RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 Q8N814 137 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 C9orf106Q8NAJ2 232 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 LINC00574Q9H8X3 128 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 CPAMD8Q8IZJ3 1885 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 IGLV4-3A0A075B6K6 122 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 IGLV3-32A0A0A0MS00 114 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 IGHV3-21A0A0B4J1V1 117 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 F8WEM9 126 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 K7ERS5 55 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 IGLV1-51P01701 117 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 UBE2D1P51668 147 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 MIAQ16674 131 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 CLECL1Q8IZS7 167 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 MAPK1IP1LQ8NDC0 245 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 DSCAMO60469 2012 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 IGHV5-10-1A0A0J9YXX1 117 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 CISD3P0C7P0 127 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 ZNF22P17026 224 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 ZNF117Q03924 483 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 C15orf32Q32M92 178 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 FAM229BQ4G0N7 80 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 KPRPQ5T749 579 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 MUC7Q8TAX7 377 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 LINC00476Q8WZB0 136 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 PROK2Q9HC23 129 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 AGRNO00468 2067 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 PLXNB1O43157 2135 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 IGLV8-61A0A075B6I0 122 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 PPYP01298 95 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 C2orf66Q6UXQ4 117 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 ZNF414Q96IQ9 312 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 TXNDC17Q9BRA2 123 aa4.18□□□□□ -1.74
SMARCE1-208ENST00000474246 IGKV2D-26A0A0A0MRZ7 120 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 IGHV7-4-1A0A0J9YVY3 117 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 C17orf51A8MQB3 221 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 SOCS3O14543 225 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 Q8IYB0 196 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 SMCR5Q8TEV8 140 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 C7orf33Q8WU49 177 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 CCL19Q99731 98 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 DOCK11Q5JSL3 2073 aa4.17□□□□□ -1.74
SMARCE1-208ENST00000474246 IGLV5-39A0A0G2JS06 123 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 TMEM223A0PJW6 202 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 RNASE13Q5GAN3 156 aaKnown RBP4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 ZNF826PQ6ZT77 177 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 TMEM190Q8WZ59 177 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 DHRS4-AS1Q9P1J3 65 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 B4DSR2 109 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 C2orf82Q6UX34 121 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 UBE2D4Q9Y2X8 147 aa4.16□□□□□ -1.74
SMARCE1-208ENST00000474246 MUC2Q02817 5179 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 IGHV3-49A0A0A0MS15 119 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 SPTY2D1-AS1A0A0U1RR47 76 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 E7EUB6 86 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 SH2D1AO60880 128 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 MSMBP08118 114 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 ROMO1P60602 79 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 LIMD2Q9BT23 127 aa4.15□□□□□ -1.74
SMARCE1-208ENST00000474246 KIAA1549Q9HCM3 1950 aa4.15□□□□□ -1.75
SMARCE1-208ENST00000474246 SDHAF1A6NFY7 115 aa4.15□□□□□ -1.75
SMARCE1-208ENST00000474246 ERC2-IT1O76042 136 aa4.15□□□□□ -1.75
SMARCE1-208ENST00000474246 STATHP02808 62 aa4.15□□□□□ -1.75
SMARCE1-208ENST00000474246 EDDM3BP56851 147 aa4.15□□□□□ -1.75
SMARCE1-208ENST00000474246 ZNF818PQ6ZRF7 136 aa4.15□□□□□ -1.75
SMARCE1-208ENST00000474246 C20orf203Q8NBC4 194 aa4.15□□□□□ -1.75
SMARCE1-208ENST00000474246 A6NED7 52 aa4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 LY6HO94772 140 aa4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 IGLV3-25P01717 112 aa4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 MGST1P10620 155 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 RPL28P46779 137 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 C10orf25Q5T742 122 aa4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 SFTA2Q6UW10 78 aa4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 CHCHD7Q9BUK0 85 aa4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 CADP27708 2225 aa4.14□□□□□ -1.75
SMARCE1-208ENST00000474246 ZNF815PA8K554 130 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 COX6CP09669 75 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 C1orf134Q5TEV5 83 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 Q8NDZ9 215 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 PSENENQ9NZ42 101 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 Q5VV11 94 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 DYNAPQ8N1N2 210 aa4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 C1orf147Q96MC9 270 aaPredicted RBP4.13□□□□□ -1.75
SMARCE1-208ENST00000474246 IGHV3-66A0A0C4DH42 116 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 A8MWP4 228 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 CRPP02741 224 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 SPINT3P49223 89 aa4.12□□□□□ -1.75
SMARCE1-208ENST00000474246 RPL36AP83881 106 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms