RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LOC107984640A0A0U1RRK4 108 aa8.54□□□□□ -1.04
VARS-226ENST00000483275 CD164L2Q6UWJ8 174 aa8.54□□□□□ -1.04
VARS-226ENST00000483275 TMEM136Q6ZRR5 245 aa8.54□□□□□ -1.04
VARS-226ENST00000483275 ZNF664Q8N3J9 261 aa8.54□□□□□ -1.04
VARS-226ENST00000483275 TRBV24-1A0A075B6N3 115 aa8.53□□□□□ -1.04
VARS-226ENST00000483275 MALP21145 153 aa8.53□□□□□ -1.04
VARS-226ENST00000483275 RPL18AQ02543 176 aaKnown RBP8.53□□□□□ -1.04
VARS-226ENST00000483275 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
VARS-226ENST00000483275 PRELID3AQ96N28 172 aa8.53□□□□□ -1.04
VARS-226ENST00000483275 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
VARS-226ENST00000483275 PKIGQ9Y2B9 76 aa8.53□□□□□ -1.04
VARS-226ENST00000483275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.52□□□□□ -1.05
VARS-226ENST00000483275 MT-ND6P03923 174 aa8.52□□□□□ -1.05
VARS-226ENST00000483275 RPL32P62910 135 aaKnown RBP8.52□□□□□ -1.05
VARS-226ENST00000483275 NDUFA5Q16718 116 aa8.52□□□□□ -1.05
VARS-226ENST00000483275 PHF5AQ7RTV0 110 aaKnown RBP8.52□□□□□ -1.05
VARS-226ENST00000483275 CAMK2N2Q96S95 79 aa8.52□□□□□ -1.05
VARS-226ENST00000483275 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
VARS-226ENST00000483275 SMIM2Q9BVW6 85 aa8.52□□□□□ -1.05
VARS-226ENST00000483275 TRAV9-1A0A075B6T8 112 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 COX7A2LO14548 114 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 NPYP01303 97 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 RAB5AP20339 215 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 RHEBQ15382 184 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
VARS-226ENST00000483275 Q6ZUT4 128 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 C5orf38Q86SI9 138 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 RPS10P5Q9NQ39 176 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 LAMTOR2Q9Y2Q5 125 aa8.51□□□□□ -1.05
VARS-226ENST00000483275 APOMO95445 188 aa8.5□□□□□ -1.05
VARS-226ENST00000483275 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
VARS-226ENST00000483275 MAP1LC3AQ9H492 121 aa8.5□□□□□ -1.05
VARS-226ENST00000483275 CARHSP1Q9Y2V2 147 aaKnown RBP8.5□□□□□ -1.05
VARS-226ENST00000483275 SPAG11BQ08648 103 aa8.49□□□□□ -1.05
VARS-226ENST00000483275 C10orf91Q5T1B1 145 aa8.49□□□□□ -1.05
VARS-226ENST00000483275 UBE2D4Q9Y2X8 147 aa8.49□□□□□ -1.05
VARS-226ENST00000483275 LOC389332A0A1B0GUA5 103 aa8.48□□□□□ -1.05
VARS-226ENST00000483275 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
VARS-226ENST00000483275 C1orf196B1AJZ1 125 aa8.48□□□□□ -1.05
VARS-226ENST00000483275 APOC3P02656 99 aa8.48□□□□□ -1.05
VARS-226ENST00000483275 KRTAP11-1Q8IUC1 163 aa8.48□□□□□ -1.05
VARS-226ENST00000483275 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
VARS-226ENST00000483275 COX19Q49B96 90 aa8.47□□□□□ -1.05
VARS-226ENST00000483275 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
VARS-226ENST00000483275 SNAPINO95295 136 aa8.46□□□□□ -1.06
VARS-226ENST00000483275 SVBPQ8N300 66 aa8.46□□□□□ -1.06
VARS-226ENST00000483275 TIMM21Q9BVV7 248 aa8.46□□□□□ -1.06
VARS-226ENST00000483275 PRSS47A8MTI9 375 aa8.45□□□□□ -1.06
VARS-226ENST00000483275 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
VARS-226ENST00000483275 FAM19A5Q7Z5A7 132 aaPredicted RBP8.45□□□□□ -1.06
VARS-226ENST00000483275 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
VARS-226ENST00000483275 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
VARS-226ENST00000483275 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
VARS-226ENST00000483275 Q8N8P6 123 aa8.44□□□□□ -1.06
VARS-226ENST00000483275 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
VARS-226ENST00000483275 C2orf48Q96LS8 159 aa8.44□□□□□ -1.06
VARS-226ENST00000483275 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
VARS-226ENST00000483275 SPANXA1Q9NS26 97 aa8.44□□□□□ -1.06
VARS-226ENST00000483275 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
VARS-226ENST00000483275 KIAA1644Q3SXP7 199 aa8.43□□□□□ -1.06
VARS-226ENST00000483275 ORMDL2Q53FV1 153 aa8.43□□□□□ -1.06
VARS-226ENST00000483275 A0A087WZ39 114 aa8.42□□□□□ -1.06
VARS-226ENST00000483275 K7EMI3 77 aa8.42□□□□□ -1.06
VARS-226ENST00000483275 G0S2P27469 103 aa8.42□□□□□ -1.06
VARS-226ENST00000483275 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
VARS-226ENST00000483275 FABP9Q0Z7S8 132 aa8.41□□□□□ -1.06
VARS-226ENST00000483275 UNQ6190/PRO20217Q6UXQ8 127 aa8.41□□□□□ -1.06
VARS-226ENST00000483275 DIRC1Q969H9 104 aa8.41□□□□□ -1.06
VARS-226ENST00000483275 MRPL18Q9H0U6 180 aaKnown RBP8.41□□□□□ -1.06
VARS-226ENST00000483275 CYSLTR1Q9Y271 337 aa8.41□□□□□ -1.06
VARS-226ENST00000483275 H0Y9J4 135 aa8.4□□□□□ -1.06
VARS-226ENST00000483275 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.06
VARS-226ENST00000483275 GAGE2EQ4V326 116 aa8.4□□□□□ -1.06
VARS-226ENST00000483275 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
VARS-226ENST00000483275 OR10D4PQ8NGN7 298 aa8.4□□□□□ -1.06
VARS-226ENST00000483275 C6orf48Q9UBA6 75 aa8.4□□□□□ -1.06
VARS-226ENST00000483275 GAGE2DQ9UEU5 116 aa8.4□□□□□ -1.06
VARS-226ENST00000483275 MUC2Q02817 5179 aa8.39□□□□□ -1.07
VARS-226ENST00000483275 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
VARS-226ENST00000483275 C2orf66Q6UXQ4 117 aa8.39□□□□□ -1.07
VARS-226ENST00000483275 Q6ZN92 141 aa8.39□□□□□ -1.07
VARS-226ENST00000483275 MRPL35Q9NZE8 188 aaKnown RBP8.39□□□□□ -1.07
VARS-226ENST00000483275 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
VARS-226ENST00000483275 TGIF2-C20orf24A0A0A6YYL0 155 aa8.38□□□□□ -1.07
VARS-226ENST00000483275 IGHV3OR16-9A0A0B4J2B5 98 aa8.38□□□□□ -1.07
VARS-226ENST00000483275 NDUFA1O15239 70 aa8.38□□□□□ -1.07
VARS-226ENST00000483275 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
VARS-226ENST00000483275 TMEM141Q96I45 108 aa8.38□□□□□ -1.07
VARS-226ENST00000483275 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
VARS-226ENST00000483275 TRAPPC1Q9Y5R8 145 aa8.38□□□□□ -1.07
VARS-226ENST00000483275 M0QXV9 152 aa8.37□□□□□ -1.07
VARS-226ENST00000483275 KRTAP1-4P0C5Y4 121 aa8.37□□□□□ -1.07
VARS-226ENST00000483275 TEX43Q6ZNM6 134 aa8.37□□□□□ -1.07
VARS-226ENST00000483275 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
VARS-226ENST00000483275 SMCO4Q9NRQ5 59 aa8.37□□□□□ -1.07
VARS-226ENST00000483275 PRR4Q16378 134 aa8.36□□□□□ -1.07
VARS-226ENST00000483275 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
VARS-226ENST00000483275 FA2HQ7L5A8 372 aa8.36□□□□□ -1.07
VARS-226ENST00000483275 IGLV4-3A0A075B6K6 122 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms