RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 IMMP2LQ96T52 175 aa7.97□□□□□ -1.13
GAPDH-208ENST00000474249 CSDC2Q9Y534 153 aaKnown RBP7.97□□□□□ -1.13
GAPDH-208ENST00000474249 V9GYV3 84 aa7.97□□□□□ -1.13
GAPDH-208ENST00000474249 TRBV24-1A0A075B6N3 115 aa7.96□□□□□ -1.14
GAPDH-208ENST00000474249 C1orf196B1AJZ1 125 aa7.96□□□□□ -1.14
GAPDH-208ENST00000474249 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
GAPDH-208ENST00000474249 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
GAPDH-208ENST00000474249 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
GAPDH-208ENST00000474249 COX7A2LO14548 114 aa7.95□□□□□ -1.14
GAPDH-208ENST00000474249 CAMK2N2Q96S95 79 aa7.95□□□□□ -1.14
GAPDH-208ENST00000474249 OPRPNQ99935 248 aaPredicted RBP7.95□□□□□ -1.14
GAPDH-208ENST00000474249 TGIF2-C20orf24A0A0A6YYL0 155 aa7.94□□□□□ -1.14
GAPDH-208ENST00000474249 RAB5AP20339 215 aa7.94□□□□□ -1.14
GAPDH-208ENST00000474249 S100PP25815 95 aa7.94□□□□□ -1.14
GAPDH-208ENST00000474249 FAM104AQ969W3 186 aa7.94□□□□□ -1.14
GAPDH-208ENST00000474249 ST20Q9HBF5 79 aa7.94□□□□□ -1.14
GAPDH-208ENST00000474249 UBE2D4Q9Y2X8 147 aa7.94□□□□□ -1.14
GAPDH-208ENST00000474249 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
GAPDH-208ENST00000474249 SMIM15Q7Z3B0 74 aa7.93□□□□□ -1.14
GAPDH-208ENST00000474249 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
GAPDH-208ENST00000474249 TRAV9-1A0A075B6T8 112 aa7.92□□□□□ -1.14
GAPDH-208ENST00000474249 GATCO43716 136 aaKnown RBP7.92□□□□□ -1.14
GAPDH-208ENST00000474249 RAB4AP20338 218 aa7.92□□□□□ -1.14
GAPDH-208ENST00000474249 MALP21145 153 aa7.92□□□□□ -1.14
GAPDH-208ENST00000474249 CT83Q5H943 113 aa7.92□□□□□ -1.14
GAPDH-208ENST00000474249 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
GAPDH-208ENST00000474249 TMEM191AQ9H0A3 160 aa7.92□□□□□ -1.14
GAPDH-208ENST00000474249 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
GAPDH-208ENST00000474249 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
GAPDH-208ENST00000474249 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
GAPDH-208ENST00000474249 RPL18AQ02543 176 aaKnown RBP7.91□□□□□ -1.14
GAPDH-208ENST00000474249 A0A087WZ39 114 aa7.9□□□□□ -1.14
GAPDH-208ENST00000474249 RNASE13Q5GAN3 156 aaKnown RBP7.9□□□□□ -1.14
GAPDH-208ENST00000474249 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
GAPDH-208ENST00000474249 TRAV13-1A0A0B4J241 112 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 IGHV3OR16-9A0A0B4J2B5 98 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 A8MWL6 223 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 F8WDY8 70 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 VCYO14598 125 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 SPAG11BQ08648 103 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 PRR4Q16378 134 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 NRACQ8N912 160 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 OR10D4PQ8NGN7 298 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 TSKUQ8WUA8 353 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 TIMM21Q9BVV7 248 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
GAPDH-208ENST00000474249 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
GAPDH-208ENST00000474249 UNQ6190/PRO20217Q6UXQ8 127 aa7.87□□□□□ -1.15
GAPDH-208ENST00000474249 Q6ZUT4 128 aa7.87□□□□□ -1.15
GAPDH-208ENST00000474249 AMN1Q8IY45 258 aa7.87□□□□□ -1.15
GAPDH-208ENST00000474249 C6orf48Q9UBA6 75 aa7.87□□□□□ -1.15
GAPDH-208ENST00000474249 A0A1B0GUT8 65 aa7.86□□□□□ -1.15
GAPDH-208ENST00000474249 SMKR1H3BMG3 65 aa7.86□□□□□ -1.15
GAPDH-208ENST00000474249 RAB5BP61020 215 aa7.86□□□□□ -1.15
GAPDH-208ENST00000474249 NAT8BQ9UHF3 227 aa7.86□□□□□ -1.15
GAPDH-208ENST00000474249 HIGD1CA8MV81 97 aa7.85□□□□□ -1.15
GAPDH-208ENST00000474249 TRGC2P03986 189 aa7.85□□□□□ -1.15
GAPDH-208ENST00000474249 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
GAPDH-208ENST00000474249 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
GAPDH-208ENST00000474249 KIAA0087Q14695 138 aa7.85□□□□□ -1.15
GAPDH-208ENST00000474249 A0A1B0GXF2 115 aa7.84□□□□□ -1.15
GAPDH-208ENST00000474249 COX19Q49B96 90 aa7.84□□□□□ -1.15
GAPDH-208ENST00000474249 FAM19A5Q7Z5A7 132 aaPredicted RBP7.84□□□□□ -1.15
GAPDH-208ENST00000474249 ORAOV1Q8WV07 137 aa7.84□□□□□ -1.15
GAPDH-208ENST00000474249 NDUFA1O15239 70 aa7.83□□□□□ -1.16
GAPDH-208ENST00000474249 FCER1GP30273 86 aa7.83□□□□□ -1.16
GAPDH-208ENST00000474249 SMAGPQ0VAQ4 97 aa7.83□□□□□ -1.16
GAPDH-208ENST00000474249 ATP5L2Q7Z4Y8 100 aa7.83□□□□□ -1.16
GAPDH-208ENST00000474249 GNB1LQ9BYB4 327 aa7.83□□□□□ -1.16
GAPDH-208ENST00000474249 C9orf129Q5T035 196 aaKnown RBP7.82□□□□□ -1.16
GAPDH-208ENST00000474249 MRPL54Q6P161 138 aaKnown RBP7.82□□□□□ -1.16
GAPDH-208ENST00000474249 TMEM136Q6ZRR5 245 aa7.82□□□□□ -1.16
GAPDH-208ENST00000474249 LOC105371267A0A1B0GV96 52 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BKO60814 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 PPP1R17O96001 155 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BJP06899 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BOP23527 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BBP33778 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 UBE2D1P51668 147 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BDP58876 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BCP62807 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
GAPDH-208ENST00000474249 RPL32P62910 135 aaKnown RBP7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST2H2BEQ16778 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BHQ93079 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 KIR2DL4Q99706 377 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BNQ99877 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 HIST1H2BMQ99879 126 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 TRAPPC1Q9Y5R8 145 aa7.81□□□□□ -1.16
GAPDH-208ENST00000474249 M0QXV9 152 aa7.8□□□□□ -1.16
GAPDH-208ENST00000474249 ZNF861PO60384 105 aa7.8□□□□□ -1.16
GAPDH-208ENST00000474249 MRPS36P82909 103 aaKnown RBP7.8□□□□□ -1.16
GAPDH-208ENST00000474249 FABP9Q0Z7S8 132 aa7.8□□□□□ -1.16
GAPDH-208ENST00000474249 BORCS7Q96B45 105 aa7.8□□□□□ -1.16
GAPDH-208ENST00000474249 HBBP68871 147 aa7.79□□□□□ -1.16
GAPDH-208ENST00000474249 MRPL51Q4U2R6 128 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms