RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 IGLV4-3A0A075B6K6 122 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 GCSHP23434 173 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 ZNF664Q8N3J9 261 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
PTPN7-209ENST00000477554 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
PTPN7-209ENST00000477554 VCX2Q9H322 139 aa11.59□□□□□ -0.55
PTPN7-209ENST00000477554 VPS13BQ7Z7G8 4022 aa11.58□□□□□ -0.56
PTPN7-209ENST00000477554 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.56
PTPN7-209ENST00000477554 Q6ZUT4 128 aa11.58□□□□□ -0.56
PTPN7-209ENST00000477554 MAP1LC3CQ9BXW4 147 aa11.58□□□□□ -0.56
PTPN7-209ENST00000477554 PRSS1P07477 247 aa11.57□□□□□ -0.56
PTPN7-209ENST00000477554 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
PTPN7-209ENST00000477554 LINC00173Q6ZV60 143 aa11.57□□□□□ -0.56
PTPN7-209ENST00000477554 NTN5Q8WTR8 489 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-209ENST00000477554 OPRPNQ99935 248 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-209ENST00000477554 Q8N1X5 172 aa11.56□□□□□ -0.56
PTPN7-209ENST00000477554 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
PTPN7-209ENST00000477554 AMELXQ99217 191 aa11.56□□□□□ -0.56
PTPN7-209ENST00000477554 C2orf88Q9BSF0 95 aa11.56□□□□□ -0.56
PTPN7-209ENST00000477554 PRR34Q9NV39 138 aa11.56□□□□□ -0.56
PTPN7-209ENST00000477554 IGLV10-54A0A075B6I4 117 aa11.55□□□□□ -0.56
PTPN7-209ENST00000477554 IFITM10A6NMD0 228 aa11.55□□□□□ -0.56
PTPN7-209ENST00000477554 PMVKQ15126 192 aa11.55□□□□□ -0.56
PTPN7-209ENST00000477554 CRPP02741 224 aa11.54□□□□□ -0.56
PTPN7-209ENST00000477554 SMR3BP02814 79 aaPredicted RBP11.54□□□□□ -0.56
PTPN7-209ENST00000477554 RNASE13Q5GAN3 156 aaKnown RBP11.54□□□□□ -0.56
PTPN7-209ENST00000477554 C1orf43Q9BWL3 253 aa11.54□□□□□ -0.56
PTPN7-209ENST00000477554 REG3AQ06141 175 aa11.53□□□□□ -0.56
PTPN7-209ENST00000477554 TRAV12-1A0A0B4J245 112 aa11.52□□□□□ -0.56
PTPN7-209ENST00000477554 RMI2Q96E14 147 aa11.52□□□□□ -0.56
PTPN7-209ENST00000477554 CST9LQ9H4G1 147 aa11.52□□□□□ -0.56
PTPN7-209ENST00000477554 CCL25O15444 150 aa11.52□□□□□ -0.57
PTPN7-209ENST00000477554 C3orf79P0CE67 100 aa11.52□□□□□ -0.57
PTPN7-209ENST00000477554 KRTDAPP60985 99 aa11.52□□□□□ -0.57
PTPN7-209ENST00000477554 IGKV3OR2-268A0A0C4DH90 116 aa11.51□□□□□ -0.57
PTPN7-209ENST00000477554 H0Y8G0 127 aa11.51□□□□□ -0.57
PTPN7-209ENST00000477554 SYS1-DBNDD2H3BUS1 97 aa11.51□□□□□ -0.57
PTPN7-209ENST00000477554 PET117Q6UWS5 81 aa11.51□□□□□ -0.57
PTPN7-209ENST00000477554 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
PTPN7-209ENST00000477554 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
PTPN7-209ENST00000477554 SS18Q15532 418 aa11.5□□□□□ -0.57
PTPN7-209ENST00000477554 MIAQ16674 131 aa11.5□□□□□ -0.57
PTPN7-209ENST00000477554 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
PTPN7-209ENST00000477554 OR10D4PQ8NGN7 298 aa11.5□□□□□ -0.57
PTPN7-209ENST00000477554 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
PTPN7-209ENST00000477554 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
PTPN7-209ENST00000477554 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
PTPN7-209ENST00000477554 UBE2D1P51668 147 aa11.49□□□□□ -0.57
PTPN7-209ENST00000477554 SEC11AP67812 179 aa11.49□□□□□ -0.57
PTPN7-209ENST00000477554 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
PTPN7-209ENST00000477554 C20orf202A1L168 122 aa11.47□□□□□ -0.57
PTPN7-209ENST00000477554 ODF1Q14990 250 aa11.47□□□□□ -0.57
PTPN7-209ENST00000477554 FAM19A3Q7Z5A8 133 aa11.47□□□□□ -0.57
PTPN7-209ENST00000477554 F8VRH5 84 aa11.46□□□□□ -0.57
PTPN7-209ENST00000477554 Q6ZSA8 131 aa11.46□□□□□ -0.57
PTPN7-209ENST00000477554 AKR1D1P51857 326 aa11.45□□□□□ -0.58
PTPN7-209ENST00000477554 LINC01545Q5VT33 79 aa11.45□□□□□ -0.58
PTPN7-209ENST00000477554 TINCRA0A1B0GVN0 87 aa11.44□□□□□ -0.58
PTPN7-209ENST00000477554 HERVK_113P63121 156 aa11.44□□□□□ -0.58
PTPN7-209ENST00000477554 LINC00242Q5T6M2 205 aa11.44□□□□□ -0.58
PTPN7-209ENST00000477554 Q5VSD8 79 aa11.44□□□□□ -0.58
PTPN7-209ENST00000477554 MRPL35Q9NZE8 188 aaKnown RBP11.44□□□□□ -0.58
PTPN7-209ENST00000477554 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
PTPN7-209ENST00000477554 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
PTPN7-209ENST00000477554 PLNP26678 52 aa11.43□□□□□ -0.58
PTPN7-209ENST00000477554 CHCHD10Q8WYQ3 142 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-209ENST00000477554 GEMIN7Q9H840 131 aaKnown RBP11.43□□□□□ -0.58
PTPN7-209ENST00000477554 SRRM2Q9UQ35 2752 aaKnown RBP11.43□□□□□ -0.58
PTPN7-209ENST00000477554 IGLV4-69A0A075B6H9 119 aa11.43□□□□□ -0.58
PTPN7-209ENST00000477554 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
PTPN7-209ENST00000477554 DPM2O94777 84 aa11.43□□□□□ -0.58
PTPN7-209ENST00000477554 CD164L2Q6UWJ8 174 aa11.43□□□□□ -0.58
PTPN7-209ENST00000477554 SLPIP03973 132 aa11.42□□□□□ -0.58
PTPN7-209ENST00000477554 XCL1P47992 114 aa11.42□□□□□ -0.58
PTPN7-209ENST00000477554 CHAC1Q9BUX1 264 aa11.42□□□□□ -0.58
PTPN7-209ENST00000477554 GAGE12HA6NDE8 117 aa11.41□□□□□ -0.58
PTPN7-209ENST00000477554 SCGB1D1O95968 90 aa11.41□□□□□ -0.58
PTPN7-209ENST00000477554 IGKCP01834 107 aa11.41□□□□□ -0.58
PTPN7-209ENST00000477554 PMCHL2Q9BQD1 86 aa11.41□□□□□ -0.58
PTPN7-209ENST00000477554 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
PTPN7-209ENST00000477554 PANO1I0J062 215 aa11.4□□□□□ -0.58
PTPN7-209ENST00000477554 COX6A2Q02221 97 aa11.4□□□□□ -0.58
PTPN7-209ENST00000477554 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
PTPN7-209ENST00000477554 IGHV3OR16-9A0A0B4J2B5 98 aa11.39□□□□□ -0.59
PTPN7-209ENST00000477554 C11orf86A6NJI1 115 aa11.39□□□□□ -0.59
PTPN7-209ENST00000477554 JOSD1Q15040 202 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-209ENST00000477554 LINC00469Q8N7U9 141 aa11.39□□□□□ -0.59
PTPN7-209ENST00000477554 C15orf56Q8N910 161 aa11.39□□□□□ -0.59
PTPN7-209ENST00000477554 IGLV5-45A0A087WSX0 123 aa11.38□□□□□ -0.59
PTPN7-209ENST00000477554 LOC105371267A0A1B0GV96 52 aa11.38□□□□□ -0.59
PTPN7-209ENST00000477554 H3BRM9 83 aa11.37□□□□□ -0.59
PTPN7-209ENST00000477554 FOXI1Q12951 378 aa11.37□□□□□ -0.59
PTPN7-209ENST00000477554 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
PTPN7-209ENST00000477554 CDKN2A-AS1Q9UH64 79 aa11.37□□□□□ -0.59
PTPN7-209ENST00000477554 hDV102S1A0JD36 115 aa11.36□□□□□ -0.59
PTPN7-209ENST00000477554 COX7A2LO14548 114 aa11.36□□□□□ -0.59
PTPN7-209ENST00000477554 ZNF22P17026 224 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-209ENST00000477554 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms