RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 MAJINQ3KP22 176 aa7.54□□□□□ -1.2
HMGN1-213ENST00000482192 C5orf38Q86SI9 138 aa7.54□□□□□ -1.2
HMGN1-213ENST00000482192 LINC00474Q9P2X8 69 aa7.54□□□□□ -1.2
HMGN1-213ENST00000482192 A0A096LNI7 61 aa7.53□□□□□ -1.2
HMGN1-213ENST00000482192 IGHV3OR16-9A0A0B4J2B5 98 aa7.53□□□□□ -1.2
HMGN1-213ENST00000482192 J3QL48 77 aa7.53□□□□□ -1.2
HMGN1-213ENST00000482192 ORMDL2Q53FV1 153 aa7.53□□□□□ -1.2
HMGN1-213ENST00000482192 OR10D4PQ8NGN7 298 aa7.53□□□□□ -1.2
HMGN1-213ENST00000482192 CAMK2N2Q96S95 79 aa7.53□□□□□ -1.2
HMGN1-213ENST00000482192 NXT2Q9NPJ8 142 aaKnown RBP7.53□□□□□ -1.2
HMGN1-213ENST00000482192 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
HMGN1-213ENST00000482192 IGLV4-3A0A075B6K6 122 aa7.52□□□□□ -1.21
HMGN1-213ENST00000482192 KRTAP29-1A8MX34 341 aaPredicted RBP7.52□□□□□ -1.21
HMGN1-213ENST00000482192 SPAG11BQ08648 103 aa7.52□□□□□ -1.21
HMGN1-213ENST00000482192 C2orf66Q6UXQ4 117 aa7.52□□□□□ -1.21
HMGN1-213ENST00000482192 STPG4Q8N801 248 aa7.52□□□□□ -1.21
HMGN1-213ENST00000482192 TMEM141Q96I45 108 aa7.52□□□□□ -1.21
HMGN1-213ENST00000482192 C2orf48Q96LS8 159 aa7.52□□□□□ -1.21
HMGN1-213ENST00000482192 TGIF2-C20orf24A0A0A6YYL0 155 aa7.51□□□□□ -1.21
HMGN1-213ENST00000482192 C10orf91Q5T1B1 145 aa7.51□□□□□ -1.21
HMGN1-213ENST00000482192 LCE2AQ5TA79 106 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-213ENST00000482192 Q6ZN92 141 aa7.51□□□□□ -1.21
HMGN1-213ENST00000482192 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
HMGN1-213ENST00000482192 Q6ZRU5 148 aa7.51□□□□□ -1.21
HMGN1-213ENST00000482192 C7orf33Q8WU49 177 aa7.51□□□□□ -1.21
HMGN1-213ENST00000482192 C2orf88Q9BSF0 95 aa7.51□□□□□ -1.21
HMGN1-213ENST00000482192 LOC107984640A0A0U1RRK4 108 aa7.5□□□□□ -1.21
HMGN1-213ENST00000482192 NPSP0C0P6 89 aa7.5□□□□□ -1.21
HMGN1-213ENST00000482192 G0S2P27469 103 aa7.5□□□□□ -1.21
HMGN1-213ENST00000482192 RHEBQ15382 184 aa7.5□□□□□ -1.21
HMGN1-213ENST00000482192 ORAOV1Q8WV07 137 aa7.5□□□□□ -1.21
HMGN1-213ENST00000482192 GNB1LQ9BYB4 327 aa7.5□□□□□ -1.21
HMGN1-213ENST00000482192 CARHSP1Q9Y2V2 147 aaKnown RBP7.5□□□□□ -1.21
HMGN1-213ENST00000482192 F8WDY8 70 aa7.49□□□□□ -1.21
HMGN1-213ENST00000482192 PTTG1IPP53801 180 aa7.49□□□□□ -1.21
HMGN1-213ENST00000482192 KIAA1644Q3SXP7 199 aa7.49□□□□□ -1.21
HMGN1-213ENST00000482192 COX19Q49B96 90 aa7.49□□□□□ -1.21
HMGN1-213ENST00000482192 LINC00242Q5T6M2 205 aa7.49□□□□□ -1.21
HMGN1-213ENST00000482192 FLG2Q5D862 2391 aaPredicted RBP7.49□□□□□ -1.21
HMGN1-213ENST00000482192 A0A087WZ39 114 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 IGIPA6NJ69 53 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 OXTP01178 125 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 MT-ND6P03923 174 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 UBE2D1P51668 147 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
HMGN1-213ENST00000482192 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 RNF151Q2KHN1 245 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 PAPPA-AS1Q5QFB9 102 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 VCX2Q9H322 139 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 RPS10P5Q9NQ39 176 aa7.48□□□□□ -1.21
HMGN1-213ENST00000482192 DMBT1Q9UGM3 2413 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-213ENST00000482192 NDUFA1O15239 70 aa7.47□□□□□ -1.21
HMGN1-213ENST00000482192 AMELXQ99217 191 aa7.47□□□□□ -1.21
HMGN1-213ENST00000482192 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
HMGN1-213ENST00000482192 VPS13BQ7Z7G8 4022 aa7.47□□□□□ -1.21
HMGN1-213ENST00000482192 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.46□□□□□ -1.22
HMGN1-213ENST00000482192 RPL18AQ02543 176 aaKnown RBP7.46□□□□□ -1.22
HMGN1-213ENST00000482192 LINC00173Q6ZV60 143 aa7.46□□□□□ -1.22
HMGN1-213ENST00000482192 TOMM6Q96B49 74 aa7.46□□□□□ -1.22
HMGN1-213ENST00000482192 TIMM17AQ99595 171 aa7.46□□□□□ -1.22
HMGN1-213ENST00000482192 ALKBH7Q9BT30 221 aaPredicted RBP7.46□□□□□ -1.22
HMGN1-213ENST00000482192 MYCBP2O75592 4640 aa7.45□□□□□ -1.22
HMGN1-213ENST00000482192 PRR3P79522 188 aaKnown RBP7.45□□□□□ -1.22
HMGN1-213ENST00000482192 ZC2HC1BQ5TFG8 222 aa7.45□□□□□ -1.22
HMGN1-213ENST00000482192 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
HMGN1-213ENST00000482192 MRPL18Q9H0U6 180 aaKnown RBP7.45□□□□□ -1.22
HMGN1-213ENST00000482192 A0A0J9YXV3 536 aa7.44□□□□□ -1.22
HMGN1-213ENST00000482192 LINC01546A6NGU7 62 aa7.44□□□□□ -1.22
HMGN1-213ENST00000482192 LINC01549A6NIU2 74 aa7.44□□□□□ -1.22
HMGN1-213ENST00000482192 SEC11AP67812 179 aa7.44□□□□□ -1.22
HMGN1-213ENST00000482192 NDUFA5Q16718 116 aa7.44□□□□□ -1.22
HMGN1-213ENST00000482192 ERASQ7Z444 233 aa7.44□□□□□ -1.22
HMGN1-213ENST00000482192 FAM19A3Q7Z5A8 133 aa7.44□□□□□ -1.22
HMGN1-213ENST00000482192 APOC3P02656 99 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-213ENST00000482192 HERVK_113P63121 156 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 FABP9Q0Z7S8 132 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 C10orf25Q5T742 122 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 UNQ6190/PRO20217Q6UXQ8 127 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 SVBPQ8N300 66 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 C6orf48Q9UBA6 75 aa7.43□□□□□ -1.22
HMGN1-213ENST00000482192 SNAPINO95295 136 aa7.42□□□□□ -1.22
HMGN1-213ENST00000482192 TLX1NBP0CAT3 122 aa7.42□□□□□ -1.22
HMGN1-213ENST00000482192 C9orf116Q5BN46 136 aaPredicted RBP7.42□□□□□ -1.22
HMGN1-213ENST00000482192 FA2HQ7L5A8 372 aa7.42□□□□□ -1.22
HMGN1-213ENST00000482192 GEMIN7Q9H840 131 aaKnown RBP7.42□□□□□ -1.22
HMGN1-213ENST00000482192 SMCO4Q9NRQ5 59 aa7.42□□□□□ -1.22
HMGN1-213ENST00000482192 TRBV30A0A0K0K1B3 111 aa7.41□□□□□ -1.22
HMGN1-213ENST00000482192 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
HMGN1-213ENST00000482192 PRSS2P07478 247 aa7.41□□□□□ -1.22
HMGN1-213ENST00000482192 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
HMGN1-213ENST00000482192 Q6ZRP5 223 aa7.4□□□□□ -1.22
HMGN1-213ENST00000482192 PACRGQ96M98 296 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-213ENST00000482192 CDKN2A-AS1Q9UH64 79 aa7.4□□□□□ -1.22
HMGN1-213ENST00000482192 TRAPPC1Q9Y5R8 145 aa7.4□□□□□ -1.22
HMGN1-213ENST00000482192 CKS1BP61024 79 aa7.39□□□□□ -1.23
HMGN1-213ENST00000482192 Q8IZM0 81 aa7.39□□□□□ -1.23
HMGN1-213ENST00000482192 TOMM7Q9P0U1 55 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms