RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 IGLV7-43P04211 117 aa8.08□□□□□ -1.12
VCL-205ENST00000478896 HBBP68871 147 aa8.08□□□□□ -1.12
VCL-205ENST00000478896 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
VCL-205ENST00000478896 FAM74A3Q4VXF1 159 aa8.08□□□□□ -1.12
VCL-205ENST00000478896 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
VCL-205ENST00000478896 SMIM2Q9BVW6 85 aa8.08□□□□□ -1.12
VCL-205ENST00000478896 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
VCL-205ENST00000478896 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
VCL-205ENST00000478896 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
VCL-205ENST00000478896 TNFRSF6BO95407 300 aa8.07□□□□□ -1.12
VCL-205ENST00000478896 RPL23P62829 140 aaKnown RBP8.07□□□□□ -1.12
VCL-205ENST00000478896 GAGE2EQ4V326 116 aa8.07□□□□□ -1.12
VCL-205ENST00000478896 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
VCL-205ENST00000478896 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
VCL-205ENST00000478896 GAGE2DQ9UEU5 116 aa8.07□□□□□ -1.12
VCL-205ENST00000478896 TRBV24-1A0A075B6N3 115 aa8.06□□□□□ -1.12
VCL-205ENST00000478896 TGIF2-C20orf24A0A0A6YYL0 155 aa8.06□□□□□ -1.12
VCL-205ENST00000478896 IGHV3OR16-9A0A0B4J2B5 98 aa8.06□□□□□ -1.12
VCL-205ENST00000478896 A0A1B0GW15 77 aa8.06□□□□□ -1.12
VCL-205ENST00000478896 D6R8Y8 96 aa8.06□□□□□ -1.12
VCL-205ENST00000478896 RPL32P62910 135 aaKnown RBP8.06□□□□□ -1.12
VCL-205ENST00000478896 UBE2BP63146 152 aa8.06□□□□□ -1.12
VCL-205ENST00000478896 SMIM27A0A1W2PRY6 76 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 F8W036 122 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 H0Y9J4 135 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 S100A8P05109 93 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 TLX1NBP0CAT3 122 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 IFI27P40305 119 aaPredicted RBP8.05□□□□□ -1.12
VCL-205ENST00000478896 MRPS36P82909 103 aaKnown RBP8.05□□□□□ -1.12
VCL-205ENST00000478896 C10orf25Q5T742 122 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 MRPL54Q6P161 138 aaKnown RBP8.05□□□□□ -1.12
VCL-205ENST00000478896 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 C6orf48Q9UBA6 75 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 NAT8Q9UHE5 227 aa8.05□□□□□ -1.12
VCL-205ENST00000478896 M0QXV9 152 aa8.04□□□□□ -1.12
VCL-205ENST00000478896 NPYP01303 97 aa8.04□□□□□ -1.12
VCL-205ENST00000478896 UBE2D1P51668 147 aa8.03□□□□□ -1.12
VCL-205ENST00000478896 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
VCL-205ENST00000478896 SMDT1Q9H4I9 107 aa8.03□□□□□ -1.12
VCL-205ENST00000478896 RAB5AP20339 215 aa8.02□□□□□ -1.13
VCL-205ENST00000478896 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
VCL-205ENST00000478896 IGLV1-50A0A075B6I6 118 aa8.01□□□□□ -1.13
VCL-205ENST00000478896 PPBPP02775 128 aa8.01□□□□□ -1.13
VCL-205ENST00000478896 PACRGQ96M98 296 aaPredicted RBP8.01□□□□□ -1.13
VCL-205ENST00000478896 TRBV30A0A0K0K1B3 111 aa8□□□□□ -1.13
VCL-205ENST00000478896 ORMDL3Q8N138 153 aa8□□□□□ -1.13
VCL-205ENST00000478896 TMEM141Q96I45 108 aa8□□□□□ -1.13
VCL-205ENST00000478896 LPAP08519 4548 aa7.99□□□□□ -1.13
VCL-205ENST00000478896 IGLV4-3A0A075B6K6 122 aa7.99□□□□□ -1.13
VCL-205ENST00000478896 A0A1B0GXF2 115 aa7.99□□□□□ -1.13
VCL-205ENST00000478896 PEA15Q15121 130 aa7.99□□□□□ -1.13
VCL-205ENST00000478896 LINC00242Q5T6M2 205 aa7.99□□□□□ -1.13
VCL-205ENST00000478896 C2orf82Q6UX34 121 aa7.99□□□□□ -1.13
VCL-205ENST00000478896 TEX43Q6ZNM6 134 aa7.99□□□□□ -1.13
VCL-205ENST00000478896 C9JQL5 133 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 NDUFC2-KCTD14E9PQ53 114 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 KRTAP1-4P0C5Y4 121 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 RPL13AP40429 203 aaKnown RBP7.98□□□□□ -1.13
VCL-205ENST00000478896 KIAA0087Q14695 138 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 TMEM136Q6ZRR5 245 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 PRELID3AQ96N28 172 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 C2orf88Q9BSF0 95 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 PYGO1Q9Y3Y4 419 aa7.98□□□□□ -1.13
VCL-205ENST00000478896 PRSS2P07478 247 aa7.97□□□□□ -1.13
VCL-205ENST00000478896 SRSF3P84103 164 aaKnown RBP7.97□□□□□ -1.13
VCL-205ENST00000478896 PRR4Q16378 134 aa7.97□□□□□ -1.13
VCL-205ENST00000478896 Q6ZN92 141 aa7.97□□□□□ -1.13
VCL-205ENST00000478896 KRTAP7-1Q8IUC3 87 aa7.97□□□□□ -1.13
VCL-205ENST00000478896 TOMM7Q9P0U1 55 aa7.97□□□□□ -1.13
VCL-205ENST00000478896 LOC389332A0A1B0GUA5 103 aa7.96□□□□□ -1.14
VCL-205ENST00000478896 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
VCL-205ENST00000478896 ATP5L2Q7Z4Y8 100 aa7.96□□□□□ -1.14
VCL-205ENST00000478896 MAP1LC3AQ9H492 121 aa7.96□□□□□ -1.14
VCL-205ENST00000478896 CKS1BP61024 79 aa7.95□□□□□ -1.14
VCL-205ENST00000478896 CYSLTR1Q9Y271 337 aa7.95□□□□□ -1.14
VCL-205ENST00000478896 C2orf66Q6UXQ4 117 aa7.94□□□□□ -1.14
VCL-205ENST00000478896 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
VCL-205ENST00000478896 LINC00469Q8N7U9 141 aa7.94□□□□□ -1.14
VCL-205ENST00000478896 LAMTOR2Q9Y2Q5 125 aa7.94□□□□□ -1.14
VCL-205ENST00000478896 ZC2HC1BQ5TFG8 222 aa7.93□□□□□ -1.14
VCL-205ENST00000478896 NUPR1O60356 82 aa7.92□□□□□ -1.14
VCL-205ENST00000478896 ZNF861PO60384 105 aa7.92□□□□□ -1.14
VCL-205ENST00000478896 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
VCL-205ENST00000478896 VCX2Q9H322 139 aa7.92□□□□□ -1.14
VCL-205ENST00000478896 CARHSP1Q9Y2V2 147 aaKnown RBP7.92□□□□□ -1.14
VCL-205ENST00000478896 Q8IZM0 81 aa7.91□□□□□ -1.14
VCL-205ENST00000478896 Q8N8P6 123 aa7.91□□□□□ -1.14
VCL-205ENST00000478896 ALKBH7Q9BT30 221 aaPredicted RBP7.91□□□□□ -1.14
VCL-205ENST00000478896 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
VCL-205ENST00000478896 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
VCL-205ENST00000478896 XAGE1AQ9HD64 81 aa7.91□□□□□ -1.14
VCL-205ENST00000478896 C22orf24Q9Y442 160 aa7.91□□□□□ -1.14
VCL-205ENST00000478896 PRSS47A8MTI9 375 aa7.9□□□□□ -1.14
VCL-205ENST00000478896 ORMDL2Q53FV1 153 aa7.9□□□□□ -1.14
VCL-205ENST00000478896 LBHQ53QV2 105 aaPredicted RBP7.9□□□□□ -1.14
VCL-205ENST00000478896 LINC00173Q6ZV60 143 aa7.9□□□□□ -1.14
VCL-205ENST00000478896 AMELXQ99217 191 aa7.9□□□□□ -1.14
VCL-205ENST00000478896 CTDSP1Q9GZU7 261 aa7.9□□□□□ -1.14
VCL-205ENST00000478896 HERVK_113P63121 156 aa7.89□□□□□ -1.15
VCL-205ENST00000478896 TSPAN13O95857 204 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms