RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 TSPAN13O95857 204 aa6.55□□□□□ -1.36
HDLBP-237ENST00000479169 RPL13AP40429 203 aaKnown RBP6.55□□□□□ -1.36
HDLBP-237ENST00000479169 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
HDLBP-237ENST00000479169 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
HDLBP-237ENST00000479169 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
HDLBP-237ENST00000479169 F8WDY8 70 aa6.53□□□□□ -1.36
HDLBP-237ENST00000479169 RIGQ13278 110 aa6.53□□□□□ -1.36
HDLBP-237ENST00000479169 TMEM241Q24JQ0 296 aa6.53□□□□□ -1.36
HDLBP-237ENST00000479169 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
HDLBP-237ENST00000479169 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
HDLBP-237ENST00000479169 SLC51BQ86UW2 128 aa6.53□□□□□ -1.36
HDLBP-237ENST00000479169 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
HDLBP-237ENST00000479169 IFITM10A6NMD0 228 aa6.52□□□□□ -1.37
HDLBP-237ENST00000479169 PPP1R2P9O14990 202 aa6.52□□□□□ -1.37
HDLBP-237ENST00000479169 PPP1R17O96001 155 aa6.52□□□□□ -1.37
HDLBP-237ENST00000479169 KIAA0087Q14695 138 aa6.52□□□□□ -1.37
HDLBP-237ENST00000479169 C9orf129Q5T035 196 aaKnown RBP6.52□□□□□ -1.37
HDLBP-237ENST00000479169 SMIM7Q9BQ49 75 aa6.52□□□□□ -1.37
HDLBP-237ENST00000479169 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
HDLBP-237ENST00000479169 C2orf82Q6UX34 121 aa6.51□□□□□ -1.37
HDLBP-237ENST00000479169 OSTCQ9NRP0 149 aa6.51□□□□□ -1.37
HDLBP-237ENST00000479169 CARHSP1Q9Y2V2 147 aaKnown RBP6.51□□□□□ -1.37
HDLBP-237ENST00000479169 V9GYV3 84 aa6.51□□□□□ -1.37
HDLBP-237ENST00000479169 ZNF861PO60384 105 aa6.5□□□□□ -1.37
HDLBP-237ENST00000479169 HBBP68871 147 aa6.5□□□□□ -1.37
HDLBP-237ENST00000479169 MRPS36P82909 103 aaKnown RBP6.5□□□□□ -1.37
HDLBP-237ENST00000479169 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
HDLBP-237ENST00000479169 A0A087X002 238 aa6.49□□□□□ -1.37
HDLBP-237ENST00000479169 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
HDLBP-237ENST00000479169 TRBV30A0A0K0K1B3 111 aa6.49□□□□□ -1.37
HDLBP-237ENST00000479169 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
HDLBP-237ENST00000479169 C20orf78Q9BR46 151 aa6.49□□□□□ -1.37
HDLBP-237ENST00000479169 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
HDLBP-237ENST00000479169 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
HDLBP-237ENST00000479169 ZNF727A8MUV8 499 aa6.48□□□□□ -1.37
HDLBP-237ENST00000479169 TCAPO15273 167 aa6.48□□□□□ -1.37
HDLBP-237ENST00000479169 TNFRSF6BO95407 300 aa6.48□□□□□ -1.37
HDLBP-237ENST00000479169 CKS2P33552 79 aa6.48□□□□□ -1.37
HDLBP-237ENST00000479169 RPL32P62910 135 aaKnown RBP6.48□□□□□ -1.37
HDLBP-237ENST00000479169 ALKAL2Q6UX46 152 aa6.48□□□□□ -1.37
HDLBP-237ENST00000479169 LINC00469Q8N7U9 141 aa6.48□□□□□ -1.37
HDLBP-237ENST00000479169 BLOC1S1P78537 153 aa6.47□□□□□ -1.37
HDLBP-237ENST00000479169 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
HDLBP-237ENST00000479169 TCTE3Q8IZS6 198 aa6.47□□□□□ -1.37
HDLBP-237ENST00000479169 PACRGQ96M98 296 aaPredicted RBP6.47□□□□□ -1.37
HDLBP-237ENST00000479169 EIF5A2Q9GZV4 153 aaKnown RBP6.47□□□□□ -1.37
HDLBP-237ENST00000479169 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
HDLBP-237ENST00000479169 LINC00862A6NCI5 91 aa6.46□□□□□ -1.38
HDLBP-237ENST00000479169 D6R8Y8 96 aa6.46□□□□□ -1.38
HDLBP-237ENST00000479169 NPYP01303 97 aa6.46□□□□□ -1.38
HDLBP-237ENST00000479169 RETNLBQ9BQ08 111 aa6.46□□□□□ -1.38
HDLBP-237ENST00000479169 CTDSP1Q9GZU7 261 aa6.46□□□□□ -1.38
HDLBP-237ENST00000479169 C22orf24Q9Y442 160 aa6.46□□□□□ -1.38
HDLBP-237ENST00000479169 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
HDLBP-237ENST00000479169 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
HDLBP-237ENST00000479169 NUPR1O60356 82 aa6.45□□□□□ -1.38
HDLBP-237ENST00000479169 SRP19P09132 144 aaKnown RBP6.45□□□□□ -1.38
HDLBP-237ENST00000479169 FAM74A3Q4VXF1 159 aa6.45□□□□□ -1.38
HDLBP-237ENST00000479169 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
HDLBP-237ENST00000479169 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
HDLBP-237ENST00000479169 SMIM27A0A1W2PRY6 76 aa6.44□□□□□ -1.38
HDLBP-237ENST00000479169 IFI27P40305 119 aaPredicted RBP6.44□□□□□ -1.38
HDLBP-237ENST00000479169 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
HDLBP-237ENST00000479169 ANAPC11Q9NYG5 84 aa6.44□□□□□ -1.38
HDLBP-237ENST00000479169 CRYGAP11844 174 aa6.43□□□□□ -1.38
HDLBP-237ENST00000479169 RPL23P62829 140 aaKnown RBP6.43□□□□□ -1.38
HDLBP-237ENST00000479169 ADIRFQ15847 76 aa6.43□□□□□ -1.38
HDLBP-237ENST00000479169 MRPL54Q6P161 138 aaKnown RBP6.43□□□□□ -1.38
HDLBP-237ENST00000479169 TMEM141Q96I45 108 aa6.43□□□□□ -1.38
HDLBP-237ENST00000479169 TOMM7Q9P0U1 55 aa6.43□□□□□ -1.38
HDLBP-237ENST00000479169 BCE1O60756 84 aa6.42□□□□□ -1.38
HDLBP-237ENST00000479169 RPL28P46779 137 aaKnown RBP6.42□□□□□ -1.38
HDLBP-237ENST00000479169 KRTAP13-2Q52LG2 175 aa6.42□□□□□ -1.38
HDLBP-237ENST00000479169 LBHQ53QV2 105 aaPredicted RBP6.42□□□□□ -1.38
HDLBP-237ENST00000479169 PYGO1Q9Y3Y4 419 aa6.42□□□□□ -1.38
HDLBP-237ENST00000479169 A0A1B0GW15 77 aa6.41□□□□□ -1.38
HDLBP-237ENST00000479169 PRSS2P07478 247 aa6.41□□□□□ -1.38
HDLBP-237ENST00000479169 CKS1BP61024 79 aa6.41□□□□□ -1.38
HDLBP-237ENST00000479169 TEX43Q6ZNM6 134 aa6.41□□□□□ -1.38
HDLBP-237ENST00000479169 LINC00173Q6ZV60 143 aa6.41□□□□□ -1.38
HDLBP-237ENST00000479169 MRPL55Q7Z7F7 128 aaKnown RBP6.41□□□□□ -1.38
HDLBP-237ENST00000479169 LINC01561Q8N1V8 128 aa6.41□□□□□ -1.38
HDLBP-237ENST00000479169 A0A1B0GXF2 115 aa6.4□□□□□ -1.38
HDLBP-237ENST00000479169 RPL37AP8A6NKH3 93 aa6.4□□□□□ -1.38
HDLBP-237ENST00000479169 F8W036 122 aa6.4□□□□□ -1.38
HDLBP-237ENST00000479169 RAB5AP20339 215 aa6.4□□□□□ -1.38
HDLBP-237ENST00000479169 TMA7Q9Y2S6 64 aaKnown RBP6.4□□□□□ -1.38
HDLBP-237ENST00000479169 C9JQL5 133 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 PPBPP02775 128 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 C6orf226Q5I0X4 101 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 Q6ZN92 141 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 Q8IZM0 81 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 PRELID3AQ96N28 172 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 C2orf88Q9BSF0 95 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 ALKBH7Q9BT30 221 aaPredicted RBP6.39□□□□□ -1.39
HDLBP-237ENST00000479169 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
HDLBP-237ENST00000479169 LOC389332A0A1B0GUA5 103 aa6.38□□□□□ -1.39
HDLBP-237ENST00000479169 GAGE10A6NGK3 116 aa6.38□□□□□ -1.39
HDLBP-237ENST00000479169 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms