RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 PAPPA-AS1Q5QFB9 102 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 ZC2HC1BQ5TFG8 222 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 CLPSL2Q6UWE3 100 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 FAM19A3Q7Z5A8 133 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 MAPKAPK5-AS1Q8N8E1 139 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 TM2D2Q9BX73 214 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 VCX2Q9H322 139 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 Q9HAA7 133 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 COX11Q9Y6N1 276 aa6.37□□□□□ -1.39
CD46-214ENST00000480003 PRSS29PA6NIE9 313 aa6.36□□□□□ -1.39
CD46-214ENST00000480003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.36□□□□□ -1.39
CD46-214ENST00000480003 ATP5LO75964 103 aa6.36□□□□□ -1.39
CD46-214ENST00000480003 TEX43Q6ZNM6 134 aa6.36□□□□□ -1.39
CD46-214ENST00000480003 BAALCQ8WXS3 180 aa6.36□□□□□ -1.39
CD46-214ENST00000480003 CHCHD10Q8WYQ3 142 aaPredicted RBP6.36□□□□□ -1.39
CD46-214ENST00000480003 RMI2Q96E14 147 aa6.36□□□□□ -1.39
CD46-214ENST00000480003 CST9LQ9H4G1 147 aa6.36□□□□□ -1.39
CD46-214ENST00000480003 IGLV10-54A0A075B6I4 117 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 TRAV13-1A0A0B4J241 112 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 IGKV3OR2-268A0A0C4DH90 116 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 LRCOL1A6NCL2 159 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 LEPROTL1O95214 131 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 UBE2D1P51668 147 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 PMVKQ15126 192 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 SS18Q15532 418 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 LINC00242Q5T6M2 205 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 C1orf43Q9BWL3 253 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
CD46-214ENST00000480003 COX6A2Q02221 97 aa6.34□□□□□ -1.39
CD46-214ENST00000480003 FOXI1Q12951 378 aa6.34□□□□□ -1.39
CD46-214ENST00000480003 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.39
CD46-214ENST00000480003 Q6ZN92 141 aa6.34□□□□□ -1.39
CD46-214ENST00000480003 PACRGQ96M98 296 aaPredicted RBP6.34□□□□□ -1.39
CD46-214ENST00000480003 TRAV12-1A0A0B4J245 112 aa6.33□□□□□ -1.4
CD46-214ENST00000480003 IGHV3OR16-9A0A0B4J2B5 98 aa6.33□□□□□ -1.4
CD46-214ENST00000480003 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
CD46-214ENST00000480003 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
CD46-214ENST00000480003 IFITM10A6NMD0 228 aa6.33□□□□□ -1.4
CD46-214ENST00000480003 FABP4P15090 132 aa6.33□□□□□ -1.4
CD46-214ENST00000480003 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
CD46-214ENST00000480003 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
CD46-214ENST00000480003 A0A0J9YXV3 536 aa6.32□□□□□ -1.4
CD46-214ENST00000480003 PRSS1P07477 247 aa6.32□□□□□ -1.4
CD46-214ENST00000480003 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
CD46-214ENST00000480003 LINC00336Q6ZUF6 198 aa6.32□□□□□ -1.4
CD46-214ENST00000480003 HIST3H2BBQ8N257 126 aa6.32□□□□□ -1.4
CD46-214ENST00000480003 C2orf88Q9BSF0 95 aa6.32□□□□□ -1.4
CD46-214ENST00000480003 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
CD46-214ENST00000480003 TINCRA0A1B0GVN0 87 aa6.31□□□□□ -1.4
CD46-214ENST00000480003 S100A6P06703 90 aa6.31□□□□□ -1.4
CD46-214ENST00000480003 IGLC3P0DOY3 106 aa6.31□□□□□ -1.4
CD46-214ENST00000480003 XCL1P47992 114 aa6.31□□□□□ -1.4
CD46-214ENST00000480003 SEC11AP67812 179 aa6.31□□□□□ -1.4
CD46-214ENST00000480003 WFDC2Q14508 124 aa6.31□□□□□ -1.4
CD46-214ENST00000480003 SPATA12Q7Z6I5 190 aa6.31□□□□□ -1.4
CD46-214ENST00000480003 DNAH11Q96DT5 4516 aa6.3□□□□□ -1.4
CD46-214ENST00000480003 IGLV4-69A0A075B6H9 119 aa6.3□□□□□ -1.4
CD46-214ENST00000480003 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
CD46-214ENST00000480003 A0A087WTM6 91 aa6.3□□□□□ -1.4
CD46-214ENST00000480003 PSCAO43653 123 aa6.3□□□□□ -1.4
CD46-214ENST00000480003 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
CD46-214ENST00000480003 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
CD46-214ENST00000480003 A0A087WZ39 114 aa6.29□□□□□ -1.4
CD46-214ENST00000480003 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
CD46-214ENST00000480003 HERVK_113P63121 156 aa6.29□□□□□ -1.4
CD46-214ENST00000480003 ODF1Q14990 250 aa6.29□□□□□ -1.4
CD46-214ENST00000480003 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
CD46-214ENST00000480003 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
CD46-214ENST00000480003 CHTOPQ9Y3Y2 248 aaKnown RBP6.29□□□□□ -1.4
CD46-214ENST00000480003 USP17L23D6RBM5 183 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 COX7A2LO14548 114 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 C3orf79P0CE67 100 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 PET117Q6UWS5 81 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
CD46-214ENST00000480003 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
CD46-214ENST00000480003 IGHV1-58A0A0C4DH39 117 aa6.27□□□□□ -1.41
CD46-214ENST00000480003 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
CD46-214ENST00000480003 F8VRH5 84 aa6.27□□□□□ -1.41
CD46-214ENST00000480003 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
CD46-214ENST00000480003 GEMIN7Q9H840 131 aaKnown RBP6.27□□□□□ -1.41
CD46-214ENST00000480003 IGHV3-64A0A075B6Q5 118 aa6.26□□□□□ -1.41
CD46-214ENST00000480003 LECT2O14960 151 aa6.26□□□□□ -1.41
CD46-214ENST00000480003 SLPIP03973 132 aa6.26□□□□□ -1.41
CD46-214ENST00000480003 S100A2P29034 98 aa6.26□□□□□ -1.41
CD46-214ENST00000480003 KIAA0087Q14695 138 aa6.26□□□□□ -1.41
CD46-214ENST00000480003 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
CD46-214ENST00000480003 Q8N814 137 aa6.26□□□□□ -1.41
CD46-214ENST00000480003 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
CD46-214ENST00000480003 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
CD46-214ENST00000480003 MALP21145 153 aa6.25□□□□□ -1.41
CD46-214ENST00000480003 C14orf177Q52M58 125 aa6.25□□□□□ -1.41
CD46-214ENST00000480003 LINC00469Q8N7U9 141 aa6.25□□□□□ -1.41
CD46-214ENST00000480003 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms