RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 RNF151Q2KHN1 245 aa9.01□□□□□ -0.97
SMARCE1-209ENST00000478349 RNASE13Q5GAN3 156 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-209ENST00000478349 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
SMARCE1-209ENST00000478349 A0A0J9YXV3 536 aa9□□□□□ -0.97
SMARCE1-209ENST00000478349 TNFRSF6BO95407 300 aa9□□□□□ -0.97
SMARCE1-209ENST00000478349 C5orf38Q86SI9 138 aa9□□□□□ -0.97
SMARCE1-209ENST00000478349 RAB5AP20339 215 aa8.99□□□□□ -0.97
SMARCE1-209ENST00000478349 IMMP2LQ96T52 175 aa8.99□□□□□ -0.97
SMARCE1-209ENST00000478349 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
SMARCE1-209ENST00000478349 IFITM10A6NMD0 228 aa8.98□□□□□ -0.97
SMARCE1-209ENST00000478349 D6R8Y8 96 aa8.98□□□□□ -0.97
SMARCE1-209ENST00000478349 NDUFA1O15239 70 aa8.98□□□□□ -0.97
SMARCE1-209ENST00000478349 MT-ND6P03923 174 aa8.98□□□□□ -0.97
SMARCE1-209ENST00000478349 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-209ENST00000478349 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-209ENST00000478349 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-209ENST00000478349 MRPL54Q6P161 138 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-209ENST00000478349 ATP5L2Q7Z4Y8 100 aa8.97□□□□□ -0.97
SMARCE1-209ENST00000478349 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
SMARCE1-209ENST00000478349 ORAOV1Q8WV07 137 aa8.97□□□□□ -0.97
SMARCE1-209ENST00000478349 MRPL35Q9NZE8 188 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-209ENST00000478349 RPL39P62891 51 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-209ENST00000478349 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-209ENST00000478349 LAMTOR2Q9Y2Q5 125 aa8.95□□□□□ -0.98
SMARCE1-209ENST00000478349 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
SMARCE1-209ENST00000478349 A0A1B0GXF2 115 aa8.94□□□□□ -0.98
SMARCE1-209ENST00000478349 NPYP01303 97 aa8.94□□□□□ -0.98
SMARCE1-209ENST00000478349 SRSF9Q13242 221 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMARCE1-209ENST00000478349 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
SMARCE1-209ENST00000478349 C9JQL5 133 aa8.93□□□□□ -0.98
SMARCE1-209ENST00000478349 TMEM136Q6ZRR5 245 aa8.93□□□□□ -0.98
SMARCE1-209ENST00000478349 PRELID3AQ96N28 172 aa8.93□□□□□ -0.98
SMARCE1-209ENST00000478349 A0A1W2PNN7 141 aa8.92□□□□□ -0.98
SMARCE1-209ENST00000478349 Q6ZN92 141 aa8.92□□□□□ -0.98
SMARCE1-209ENST00000478349 OPRPNQ99935 248 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-209ENST00000478349 C2orf88Q9BSF0 95 aa8.92□□□□□ -0.98
SMARCE1-209ENST00000478349 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
SMARCE1-209ENST00000478349 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
SMARCE1-209ENST00000478349 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 KRTAP10-8P60410 259 aa8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 SRSF3P84103 164 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 PNRC1Q12796 327 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 C1orf137Q5JT78 98 aa8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 TEX43Q6ZNM6 134 aa8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 DIRC1Q969H9 104 aa8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 MAP1LC3AQ9H492 121 aa8.91□□□□□ -0.98
SMARCE1-209ENST00000478349 A0A087WZ39 114 aa8.9□□□□□ -0.98
SMARCE1-209ENST00000478349 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-209ENST00000478349 TRBV30A0A0K0K1B3 111 aa8.89□□□□□ -0.99
SMARCE1-209ENST00000478349 MT-ND4LP03901 98 aa8.89□□□□□ -0.99
SMARCE1-209ENST00000478349 CYSLTR1Q9Y271 337 aa8.89□□□□□ -0.99
SMARCE1-209ENST00000478349 K7EMI3 77 aa8.88□□□□□ -0.99
SMARCE1-209ENST00000478349 NPSP0C0P6 89 aa8.88□□□□□ -0.99
SMARCE1-209ENST00000478349 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
SMARCE1-209ENST00000478349 PAPPA-AS1Q5QFB9 102 aa8.88□□□□□ -0.99
SMARCE1-209ENST00000478349 PHF5AQ7RTV0 110 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-209ENST00000478349 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
SMARCE1-209ENST00000478349 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
SMARCE1-209ENST00000478349 PRSS2P07478 247 aa8.87□□□□□ -0.99
SMARCE1-209ENST00000478349 G0S2P27469 103 aa8.87□□□□□ -0.99
SMARCE1-209ENST00000478349 UNQ6190/PRO20217Q6UXQ8 127 aa8.87□□□□□ -0.99
SMARCE1-209ENST00000478349 FAM19A5Q7Z5A7 132 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-209ENST00000478349 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
SMARCE1-209ENST00000478349 C6orf48Q9UBA6 75 aa8.87□□□□□ -0.99
SMARCE1-209ENST00000478349 A6NJY4 79 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 PRSS47A8MTI9 375 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 RAB14P61106 215 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 UBE2BP63146 152 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 SEC11AP67812 179 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 GAGE2EQ4V326 116 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 LINC00242Q5T6M2 205 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 GAGE2DQ9UEU5 116 aa8.86□□□□□ -0.99
SMARCE1-209ENST00000478349 A0A1B0GVG6 124 aa8.85□□□□□ -0.99
SMARCE1-209ENST00000478349 NDUFC2-KCTD14E9PQ53 114 aa8.85□□□□□ -0.99
SMARCE1-209ENST00000478349 M0QXV9 152 aa8.85□□□□□ -0.99
SMARCE1-209ENST00000478349 ODF1Q14990 250 aa8.85□□□□□ -0.99
SMARCE1-209ENST00000478349 C2orf66Q6UXQ4 117 aa8.85□□□□□ -0.99
SMARCE1-209ENST00000478349 Q8N8P6 123 aa8.85□□□□□ -0.99
SMARCE1-209ENST00000478349 VCX2Q9H322 139 aa8.85□□□□□ -0.99
SMARCE1-209ENST00000478349 LOC389332A0A1B0GUA5 103 aa8.84□□□□□ -0.99
SMARCE1-209ENST00000478349 CKS1BP61024 79 aa8.84□□□□□ -0.99
SMARCE1-209ENST00000478349 C10orf25Q5T742 122 aa8.84□□□□□ -0.99
SMARCE1-209ENST00000478349 NXT2Q9NPJ8 142 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-209ENST00000478349 H0Y9J4 135 aa8.83□□□□□ -1
SMARCE1-209ENST00000478349 UBE2D1P51668 147 aa8.83□□□□□ -1
SMARCE1-209ENST00000478349 KIAA0087Q14695 138 aa8.82□□□□□ -1
SMARCE1-209ENST00000478349 CTDSP1Q9GZU7 261 aa8.82□□□□□ -1
SMARCE1-209ENST00000478349 IGLV1-50A0A075B6I6 118 aa8.81□□□□□ -1
SMARCE1-209ENST00000478349 FAM168BA1KXE4 195 aa8.81□□□□□ -1
SMARCE1-209ENST00000478349 HERVK_113P63121 156 aa8.81□□□□□ -1
SMARCE1-209ENST00000478349 C6orf226Q5I0X4 101 aa8.81□□□□□ -1
SMARCE1-209ENST00000478349 RPL13AP40429 203 aaKnown RBP8.8□□□□□ -1
SMARCE1-209ENST00000478349 C2orf82Q6UX34 121 aa8.8□□□□□ -1
SMARCE1-209ENST00000478349 Q8IZM0 81 aa8.8□□□□□ -1
SMARCE1-209ENST00000478349 AMELXQ99217 191 aa8.8□□□□□ -1
SMARCE1-209ENST00000478349 GEMIN7Q9H840 131 aaKnown RBP8.8□□□□□ -1
SMARCE1-209ENST00000478349 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms