RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZNF705FA8MVS1 300 aaPredicted RBP2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 IGLL5B9A064 214 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 H3BMM0 161 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 K7ERU9 68 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF705DP0CH99 300 aaPredicted RBP2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF705BP0CI00 300 aaPredicted RBP2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 INAFM2P0DMQ5 153 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF90Q03938 601 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 CD164Q04900 197 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 LGALS9CQ6DKI2 356 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 SMIM15Q7Z3B0 74 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 SPATA12Q7Z6I5 190 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 BAGE3Q86Y29 109 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 BAGE2Q86Y30 109 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 BOD1L2Q8IYS8 172 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 OR8I2Q8N0Y5 310 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 GATD1Q8NB37 220 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 OR11H2Q8NH07 326 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 CHCHD1Q96BP2 118 aaKnown RBP2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 ODF3Q96PU9 254 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 SHANK2-AS3Q9BTD1 123 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 PRO1933Q9H354 126 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 RBM12B-AS1Q9P1G2 102 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 HIGD1AQ9Y241 93 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 V9GYV3 84 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 RYR2Q92736 4967 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 UBE2L5PA0A1B0GUS4 154 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 PGPA6NDG6 321 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 KNCNA6PVL3 124 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 HSBP1L1C9JCN9 74 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 HYPMO75409 117 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 SMIM17P0DL12 118 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 HIST1H1EP10412 219 aaKnown RBP2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 SCGB1A1P11684 91 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 GCHFRP30047 84 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 TSPOP30536 169 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 GNG4P50150 75 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 FOXA3P55318 350 aaPredicted RBP2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 SEC11AP67812 179 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 PSG9Q00887 426 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 PDE6HQ13956 83 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 PDZD11Q5EBL8 140 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 FAM78BQ5VT40 261 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 Q6AWC8 147 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 EBLN2Q6P2I7 272 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 AMTNQ6UX39 209 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 BPIFA4PQ86YQ2 179 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 OR10AG1Q8NH19 301 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 BORCS7Q96B45 105 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 FMC1Q96HJ9 113 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 IGF2BP2-AS1Q96M15 143 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 MGST2Q99735 147 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 TMEM14CQ9P0S9 112 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF492Q9P255 531 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 NAT8BQ9UHF3 227 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 VPS13DQ5THJ4 4388 aa2.05□□□□□ -2.08
CDC42BPA-212ENST00000478573 TRBV20OR9-2A0A075B6H5 130 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 TRAV8-2A0A0B4J237 113 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 C7orf71A4D174 169 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 ARL14EPLP0DKL9 152 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 ORM2P19652 201 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 HIST1H1AQ02539 215 aaPredicted RBP2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 RRN3P1Q2M238 152 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 SPATA45Q537H7 98 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 GDF5OSQ5U4N7 250 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 C10orf113Q5VZT2 155 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 PATE2Q6UY27 113 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 GTF2H5Q6ZYL4 71 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 LINC00305Q7Z4B0 112 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 C15orf53Q8NAA6 179 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 OR5A1Q8NGJ0 315 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 TSKUQ8WUA8 353 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 TMEM70Q9BUB7 260 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 TMEM191AQ9H0A3 160 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 SPANXA1Q9NS26 97 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 HSPB8Q9UJY1 196 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 APLNQ9ULZ1 77 aa2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF706Q9Y5V0 76 aaPredicted RBP2.04□□□□□ -2.08
CDC42BPA-212ENST00000478573 RYR3Q15413 4870 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 DEFB131BA0A096LNP1 70 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 A0A1B0GV50 99 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 RBAKDNA6NC62 111 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 LINC01549A6NIU2 74 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 SLC17A3O00476 420 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 CCL25O15444 150 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 SLC25A5P05141 298 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 C3orf79P0CE67 100 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 SPART-AS1P0CW21 52 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 SCGB1C2P0DMR2 95 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 P0DMU3 169 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 FAM231AP0DMU4 169 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 FAM231CP0DMU5 169 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 HLA-DMBP28068 263 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 CSN1S1P47710 185 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 ATP5G3P48201 142 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 UBE2G1P62253 170 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 HBBP68871 147 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 SPINK13Q1W4C9 94 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 C12orf74Q32Q52 190 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms