAC6-226ENST00000483656 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
HDAC6-226ENST00000483656 SPANXB1Q9NS25 103 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-226ENST00000483656 M0R143 59 aa6.68□□□□□ -1.34
HDAC6-226ENST00000483656 APOMO95445 188 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms